KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:34 2014 Check: 00 .. Name: bmy_07097T0/1-330 Len: 547 Check: 4275 Weight: 1.00 Name: ENSBTAP00000043987/1-430 Len: 547 Check: 997 Weight: 1.00 Name: ENSP00000262158/1-426 Len: 547 Check: 2789 Weight: 1.00 Name: BACU017655/1-542 Len: 547 Check: 8528 Weight: 1.00 Name: ENSTTRP00000004100/1-426 Len: 547 Check: 2865 Weight: 1.00 // 1 50 bmy_07097T0/1-330 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043987/1-430 ---------- ---------- ---------- ---------- ---------- ENSP00000262158/1-426 ---------- ---------- ---------- ---------- ---------- BACU017655/1-542 MPASPHPQIK LLSKGERGFF LPPAAQPNAF RFLPSRIFHV GSRGWRARHS ENSTTRP00000004100/1-426 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_07097T0/1-330 -----MPRSA PRAAAAPARA PAAAAVACAC CP-------- ------NSAP ENSBTAP00000043987/1-430 ---------- ---------- ---------- ---------- ---------- ENSP00000262158/1-426 ---------- ---------- ---------- ---------- ---------- BACU017655/1-542 GAAAGGPLFG EAPTGPSGRR RSCQGPCCCC CRLRLLPQLG TRLLHGVRRS ENSTTRP00000004100/1-426 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_07097T0/1-330 DFFMVRQTTF LLASSPRMFR TKRSALVRRL WRSRAPGGED EEEGAGGGGG ENSBTAP00000043987/1-430 ---------- -------MFR TKRSALVRRL WRSRAPGGED EEEGAGGGGG ENSP00000262158/1-426 ---------- -------MFR TKRSALVRRL WRSRAPGGED EEEGAGGGGG BACU017655/1-542 CSLLSRQTTF LLASSPRMFR TKRSALVRRL WRSRAPGGED EEEGAGGGGG ENSTTRP00000004100/1-426 ---------- -------MFR TKRSALVRRL WRSRAPGGED EEEGAGGGGG 151 200 bmy_07097T0/1-330 GGELRGEGAT DGRAHGAGGG GAGRAGCCLG KAVRGAKGHH HPHPPAAGSG ENSBTAP00000043987/1-430 GGELRGEGAT DGRAHGAGGG GAGRAVCCLG KAVRGAKGHN HPHPPAAGAG ENSP00000262158/1-426 GGELRGEGAT DSRAHGAGGG GPGRAGCCLG KAVRGAKGHH HPHPPAAGAG BACU017655/1-542 GGELRGEGAT DGRAHGAGGG GAGRAGCCLG KAVRGAKGHH HPHPPATGSG ENSTTRP00000004100/1-426 GGDLRGEGAT DGRAHGAGGG GAGRAGCCLG KAVRGAKGHH HSHPPAAGSG 201 250 bmy_07097T0/1-330 AAGGAEADLK ALTHSVLKKL KERQLELLLQ AVESRGGTRT ACLLLPGRLD ENSBTAP00000043987/1-430 AAGGGEADLK ALTHSVLKKL KERQLELLLQ AVESRGGTRT ACLLLPGRLD ENSP00000262158/1-426 AAGGAEADLK ALTHSVLKKL KERQLELLLQ AVESRGGTRT ACLLLPGRLD BACU017655/1-542 AAGGAEADLK ALTHSVLKKL KERQLELLLQ AVESRGGTRT ACLLLPGPQD ENSTTRP00000004100/1-426 AAGGAEADLK ALTHSVLKKL KERQLELLLQ AVESRGGTRT ACLLLPGRLD 251 300 bmy_07097T0/1-330 CRLGLGAPSG SQPAQPPSSY SLPLLLCKVF RWPDLRHSSE VKRLCCCESY ENSBTAP00000043987/1-430 CRLGLGAPAG SQPAQPPSTY SLPLLLCKVF RWPDLRHSSE VKRLCCCESY ENSP00000262158/1-426 CRLGPGAPAG AQPAQPPSSY SLPLLLCKVF RWPDLRHSSE VKRLCCCESY BACU017655/1-542 CRLGLGAPSG SQPAQPPSSY SLPLLLCKVF RWPDLRHSSE VKRLCCCESY ENSTTRP00000004100/1-426 CRLGLGAPSG SQPAQPPSSY SLPLLLCKVF RWPDLRHSSE VKRLCCCESY 301 350 bmy_07097T0/1-330 GKINPELVCC NPHHLSRLCE LE-SPPPPYS RYPMDF---L KPTADCPDAV ENSBTAP00000043987/1-430 GKINPELVCC NPHHLSRLCE LAPSPPPSFL RIPSDFSLLL KSTADCPDAV ENSP00000262158/1-426 GKINPELVCC NPHHLSRLCE LE-SPPPPYS RYPMDF---L KPTADCPDAV BACU017655/1-542 GKINPELVCC NPHHLSRLCE LE-SPPPPYS RYPMDF---L KPT-DCPDAV ENSTTRP00000004100/1-426 GKINPELVCC NPHHLSRLCE LE-SPPPPYS RYPMDF---L KPTADCPDAV 351 400 bmy_07097T0/1-330 PSSAETGGTN YLAPGGLSGE LLSLT----- ---------- ------FLAI ENSBTAP00000043987/1-430 PSSAETGGTN YLAPGGLSDS QLLLEPGDRS HWCVVAYWEE KTRVGRLYCV ENSP00000262158/1-426 PSSAETGGTN YLAPGGLSDS QLLLEPGDRS HWCVVAYWEE KTRVGRLYCV BACU017655/1-542 PSSAETGGTN YLAPGGLSDS QLLLEPGDRS HWCVVAYWEE KTRVGRLYCV ENSTTRP00000004100/1-426 PSSAETGGTN YLAPGGLSDS QLLLEPGDRS HWCVVAYWEE KTRVGRLYCV 401 450 bmy_07097T0/1-330 RRPP-EMTGD WRNGGGLLPP QL-------- ---------- ---------- ENSBTAP00000043987/1-430 QEPSLDIFYD LPQGNGFCLG QLNSDNKSQL VQKVRSKIGC GIQLTREVDG ENSP00000262158/1-426 QEPSLDIFYD LPQGNGFCLG QLNSDNKSQL VQKVRSKIGC GIQLTREVDG BACU017655/1-542 QEPSLDIFYD LPQGNGFCLG QLNSDNKSQL VQKVRSKIGC GIQLTREVDG ENSTTRP00000004100/1-426 QEPSLDIFYD LPQGNGFCLG QLNSDNKSQL VQKVRSKIGC GIQLTREVDG 451 500 bmy_07097T0/1-330 VWN------- ---------- ---------- ---------- ---------- ENSBTAP00000043987/1-430 VWVYNRSSYP IFIKSATLDN PDSRTLLVHK VFPGFSIKAF DYEKAYSLQR ENSP00000262158/1-426 VWVYNRSSYP IFIKSATLDN PDSRTLLVHK VFPGFSIKAF DYEKAYSLQR BACU017655/1-542 VWVYNRSSYP IFIKSATLDN PDSRTLLVHK VFPGFSIKAF DYEKAYSLQR ENSTTRP00000004100/1-426 VWVYNRSSYP IFIKSATLDN PDSRTLLVHK VFPGFSIKAF DYEKAYSLQR 501 550 bmy_07097T0/1-330 ---------- ---------- ---------- ---------- ------- ENSBTAP00000043987/1-430 PNDHEFMQQP WTGFTVQISF VKGWGQCYTR QFISSCPCWL EVIFNSR ENSP00000262158/1-426 PNDHEFMQQP WTGFTVQISF VKGWGQCYTR QFISSCPCWL EVIFNSR BACU017655/1-542 PNDHEFMQQP WTGFTVQISF VKGWGQCYTR QFISSCPCWL EVIFNSR ENSTTRP00000004100/1-426 PNDHEFMQQP WTGFTVQISF VKGWGQCYTR QFISSCPCWL EVIFNSR