KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:29 2014 Check: 00 .. Name: ENSTTRP00000002638/1-504 Len: 624 Check: 1309 Weight: 1.00 Name: BACU008043/1-530 Len: 624 Check: 4747 Weight: 1.00 Name: bmy_19453T0/1-344 Len: 624 Check: 6610 Weight: 1.00 Name: ENSP00000442656/1-546 Len: 624 Check: 405 Weight: 1.00 Name: ENSBTAP00000043941/1-505 Len: 624 Check: 1847 Weight: 1.00 // 1 50 ENSTTRP00000002638/1-504 MAESAGASSF FLLVVLLLAG SGGSGPRGIQ ALLCACTSCL QANYTCETDG BACU008043/1-530 ---------- ---------- ---------- ---------- ---------- bmy_19453T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000442656/1-546 MAESAGASSF FPLVVLLLAG SGGSGPRGVQ ALLCACTSCL QANYTCETDG ENSBTAP00000043941/1-505 MAESAGASSF FPLVVLLLAG SGGSGPRGIQ ALLCACTSCL QANYTCETDG 51 100 ENSTTRP00000002638/1-504 ACMVSIFNLD GMEHHVRTCI PKVELVPAGK PFYCLSSEDL RNTHCCYTDF BACU008043/1-530 --MVSIFNLD GMEHHVRTCI PKVELVPAGK PFYCLSSEDL RNTHCCYTDF bmy_19453T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSP00000442656/1-546 ACMVSIFNLD GMEHHVRTCI PKVELVPAGK PFYCLSSEDL RNTHCCYTDY ENSBTAP00000043941/1-505 ACMVSIFNLD GMEHHVRTCI PKVELVPAGK PFYCLSSEDL RNTHCCYTDF 101 150 ENSTTRP00000002638/1-504 CNKIDLRVPS XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008043/1-530 CNKIDLRVPS GHLKEPEHPS MWGPVELVGI IAGPVFLLFL IIIIVFLVIN bmy_19453T0/1-344 ---------- ---------- MWGPVELVGI IAGPVFLLFL IIIIVFLVIN ENSP00000442656/1-546 CNRIDLRVPS GHLKEPEHPS MWGPVELVGI IAGPVFLLFL IIIIVFLVIN ENSBTAP00000043941/1-505 CNKIDLRVPS GHLKEPEHPS MWGPVELVGI IAGPVFLLFL IIIIVFLVIN 151 200 ENSTTRP00000002638/1-504 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXLPLFVQ BACU008043/1-530 YHQRVYHNRQ RLDMEDPSCE MCLSKDKTLQ DLVYDLSTSG SGSGLPLFVQ bmy_19453T0/1-344 YHQRVYHNRQ RLDMEDPSCE MCLSKDKTLQ DLVYDLSTSG SGSGLPLFVQ ENSP00000442656/1-546 YHQRVYHNRQ RLDMEDPSCE MCLSKDKTLQ DLVYDLSTSG SGSGLPLFVQ ENSBTAP00000043941/1-505 YHQRVYHNRQ RLDMEDPSCE MCLSKDKTLQ DLVYDLSTSG SGSGLPLFVQ 201 250 ENSTTRP00000002638/1-504 RTVARTIVLQ EIIGKGRFGE VWRGRWRGGD VAVKIFSSRE ERSWFREAEI BACU008043/1-530 RTVARTIVLQ EIIGKGRFGE VWRGRWRGGD VAGKIFSSRE ERSWFREAEI bmy_19453T0/1-344 RTVARTIVLQ EIIGKGRFGE VWRGRWRGGD VAVKIFSSRE ERSWFREAEI ENSP00000442656/1-546 RTVARTIVLQ EIIGKGRFGE VWRGRWRGGD VAVKIFSSRE ERSWFREAEI ENSBTAP00000043941/1-505 RTVARTIVLQ EIIGKGRFGE VWRGRWRGGD VAVKIFSSRE ERSWFREAEI 251 300 ENSTTRP00000002638/1-504 YQTVMLRHEN ILGFIAADNK ---------- ---------- ---------- BACU008043/1-530 YQTVMLRHEN ILGFIAADNK ---------- ---------- ---------- bmy_19453T0/1-344 YQTVMLRHEN ILGFIAADNK ---------- ---------- ---------- ENSP00000442656/1-546 YQTVMLRHEN ILGFIAADNK ADCSFLTLPW EVVMVSAAPK LRSLRLQYKG ENSBTAP00000043941/1-505 YQTVMLRHEN ILGFIAADNK ---------- ---------- ---------- 301 350 ENSTTRP00000002638/1-504 ---------- -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008043/1-530 ---------- -DNGTWTQLW LVSDYHEHGS LFDYLNRYTV TIEGMIKLAL bmy_19453T0/1-344 ---------- -DNGTWTQLW LVSDYHEHGS LFDYLNRYTV TIEGMIKLAL ENSP00000442656/1-546 GRGRARFLFP LNNGTWTQLW LVSDYHEHGS LFDYLNRYTV TIEGMIKLAL ENSBTAP00000043941/1-505 ---------- -DNGTWTQLW LVSDYHEHGS LFDYLNRYTV TIEGMIKLAL 351 400 ENSTTRP00000002638/1-504 XXXXXXXXXX XXXXXXXXKP GIAHRDLKSK NILVKKNGMC AIADLGLAVR BACU008043/1-530 SAASGLAHLH MEIVGTQGKP GIAHRDLKSK NILVKKNGMC AIADLGLAVR bmy_19453T0/1-344 SAASGLAHLH MEIVGTQGKP GIAHRDLKSK NILVKKNGMC AIADLGLAVR ENSP00000442656/1-546 SAASGLAHLH MEIVGTQGKP GIAHRDLKSK NILVKKNGMC AIADLGLAVR ENSBTAP00000043941/1-505 SAASGLAHLH MEIVGTQGKP GIAHRDLKSK NILVKKNGMC AIADLGLAVR 401 450 ENSTTRP00000002638/1-504 HDAVTDTIDI APNQRVGTKR YMAPEVLDET INMKHFDSFK CADIYALGLV BACU008043/1-530 HDAVTDTIDI APNQRVGTKR YMAPEVLDET INMKHFDSFK CADIYALGLV bmy_19453T0/1-344 HDAVTDTIDI APNQRVGTKR YMAPEVLDET INMKHFDSFK CADIYALGLV ENSP00000442656/1-546 HDAVTDTIDI APNQRVGTKR YMAPEVLDET INMKHFDSFK CADIYALGLV ENSBTAP00000043941/1-505 HDAVTDTIDI APNQRVGTKR YMAPEVLDET INMKHFDSFK CADIYALGLV 451 500 ENSTTRP00000002638/1-504 YWEIARRCNS GG-------- ----VHEEYQ LPYYDVVPSD -SIEEMRKVV BACU008043/1-530 YWEIARRCNS GGAAGDGEDD AGVLVRQRRS PPDRAAHQED PLPAQRAGGR bmy_19453T0/1-344 YWEIARRCNS GG-------- ---------- ---------- ---------- ENSP00000442656/1-546 YWEIARRCNS GG-------- ----VHEEYQ LPYYDLVPSD PSIEEMRKVV ENSBTAP00000043941/1-505 YWEIARRCNS GG-------- ----VHEEYQ LPYYDLVPSD PSIEEMRKVV 501 550 ENSTTRP00000002638/1-504 CDQKLRPN-I PNWWQSYEAL RVMG-K---M MRECWY---- --------AN BACU008043/1-530 EDLAAPPHTL PG-SGTYSRA AVLSVRWRPT SRFCPALCGQ EPGPQEGQSP bmy_19453T0/1-344 ------TF-L PAFSGSYLAV QSAG-PPEGL VFSCLL---- --------SP ENSP00000442656/1-546 CDQKLRPN-I PNWWQSYEAL RVMG-K---M MRECWY---- --------AN ENSBTAP00000043941/1-505 CDQKLRPN-I PNWWQSYEAL RVMG-K---M MRECWY---- --------AN 551 600 ENSTTRP00000002638/1-504 GAARLTALRI KK-------- ----TLSQLS VQEDVKI--- ---------- BACU008043/1-530 GDSLTPTLGL RHRHLLYLPP SGTEPLRANG VENSVPQPGP AVAGSSAKPG bmy_19453T0/1-344 NSLSMPSART RH-------- ----T----- ---------- ---------- ENSP00000442656/1-546 GAARLTALRI KK-------- ----TLSQLS VQEDVKI--- ---------- ENSBTAP00000043941/1-505 GAARLTALRI KK-------- ----TLSQLS VQEDVKI--- ---------- 601 650 ENSTTRP00000002638/1-504 ---------- ---------- ---- BACU008043/1-530 APGEKPGLVT GGLGGPGRSE RGPC bmy_19453T0/1-344 ---------- ---------- ---- ENSP00000442656/1-546 ---------- ---------- ---- ENSBTAP00000043941/1-505 ---------- ---------- ----