KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:36 2014 Check: 00 .. Name: ENSP00000234198/1-328 Len: 335 Check: 9001 Weight: 1.00 Name: ENSBTAP00000044029/1-331 Len: 335 Check: 6931 Weight: 1.00 Name: bmy_09105T0/1-330 Len: 335 Check: 4545 Weight: 1.00 Name: ENSTTRP00000010784/1-281 Len: 335 Check: 8181 Weight: 1.00 // 1 50 ENSP00000234198/1-328 MTGVFDSLVA DMHSTQIAAS STYHQHQQPP SGGGAGPGGN SSSSSSLHKP ENSBTAP00000044029/1-331 MTGVFDSLVA DMHSTQITAS STYHQHQQPP SGGGAGPGG- -SNGSSLHKP bmy_09105T0/1-330 MTGVFDSLVA DMHSTQITAS STYHQQQQPP SGGGAGPGG- -SNGSSLHKP ENSTTRP00000010784/1-281 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000234198/1-328 QESPTLPVST ATDSSYYTNQ QHPAG-GGGG GG---SPYAH MGSYQYQASG ENSBTAP00000044029/1-331 QESPTLPVST ATDSSYYTNQ QHPAG-GGGG GG-GGSPYAH MGSYQYHASG bmy_09105T0/1-330 QESPTLPVST ATDSSYYTNQ QHPAG-GGGG GGAGGSPYAH MGSYQYHASG ENSTTRP00000010784/1-281 ---PTLPVST ATDSSYYTNQ QHPAGSGGGG GGAGGSPYAH MGSYQYHASG 101 150 ENSP00000234198/1-328 LNNVPYSAKS SYDLGYTAAY TSYAPYGTSS SPANNEPEKE DLEPEIRIVN ENSBTAP00000044029/1-331 LNNVPFSAKS GYDLGYTAAY TSYAPYGTSS SPANNEPEKE DLEPEIRIVN bmy_09105T0/1-330 LNNVPYSAKS GYDLGYTAAY T-YAPYGTSS SPANNEPEKE DLEPEIRIVN ENSTTRP00000010784/1-281 LNNVPYSAKS GYDLGYTAAY TSYAPYGTSS SPANNEPEKE DLEPEIRIVN 151 200 ENSP00000234198/1-328 GKPKKVRKPR TIYSSFQLAA LQRRFQKTQY LALPERAELA ASLGLTQTQV ENSBTAP00000044029/1-331 GKPKKVRKPR TIYSSFQLAA LQRRFQKTQY LALPERAELA ASLGLTQTQV bmy_09105T0/1-330 GKPKKVRKPR TIYSSFQLAA LQRRFQKTQY LALPERAELA ASLGLTQTQV ENSTTRP00000010784/1-281 GKPKKVRKPR TIYSSFQLAA LQRRFQKTQY LALPERAELA ASLGLTQTQV 201 250 ENSP00000234198/1-328 KIWFQNRRSK FKKMWKSGEI PSEQHPGASA SPPCASPPVS APASWDFGVP ENSBTAP00000044029/1-331 KIWFQNRRSK FKKMWKSGEI PSEQHPGTSA SPPCASPPAS APASWDFGAP bmy_09105T0/1-330 KIWFQNRRSK FKKMWKSGEI PSEQHPGASA SPPCASPPAS APTSWDFGAP ENSTTRP00000010784/1-281 KIWFQNRRSK FKKMWKSGEI PSEQHPGTSA SPPCASPPAS APTSWDFGAP 251 300 ENSP00000234198/1-328 QRMAGGG-GP GSGGSGAGSS GSSPSSAASA FLGNYPWYHQ TSGSASHLQA ENSBTAP00000044029/1-331 QRMGGGGGGP GSGGSGAGSS GSSPSSAASA FLGNYPWYHQ ASGSASHLQA bmy_09105T0/1-330 QRMGGGG-GP GSGGSGAGSS GSSPSSAASA FLGNYPWYHQ ASGSASHLQA ENSTTRP00000010784/1-281 QRMGGGG-GP GSGGSGAGSS GSSPSSAASA FLGNYPWYHQ ASGSASHLQA 301 350 ENSP00000234198/1-328 TAPLLHPTQT PQPHHHH--H HHGGGGAPVS AGTIF ENSBTAP00000044029/1-331 AAPLLHPTQT PQPHHHHHHH HGGGGGAPVS AGTIF bmy_09105T0/1-330 AAPLLHPAQT PQPHHHHHQH HHGGGGAPVS AGTIF ENSTTRP00000010784/1-281 AAPLLHPAQT PQPHHHHHQH HHGGGGAPVS AGTIF