KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:33 2014 Check: 00 .. Name: ENSP00000234195/1-573 Len: 625 Check: 4986 Weight: 1.00 Name: ENSBTAP00000043981/1-497 Len: 625 Check: 8747 Weight: 1.00 Name: bmy_20046T0/1-379 Len: 625 Check: 5147 Weight: 1.00 Name: ENSTTRP00000006676/1-571 Len: 625 Check: 518 Weight: 1.00 // 1 50 ENSP00000234195/1-573 ---------- ------MGKC ---------- ---LSCCKED QSFQRCSPED ENSBTAP00000043981/1-497 ---------- ------MGKC ---------- ---LSCYKEE QNCQPKCPAD bmy_20046T0/1-379 MNSDQKKPPP QIHFEXRGKI KKKGRDGFHD HIDLSCCKED QSFEPKCAAD ENSTTRP00000006676/1-571 ---------- ------MGQC ---------- ---LSCCKED QSFQPKCPAD 51 100 ENSP00000234195/1-573 QVSTDAQHRG ASSISQPSIS LGHKTSYSPV THKVNAAKAS RRLLSVSS-- ENSBTAP00000043981/1-497 QLPSDLLHRG ASSVIQPTKF LDFKAARPTP MLKGSSHKGS KISSPSSNVS bmy_20046T0/1-379 QVSSKPLHPG ASSIMQPPAS LDFKAAYPPF MRRGSSPRGS KISSSSANTS ENSTTRP00000006676/1-571 QVSSDPLHPG ASSIIQPPES LDFKTAHPPF MHRGSSPRGS KIASSSSNTS 101 150 ENSP00000234195/1-573 --PSFSERRY SLFVGFQKRN ASPYWQQSRA NFDSEEDT-- GFTDIKSSSD ENSBTAP00000043981/1-497 FYATFLERRH SLFPKFQKSS TSLHTVQSRA NFDSEEKR-- SFIDLKSASE bmy_20046T0/1-379 SYSSFFGRRH SLFAKFQKSS ASLHSGQSRA NFDSEEKR-- SFGDLKSPLE ENSTTRP00000006676/1-571 SYSSFFGRRH SLFAKFQKSS ASLHSGQSRA NFDSEEKKRS SFGDLKSPSE 151 200 ENSP00000234195/1-573 HCGSFISRRR R-FSSRKLSI VSYYKSA-IF FDPQASGQNV FNLNEIEIFS ENSBTAP00000043981/1-497 H---FRFRSR SVFSAPKLSI ISCYENAGTF ---DASSSCI FNPNEVEVIS bmy_20046T0/1-379 H---FRFRSR SLFSAPKLNI ISCYESASTF FDPQSGSQCI FNPNEIEIIS ENSTTRP00000006676/1-571 H---FRFRSR SLFSAPKLNI ISCYESASNF FDPQSRSQCI FNPNEIEIIS 201 250 ENSP00000234195/1-573 KTSSNTDAKK HITISAPEYN TKNFKNFETN TTSPAFGNTI DTASYQQSTS ENSBTAP00000043981/1-497 KNSNITGAEK YIHSYSAEYD TTYFMKSKSK ANSSACRDTV --ATLYQSTA bmy_20046T0/1-379 KNLSITDAGK YISSCSPEYN TKYFMNSETK ANSSACRNTV --ASIYQSTA ENSTTRP00000006676/1-571 KNLSITDAGK YISSYSPEYN TKYFMNSETN ANSSACRNTV -----HQSTA 251 300 ENSP00000234195/1-573 SFFSLASDIS SPDQQNGIAN DIQQRGQLCK DLKDFLHPRP ESYSTGHSPI ENSBTAP00000043981/1-497 TMLTLPSIIS YSSEQHGIDN DIQERDQ--- ---------- ---------- bmy_20046T0/1-379 TMLTLSTITS YSSQQHGVAS DIQERDQLR- --SNSFHPAF QSRSRNNSPA ENSTTRP00000006676/1-571 TMLTLPTITS YSSQQHGVAS DIQEREPLR- --NNSFHPVF QSRSRNNSPA 301 350 ENSP00000234195/1-573 MIPQHPSQSG TFPFLHKAGF SSSYKNSGCF IPPQSELTSG LFEDEDFAVL ENSBTAP00000043981/1-497 ---------- ---------- ---------- ---------- ---------- bmy_20046T0/1-379 MVQHHPSQSV TFPVLHNVGF TSFYKNARSF TPSQNGVTSD PFEDENNAIS ENSTTRP00000006676/1-571 MLQHHASQSV TFPVLHNVGF TSFYKNARSF TPPQNGVTSD PFEDENNAIS 351 400 ENSP00000234195/1-573 FQDEDRSSPI EIPKIRYITA NTDTEEQSFP VPKAFNTRVE ELNLDVLLQK ENSBTAP00000043981/1-497 ---------- ------YVTA NTDTEEQSFP VPKEFNTHVE ELNLDALIQR bmy_20046T0/1-379 SEDEDKSSPN EIPKIR---- ----SPQTLP S--------- -------LRR ENSTTRP00000006676/1-571 SKDEDKSSPN EIPKIRYITA NTDTEEQSFP LPKAFNTHVE ELNLDALIQR 401 450 ENSP00000234195/1-573 VDHLRMSESG KSESFELLRD HKEKFRDEIE FMWRFARAYG DMYELSTNTQ ENSBTAP00000043981/1-497 ADNLRVNESR KVESFELLCD HKEKFRDEIE FIWRFARAYG DMYELSTNIQ bmy_20046T0/1-379 AAQIR----- ---------- ---SFR---- ---------- ---------- ENSTTRP00000006676/1-571 ADNLRMNESR KMESFELLCD HKEKFRDEIE FIWRFARAYG DMYELSTNAQ 451 500 ENSP00000234195/1-573 EKKHYANIGK TLSERAINRA PMNGHCHLWY AVLCGYVSEF EGLQNKINYG ENSBTAP00000043981/1-497 EKKHYANIGK TLGEKAIMRA PKNGYCHLWY AVLCGYVSEF EGLQNKINYG bmy_20046T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006676/1-571 EKKHYANIGK TLGEKAITRA PMNGHCHLWY AVLCGYVSEF EGLQNKINYG 501 550 ENSP00000234195/1-573 HLFKEHLDIA IKLLPEEPFL YYLKGRYCYT VSKLSWIEKK MAATLFGKIP ENSBTAP00000043981/1-497 YRFKEHLDKA IEFLPEEPFL YYLKGRYCYA VSKLSWIERK MAATLFGNIP bmy_20046T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006676/1-571 YRFKEHLDKA IEFLPEEPFL YYLKGRYCYT VSKLSWIEKK MAATLFGKIP 551 600 ENSP00000234195/1-573 SSTVQEALHN FLKAEELCPG YSNPNYMYLA KCYTDLEENQ NALKFCNLAL ENSBTAP00000043981/1-497 SSTVQEALQN FLKVEELQPG FSKSNYMFMA KCYADLNQID SAMKFCNLAV bmy_20046T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006676/1-571 SATVQEALQN FLKVEELHPG FSKSNYMFLA KCYIDLEQTD AAVKFCNMAV 601 650 ENSP00000234195/1-573 LLPTVTKEEL ---------- ----- ENSBTAP00000043981/1-497 LLPCITKEDK DAQKEVKKIS TSLKR bmy_20046T0/1-379 -----TRHTI ---------- ----- ENSTTRP00000006676/1-571 LLPCVTKEEL N--------- -----