KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:38 2014 Check: 00 .. Name: ENSP00000292513/1-402 Len: 410 Check: 7240 Weight: 1.00 Name: ENSBTAP00000044062/1-407 Len: 410 Check: 8061 Weight: 1.00 Name: ENSTTRP00000007511/1-408 Len: 410 Check: 7552 Weight: 1.00 Name: bmy_04826T0/1-407 Len: 410 Check: 8122 Weight: 1.00 // 1 50 ENSP00000292513/1-402 MSPCGPLNLS LAGEATTCAA PWVPNTSAVP PS---GASPA LPIFSMTLGA ENSBTAP00000044062/1-407 MSPCGPLNLS LAGEATTCTA PGAPNTSAGP PLGLAGASPA LPIFSMTLGA ENSTTRP00000007511/1-408 MSPYGPLNLS LAGEATTCTA PGASNASAGP LSDLAGASPA LPIFSMTLGA bmy_04826T0/1-407 MSPCGPLNLS LAGEATTCTA PGASNASAGP LSDLAGVSPA LPIFSMTLGA 51 100 ENSP00000292513/1-402 VSNLLALALL AQAAGRLRRR RSAATFLLFV ASLLATDLAG HVIPGALVLR ENSBTAP00000044062/1-407 VSNVLALGLL AQAAGRLRRR RSAATFLLFV ASLLATDLAG HVIPGALVLR ENSTTRP00000007511/1-408 VSNVLALALL AQVAGRLRRR RSAATFLLFV ASLLATDLVG HVIPGALVLH bmy_04826T0/1-407 VSNVLALALL AQAAGRLRRR RSAATFLLFV ASLLATDLAG HVIPGALVLR 101 150 ENSP00000292513/1-402 LYTAGRAPAG GACHFLGGCM VFFGLCPLLL GCGMAVERCV GVTRPLLHAA ENSBTAP00000044062/1-407 LYAAGRAPAG GACHFLGGCM VFFGLCPLLL GCGMAVERCV GVTRPLLHAA ENSTTRP00000007511/1-408 LYAAGRSPAG GACHFLGGCM VFFGLCPLLL GCGMAVERCV GVTRPLLHAA bmy_04826T0/1-407 LYAAGRSPAG GACHFLGGCM VFFGLCPLLL GCGMAVERCV GVTRPLLHAA 151 200 ENSP00000292513/1-402 RVSVARARLA LAAVAAVALA VALLPLARVG RYELQYPGTW CFIGLGPPGG ENSBTAP00000044062/1-407 RVSVARARLA LAALAAVALA VALLPLARVG RYELQYPGTW CFIGLGPAGG ENSTTRP00000007511/1-408 GVSVARARLA LAALAAVALA VALLPLARVG RYELQYPGTW CFIGLGPAGG bmy_04826T0/1-407 GVSVARARLA LAALAAVALA VALLPLARVG RYELQYPGTW CFIGLGPAGG 201 250 ENSP00000292513/1-402 WRQALLAGLF ASLGLVALLA ALVCNTLSGL ALLRARW-RR RSRRPPPAS- ENSBTAP00000044062/1-407 WRQALLAGLF AGLGLASLLA ALLCNTLSGL ALLRARWRRR RSRRHFPAGG ENSTTRP00000007511/1-408 WRQSLLAGLF AGLGLASLLA ALVCNTLSGL ALLRARW-CR RSRRHFPAG- bmy_04826T0/1-407 WRQSLLAGLF AGLGLASLLA ALVCNTLSGL ALLRARW-RR RSRRHFPAG- 251 300 ENSP00000292513/1-402 GPDSRRRWGA HGPRSA---S ASSASSIASA STFFGGSRSS GSARRARAHD ENSBTAP00000044062/1-407 GPDSRRHWGG RGPRSA---S ASSASSVASA SAAPGGSPSR GSSRKARAHD ENSTTRP00000007511/1-408 GSDSRRHWGG RGPRPASASS ASSASSVASA SAAPGGSLGR GSARRARAHD bmy_04826T0/1-407 GPDSRRHWGG SGPRPASASS ASSASSVASA SAAPGGSLGR GSARRARAHD 301 350 ENSP00000292513/1-402 VEMVGQLVGI MVVSCICWSP MLVLVALAVG GWSSTSLQRP LFLAVRLASW ENSBTAP00000044062/1-407 VEMVGQLVGI MVVSCICWSP LLVVVVLAVA GWGSSSLQRP LFLAVRLASW ENSTTRP00000007511/1-408 VEMVGQLVGI MVVSCICWSP LLVLVVLAIA GWGSSSLQQP LFLAVRLASW bmy_04826T0/1-407 VEMVGQLVGI MVVSCICWSP LLVLVVLAIA GWGSSSLQRP LFLAVRLASW 351 400 ENSP00000292513/1-402 NQILDPWVYI LLRQAVLRQL LRLLPPRAGA KGGPAGLGLT PSAWEASSLR ENSBTAP00000044062/1-407 NQILDPWVYI LLRQAVLRQL LRLLPSRAGA KGSHGGLGLN KSTWEASSLR ENSTTRP00000007511/1-408 NQILDPWVYI LLRRAVLRQL LCLLPSRAGA KGSPRELGLM RSAWEANSLR bmy_04826T0/1-407 NQILDPWVYI LLRRAVLHQL LRLLPSRAGA KGSPTGLGLT -SAWEANSLR 401 450 ENSP00000292513/1-402 SSRHSGLSHF ENSBTAP00000044062/1-407 SSRHSGLSSF ENSTTRP00000007511/1-408 SSRHSGLSHF bmy_04826T0/1-407 SSRHSGLSHF