KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:28 2014 Check: 00 .. Name: ENSP00000361278/1-177 Len: 206 Check: 6920 Weight: 1.00 Name: ENSBTAP00000043925/1-175 Len: 206 Check: 4321 Weight: 1.00 Name: bmy_17712T0/1-131 Len: 206 Check: 546 Weight: 1.00 Name: ENSTTRP00000015535/1-176 Len: 206 Check: 6746 Weight: 1.00 Name: BACU007201/1-176 Len: 206 Check: 7123 Weight: 1.00 // 1 50 ENSP00000361278/1-177 MESIYLQKHL GACLTQGLAE VARVRPVDPI EYLALWIYKY KENVTMEQLR ENSBTAP00000043925/1-175 MESAYLHKFL GTCLTEGLAE LARMRPVDPI EYLALWIYKY KKNVTMEKQR bmy_17712T0/1-131 --MTYL---- ---------- ---------- ---------- ---------- ENSTTRP00000015535/1-176 MESAYLQKNL GTCLTQGLAE VARMRPVDPI EYLALWIYNY KNNVTMEQQR BACU007201/1-176 MESAYLQKNL GTCLTQGLAE VARMRPVDPI EYLALWIYKY KNNVTVEQRR 51 100 ENSP00000361278/1-177 QKEMAKLERE RELALMEQEM MERLKAEELL LQQQQLALQL ELEMQEKERQ ENSBTAP00000043925/1-175 QEEMAQLEHE REVALMEQEM MERLRAEELL FQQQQLEFQL ELEEQEKERQ bmy_17712T0/1-131 ---------- ---------- --------FL NIQQQLAFQL ELEMQEKERQ ENSTTRP00000015535/1-176 QEEMAQLEQE RELAVMEQEM MERLKAEEFL FQQQQLAFQL ELEMQEKERQ BACU007201/1-176 QEEMAQLEHE RELAVMEQEM MERLKAEELL FQQQQLAFQL ELEMQEKERQ 101 150 ENSP00000361278/1-177 RIQELQRAQE QLGKEMRMNM ENLVRNEDIL HSEEATLDSG KTLAEISDRY ENSBTAP00000043925/1-175 RIEELERAQE QFEKELRMSM ENMAK-EDTL HGEDGA-DSG KTLAEISDRY bmy_17712T0/1-131 RIEELQRAQE QFEKELRMSM ENIAKGEDIS HGEDGA-DSG KTLAEISDRY ENSTTRP00000015535/1-176 RIEELQRAQE QLEKELRMNM ESIAKGEDIS HGEDEA-DSG RTLAEISDRY BACU007201/1-176 RIEELQRAQE QFEKELRISM ENIAKGEDIS HGEDGT-DSG KTLAEISDRY 151 200 ENSP00000361278/1-177 GAPNLSRVEE LDEPMFSD-- ---------- ---------- -------IAL ENSBTAP00000043925/1-175 GAPNLSRVEE LDEPMLSD-- ---------- ---------- -------VAL bmy_17712T0/1-131 GAPNLSRVEE LDEPMLSDVS ILRKVFCEKQ IFFFFLTLGE PSVSQAKVAL ENSTTRP00000015535/1-176 GAPNLSRVEE LDEPMLSD-- ---------- ---------- -------VAL BACU007201/1-176 GAPNLSRVEE LDEPMLSD-- ---------- ---------- -------VAL 201 250 ENSP00000361278/1-177 NIDQDL ENSBTAP00000043925/1-175 NIDQDL bmy_17712T0/1-131 NIDQDL ENSTTRP00000015535/1-176 NIDQDL BACU007201/1-176 NIDQDL