KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:34 2014 Check: 00 .. Name: ENSP00000342981/1-528 Len: 575 Check: 688 Weight: 1.00 Name: ENSBTAP00000043989/1-525 Len: 575 Check: 5194 Weight: 1.00 Name: ENSTTRP00000009545/1-561 Len: 575 Check: 1314 Weight: 1.00 Name: bmy_12166T0/1-492 Len: 575 Check: 5564 Weight: 1.00 Name: BACU001831/1-526 Len: 575 Check: 8644 Weight: 1.00 // 1 50 ENSP00000342981/1-528 MDHCGALFLC LCLLTLQNAT TETWEELLSY MENMQV-SRG RSSVFSSRQL ENSBTAP00000043989/1-525 MNCCWAPFLY LCLLVSQSRT AEASQETLHW MEKMEVAAKS RISTSSAELI ENSTTRP00000009545/1-561 MDRCGALFLC LCLLMSQSRT EEASQEILRW MKRMETAARS RSLTSFAELI bmy_12166T0/1-492 MDRCGALFLC LCLLMSQSRT EEASQEILRW MERMEMAARS RSLISFAELI BACU001831/1-526 MDRCGALVLC LCLLMSQSRT EEASQEILRW MERMEVAARS RSLTSFAELI 51 100 ENSP00000342981/1-528 HQLEQMLLNT SFPGYNLTLQ TPTIQSLAFK LSCDFSGLSL TSATLKRVPQ ENSBTAP00000043989/1-525 HGLELRLLNA SFGGHNLTLQ TQIIQALAFK LNCNFSGLSL SSAALEKVPQ ENSTTRP00000009545/1-561 HGLESRLLNA SFGGHNLTLR THTIQTLAFK LGCNFTGLSL GSAALQQVPQ bmy_12166T0/1-492 HGLESRLLNA SFGGHNLTLR THTIQTLAFK LGCNFTGLSL RSGALEQVPQ BACU001831/1-526 HGLESRLLNA SFGGHNLTLR THTIQTLAFK LGCNFTGLSV RSAALEQVPQ 101 150 ENSP00000342981/1-528 AGGQHARGQH AMQFPAELTR DACKTRPREL RLICIYFSNT HFFKDENNSS ENSBTAP00000043989/1-525 -----ARPQH AMQFPAELTR NACRTRSRDL RLICIYFSST RFFQKDINSS ENSTTRP00000009545/1-561 -----AQVPL AMQFPAELTH DACRVRPREL TLICIYFSNA RFFQKDINSS bmy_12166T0/1-492 -----AQVPL AMQFPAELTR DACRVRSREL SLICIYFSNT RFFQKDINSS BACU001831/1-526 -----AQVPL AMQFPAELTW DACRVRSREL SLICIYFSNT RFFQKDINSS 151 200 ENSP00000342981/1-528 LLNNYVLGAQ LSHGHVNNLR DPVNISFWHN QSLE-GYTLT CVFW-KEGAR ENSBTAP00000043989/1-525 LLNNYVLGAQ LSHGYVSNLS EPVNISFWHN QSLGLGWTHM TCHWERGGSS ENSTTRP00000009545/1-561 VLNNYVLGAQ LSHGQVSNLR EPVNISFWHN QSLE-GYTVT CVFW-KEGAS bmy_12166T0/1-492 VLNNYVLGAQ LSHGQVSNLS EPVNISFWHN QSLE-GYTVT CVFW-KEGAS BACU001831/1-526 VLNNYVLGAQ LSHGQVSNLS EPVNISFWHN QSLE-GYTVT CVFW-KEGAS 201 250 ENSP00000342981/1-528 KQPWGGWSPE GCRTEQPSHS QVLCRCNHLT YFAVLMQLSP ALVPAELLAP ENSBTAP00000043989/1-525 RHHWGAWSPE GCHTEQPTPS QVLCRCNHLT YFAVLMQLSQ APVPAELLAP ENSTTRP00000009545/1-561 KHHWGAWSTE GCRTEQPSPS QVLCRCNHLT YFAVLMQLSQ APVPAELLAP bmy_12166T0/1-492 KHHWGAWSTE GCRTEQPSPS QVLCRCNHLT YFAVLMQLSP APVPAELLAP BACU001831/1-526 KHHWGAWSTE GCRTEQPSPS QVLCRCNHLT YFAVLMQLSP APVPAELLAP 251 300 ENSP00000342981/1-528 LTYISLVGCS ISIVASLITV LLHFHFRKQS DSLTRIHMNL HASVLLLNIA ENSBTAP00000043989/1-525 LTYISLVGCS ISIVASLLTV LLHLQARKQS DSVTRIHMNL HASVLLLNIT ENSTTRP00000009545/1-561 LTYISLVGCS ISIVASQLTD MLPY-CRKPS DSITWIHVNL HASVLLLNVA bmy_12166T0/1-492 LTYISLVGCS ISIVASLLTV LLHLHARKQN DSITCIHMNL HASVLLLNVA BACU001831/1-526 LTYISLVGCS ISIVASLLTV LLHLHDRKQS DSITCIHMNL HASVLLLNVA 301 350 ENSP00000342981/1-528 F------LLS PAFAMSPVPG SACTALAAAL HYALLSCLTW MAIEGFNLYL ENSBTAP00000043989/1-525 F------LLS PVLATPPAPG AACVVLAATL HYALLSCLTW MAIEGFNLYL ENSTTRP00000009545/1-561 F------LLS PVPAVPPVPE SACVALAATL HYALLSCFTW MAIEGFNLYL bmy_12166T0/1-492 F------LLS PVLAMPPVPG SACVALAATL HYALLSCLAW MAIEGFNLYL BACU001831/1-526 FLLXXXXLLS PVLAMPPVPG SACVALAATL HYALLSCLAW MAIEGFNLYL 351 400 ENSP00000342981/1-528 LLGRVYNIYI RRYVFKLGVL GWGAPALLVL LSLSVKSSVY GPCTIPVFDS ENSBTAP00000043989/1-525 LLGRVYNVYI RRYVLKLCAV GWGVPAFLVL FLLAVKSSVY GPYKIQLSDS ENSTTRP00000009545/1-561 LLGRVYNIYI RRYVLKLCAL GWGVPAFLVL LLLAVKSSVY GPYRIPLSDS bmy_12166T0/1-492 LLGRVYNIYI RRYVLKLCTV GWGVPAFLVL LLLAVKSSVY GPHRIPLSDS BACU001831/1-526 LLGRVYNIYI RRYVLKLCTV GWGVPAFLVL LLLAVKSSVY GPHRIPLSDS 401 450 ENSP00000342981/1-528 WENGTGFQNM SICWVRSPVV HSVLVMGYGG LTSLFNLVVL AWALWTLRRL ENSBTAP00000043989/1-525 HGNSTGFKIT SICWVQSSWV HSVLVMGYGG LTSLFNLVVL AWALRVLNKL ENSTTRP00000009545/1-561 QGNSTGSQNT SICWVRDAWV HGILVMGSGG LTSLFNLVVL AWALRVLHRL bmy_12166T0/1-492 QGNSTGFQST SICWVRNPWV HGVLVMGSGG LTSLFNLVVL AWALRVLHRL BACU001831/1-526 QGNSTGFQST YICWVRNPWV HGVLVMGSGG LTSLFNLVVL AWALRVLHRL 451 500 ENSP00000342981/1-528 RERADAPSVR ACHDTVTVLG LTVLLGTTWA LAFFSFGVFL LPQLFLFTIL ENSBTAP00000043989/1-525 RAQEKAPGTR ACRDTVTVLG LTVLLGTTWA LAFFSFSVFL LPQLFLFTIF ENSTTRP00000009545/1-561 RAQEKALGPR ACWDTVTVLG LTVLLGTTWI LAFFSFGVFL LPQLFLFTTF bmy_12166T0/1-492 RAREKALGPR ACWDTVTVLG LTVLLGTTWT LAFFSFG--- ---------- BACU001831/1-526 RAREKALGPR ACWDTVTVLG LTVLLGTTWI LAFFSFGVFL LPQLFLFSTF 501 550 ENSP00000342981/1-528 NSLYG----- -----FFLFL WFCSQRC--- ---------- ---------- ENSBTAP00000043989/1-525 NSLYG----- -----FFLFL WFCSQRC--- ---------- ---------- ENSTTRP00000009545/1-561 NSLYGKGELV SEKSDAILLL KNNESKCLLH LFSGFSFSEP IFSLIMVRGN bmy_12166T0/1-492 ---------- ---------- -----RR--- ---------- ---------- BACU001831/1-526 NSLYG----- -----FFLFL WFCSQRR--- ---------- ---------- 551 600 ENSP00000342981/1-528 -----RSEAE AKAQIEAFSS SQTTQ ENSBTAP00000043989/1-525 -----RSEAE AEAEMEVFT- SQMVQ ENSTTRP00000009545/1-561 PYPMGSEDSH IPANCEVGHF QQECI bmy_12166T0/1-492 -----RSEAE ----MEAFSS SQMVQ BACU001831/1-526 -----RSEAE ----MEAFSS SQMMQ