KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:37 2014 Check: 00 .. Name: ENSTTRP00000015541/1-296 Len: 1439 Check: 8415 Weight: 1.00 Name: BACU017652/1-860 Len: 1439 Check: 8060 Weight: 1.00 Name: ENSBTAP00000044054/1-923 Len: 1439 Check: 2758 Weight: 1.00 Name: ENSP00000414750/1-1001 Len: 1439 Check: 3308 Weight: 1.00 Name: bmy_21121T0/1-570 Len: 1439 Check: 6441 Weight: 1.00 // 1 50 ENSTTRP00000015541/1-296 MASSPLPGPN DILLASPSSA FQPDALSQPR PGHANLKPNQ VGQVILYGIP BACU017652/1-860 MASSPLPGPN DILLASPSSA FQPDALNQPR PGHANLKPNQ VGQVILYGIP ENSBTAP00000044054/1-923 MASSPLPGPN DILLASPSSA FQPDALSQPR PGHANLKPNQ VGQVILYGIP ENSP00000414750/1-1001 MASSPLPGPN DILLASPSSA FQPDTLSQPR PGHANLKPNQ VGQVILYGIP bmy_21121T0/1-570 MASSPLPGPN DILLASPSSA FQPDALNQPR PGHANLKPNQ VGQVILYGIP 51 100 ENSTTRP00000015541/1-296 IVSLVIDGQE RLCLAQISNT LLKNFSYNEI HNRRVALGIT CVQCTPVQLE BACU017652/1-860 IVSLVIDGQE RLCLAQISNT LLKNFSYNEI HNRRVALGIT CVQCTPVQLE ENSBTAP00000044054/1-923 IVSLVIDGQE RLCLAQISNT LLKNFSYNEI HNRRVALGIT CVQCTPVQLE ENSP00000414750/1-1001 IVSLVIDGQE RLCLAQISNT LLKNFSYNEI HNRRVALGIT CVQCTPVQLE bmy_21121T0/1-570 IVSLVIDGQE RLCLAQISNT LLKNFSYNEI HNRRVALGIT CVQCTPVQLE 101 150 ENSTTRP00000015541/1-296 ILRRAGAMPI SSRRCGMITK REAERLCKSF LGENRPPKLP DNFAFDVSHE BACU017652/1-860 ILRRAGAMPI SSRRCGMITK REAERLCKSF LGENRPPKLP DNFAFDVSHE ENSBTAP00000044054/1-923 ILRRAGAMPI SSRRCGMITK REAERLCKSF LGENRPPKLP DNFAFDVSHE ENSP00000414750/1-1001 ILRRAGAMPI SSRRCGMITK REAERLCKSF LGENRPPKLP DNFAFDVSHE bmy_21121T0/1-570 ILRRAGAMPI SSRRCGMITK REAERLCKSF LGENRPPKLP DNFAFDVSHE 151 200 ENSTTRP00000015541/1-296 CAWGCRGSFI PARYNSSRAK CIKCSYCNMY FSRNKFIFHS HRTPDAQYTQ BACU017652/1-860 CAWGCRGSFI PARYNSSRAK CIKCSYCNMY FSPNKFIFHS HRTPDAKYTQ ENSBTAP00000044054/1-923 CAWGCRGSFI PARYNSSRAK CIKCSYCNMY FSPNKFIFHS HRTPDAKYTQ ENSP00000414750/1-1001 CAWGCRGSFI PARYNSSRAK CIKCSYCNMY FSPNKFIFHS HRTPDAKYTQ bmy_21121T0/1-570 CAWGCRGSFI PARYNSSRAK CIKCSYCNMY FSPNKFIFHS HRTPDAKYTQ 201 250 ENSTTRP00000015541/1-296 PDAANFNSWR RHLKLTDKSP -DELVFAWED VKVMINGGSR KRALPQPXXX BACU017652/1-860 PDAANFNSWR RHLKLTDKSP QDELVFAWED VKAMFNGGSR KRALPQPGAH ENSBTAP00000044054/1-923 PDAANFNSWR RHLKLTDKSP QDELVFAWED VKAMFNGGSR KRALPQPGTH ENSP00000414750/1-1001 PDAANFNSWR RHLKLTDKSP QDELVFAWED VKAMFNGGSR KRALPQPGAH bmy_21121T0/1-570 PDAANFNSWR RHLKLTDKSP QDELVFAWED VKAMFNGGSR KRALPQPGAH 251 300 ENSTTRP00000015541/1-296 XXXXXXXXIR TRSIA----- ---------- ---------- ---------- BACU017652/1-860 PACHPLSSVK AAAVAAAAAV AGGGGLLGPH LLXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 PACHPLSSVK AAAVAAAAAV AGGGGLLGPH LL-------- ---------- ENSP00000414750/1-1001 PACHPLSSVK AAAVAAAAAV AGGGGLLGPH LL-------- ---------- bmy_21121T0/1-570 PACHPLSS-- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- ---------- ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- ---------- bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ENSBTAP00000044054/1-923 ---------- ---------- ---------- ---------- --GAPPP-PP ENSP00000414750/1-1001 ---------- ---------- ---------- ---------- --GAPPPPPP bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 PPPPLAELAG APHAPHHKRP RFEDDDDSLQ EAAVVADTSL SAAAAASLSV ENSP00000414750/1-1001 PPPPLAELAG APHA-HHKRP RFDDDDDSLQ EAAVVAAASL S-AAAASLSV bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 AAASGGAGAA GGGAGGGCV- -------TGA GAAAGAKGPR SYPVIPVPSK ENSP00000414750/1-1001 AAASGGAGTG GGGAGGGCVA GVGVGAGAGA GAGAGAKGPR SYPVIPVPSK bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 GSFGGVLQKF PGCGGLFPHP YTFPAAAAAF GLCHKKEDAG AAADFTGGCG ENSP00000414750/1-1001 GSFGGVLQKF PGCGGLFPHP YTFPAAAAAF SLCHKKEDAG AAAEALGGAG bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 RRGRGAQASY -WSGLFWPAG RKDAFYPPSS LHQDVPAP-- -PTFSWLTSH ENSP00000414750/1-1001 AGGAGAAPKA GLSGLFWPAG RKDAFYPPFC MFWPPRTPGG LPVPTYLQPP bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 PLTSKPGFVS IGKPFPILPN LITTFD---- ---------- -----PLFNN ENSP00000414750/1-1001 PQPPSALGCA LGESPALLRQ AFLDLAEPGG AAGSAEAAPP PGQPPQVVAN bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 DFFHHPPPHL SGALHSLPEF DP-------- ---------- ---------- ENSP00000414750/1-1001 GPGSGPPPPA GGAGSRDALF ESPPGGSGGD CSAGSTPPAD SVAAAGAGAA bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 ---------- ITSPHARH-- ---------- ---------- -KADPKRFLN ENSP00000414750/1-1001 AAGSGPAGSR VPAPHHPHLL EGRKAGGGSY HHSSAFRPVG GKDDAESLAK bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 KLALSSLLPY IYKTHSLAHK NNSLIEEALN PQKLP-PLLL LPPQPDEPGS ENSP00000414750/1-1001 LHGASAGAPH SAQTHPHHHH HPHHHHHHHH PPQPPSPLLL LPPQPDEPGS bmy_21121T0/1-570 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSTTRP00000015541/1-296 ---------- ---------- ---------- -------FSS QT-------- BACU017652/1-860 ---------- ---------- --PHHRGLLS PSGTSCSYPS EDTSEEEDDE ENSBTAP00000044054/1-923 ERHHAA--PP PPPPPPPPLA PQPHPRGLLS PGGTSCSYPS EDSSEDEDDE ENSP00000414750/1-1001 ERHHPAPPPP PPPPPPPPLA QHPHHRGLLS PGGTSCCYPS EDSSEDEDDE bmy_21121T0/1-570 ---------- ---------- --PHHRGLLS PSGTSCSYPS EDSSEDEDDE 1151 1200 ENSTTRP00000015541/1-296 ---------- ---------- ---------- -------LML PEEIFG---- BACU017652/1-860 EEEQEVDVEG HKPPEGEEEE EESRDPEDDE EEDEETGVLL GDPLVGGGRF ENSBTAP00000044054/1-923 EEEQEVDVEG HKPPEGEEEE DEGREPEDDE EEDEETGVLL ADPLVGGGRF ENSP00000414750/1-1001 EEEQEVDVEG HKPPEGEEEE -EGRDPDDDE EEDEETEVLL GDPLVGGGRF bmy_21121T0/1-570 EEEQEVDVEG HKPPEGEEEE EESRDPEDDE EEDEETGVLL GDPLVGGGRF 1201 1250 ENSTTRP00000015541/1-296 -------EKD QGNDTRVNED NVWPR----- ---------- ---------- BACU017652/1-860 LQGRGLSEKG SSRDRPPAAA GAFPLALNSS RLLQEDRKLG DPGGGDLPPX ENSBTAP00000044054/1-923 LQGRGLSEKG SSRDRPLAAA GPFPLALNSS RLLQEDGKLG DPGGPDLPP- ENSP00000414750/1-1001 LQGRGPSEKG SSRDRAPAVA GAFPLGLNSS RLLQEDGKLG DP-GSDLPP- bmy_21121T0/1-570 LQGRGLSEKG SSRDRPPIAA GAFPLALNSS RLLQEDRKLG DPGGSDLPP- 1251 1300 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 XXXXXXXXXX XXXXXXXXXX APAPAAGLPE IKRRP----- ---------- ENSBTAP00000044054/1-923 ---PPPPPLA SQKPSGGLGS SPGSPVHHPS LEEQPSYKDN QKTKENNQVI ENSP00000414750/1-1001 ---PPPPPLA PQKASGGGSS SPGSPVHHPS LEEQPSYKDS QKTKENNQVI bmy_21121T0/1-570 ---PPPPPLA SQKLSGGLSS SPGSPVHHPS LEEQPSYKDN QKTKENNQVI 1301 1350 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 LSTKDDNNFS DKNKEHSFFI TDSDAS-GDF WRERSGEHTQ ETNSPHSLKK ENSP00000414750/1-1001 VSTKDDNSFS DKNKEHSFFI TDSDASGGDF WRERSGEHTQ ETNSPHSLKK bmy_21121T0/1-570 LSTKDDNNFS DKNKEHSFFI TDSDASGGDF WRERSGEHTQ ETNSPHSLRK 1351 1400 ENSTTRP00000015541/1-296 ---------- ---------- ---------- ---------- ---------- BACU017652/1-860 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044054/1-923 DVENMGKVEE LQKVLFEQID LRRRLEQEFQ VLKGNTSFPV FNNFQDQMKR ENSP00000414750/1-1001 DVENMGK-EE LQKVLFEQID LRRRLEQEFQ VLKGNTSFPV FNNFQDQMKR bmy_21121T0/1-570 DVENMGK-EE LQKVLFEQID LRRRLEQEFQ VLKGNTSFPV FNNFQDQMKR 1401 1450 ENSTTRP00000015541/1-296 ---------- ---------- ---------- --------- BACU017652/1-860 ---------- ---------- ---------- --------- ENSBTAP00000044054/1-923 ELAYREEMVQ QLQIIPYAAS LIRKEKLGAH LSKS----- ENSP00000414750/1-1001 ELAYREEMVQ QLQIVSCIST ---------- --------- bmy_21121T0/1-570 ELAYREEMVQ QLQIAVLMFA QQQIGASGTQ QNDFTVKKA