KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:38 2014 Check: 00 .. Name: ENSTTRP00000013511/1-399 Len: 434 Check: 1038 Weight: 1.00 Name: bmy_09214T0/1-309 Len: 434 Check: 313 Weight: 1.00 Name: ENSP00000371811/1-434 Len: 434 Check: 9342 Weight: 1.00 Name: ENSBTAP00000044088/1-430 Len: 434 Check: 9793 Weight: 1.00 // 1 50 ENSTTRP00000013511/1-399 ---------- ---------- ---------- ----VAAAVV GVALAGAGAT bmy_09214T0/1-309 ---------- ---------- ---------- ---------- -MQRQGSGA- ENSP00000371811/1-434 MAAAAGSCAR VAAWGGKLRR GLAVSRQAVR SPGPLAAAVA GAALAGAGAA ENSBTAP00000044088/1-430 MAAAGGS--R LAAWGERLRR GFAAGRRAWP GPGPVAAAVA GVAVAGAGAA 51 100 ENSTTRP00000013511/1-399 WYHGRVNMAA PQGDLTVVAQ KSVDSGEM-K GKPSPRKQRF MQFSSLEHGG bmy_09214T0/1-309 ---------- ---------- --LQRGHV-V APTDTERPRP LSF------- ENSP00000371811/1-434 WHHSRVSVAA RDGSFTVSAQ KNVEHGIIYI GKPSLRKQRF MQFSSLEHEG ENSBTAP00000044088/1-430 WYHGRVNVAA PQGSLTVLAQ RSVNPGEI-T GKLSPRKQRF MQFSSLEYGG 101 150 ENSTTRP00000013511/1-399 EYYMTPRDFL FSVMFDQIER KTLVKRLTNK DIEDVLAGIK GAGCGSTFFR bmy_09214T0/1-309 ---------- FRPLLGETQG RPA------- ---DSFP--- ---CGQPL-- ENSP00000371811/1-434 EYYMTPRDFL FSVMFEQMER KTSVKKLTKK DIEDTLSGIQ TAGCGSTFFR ENSBTAP00000044088/1-430 EYYMTPRDFL FSVMFDHIQR KSSVKRLTDK DIEDTLAGIK KAGCGSTFFR 151 200 ENSTTRP00000013511/1-399 DLGDKGLVSY TEYLFLLTIL TKPHTGFHVA FQMLDADGDE MVEKKEFFKL bmy_09214T0/1-309 ---------- -----LLKLL SNPASK---A FQ-------P EIENMDQYKL ENSP00000371811/1-434 DLGDKGLISY TEYLFLLTIL TKPHSGFHVA FKMLDTDGNE MIEKREFFKL ENSBTAP00000044088/1-430 DLGDKGLISY TEYLFLLTIL TKPHSGFHVA FKMLDADGDE MVEKKEFFKL 201 250 ENSTTRP00000013511/1-399 QKIISKQDDS KTRITNETEC QEPTVKEPEI NTTLQIRFFG KRGERKLHYK bmy_09214T0/1-309 QKIISKQDDL KTTITNETEC QEPTVKEPEI NTTLQIHFFG KRGERKLHYK ENSP00000371811/1-434 QKIISKQDDL MTVKTNETGY QEAIVKEPEI NTTLQMRFFG KRGQRKLHYK ENSBTAP00000044088/1-430 QKIISKQDDL KTAITDETEC QEQTVQEPEI NTTLQIRFFG KRGERKLHYK 251 300 ENSTTRP00000013511/1-399 EFRRFMESLQ TEVQEMEFLQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09214T0/1-309 EFRRFMENLQ TEVQEMEFLQ FSKGLSFMRK EDFAEWLLFF TNTGNKDVYW ENSP00000371811/1-434 EFRRFMENLQ TEIQEMEFLQ FSKGLSFMRK EDFAEWLLFF TNTENKDIYW ENSBTAP00000044088/1-430 EFRRFMENLQ AEVQEMEFLQ FSKGLSFMRK EDFAEWLLFF TDTENKDVYW 301 350 ENSTTRP00000013511/1-399 XXXXXXXXXX XSISLDEFKS FCHFATHLED FAIAMQMFSL AHRPVRLXXX bmy_09214T0/1-309 KNVSEKLSAG ESISLDEFKS FCHFATHLED FAIAMQMFSL AHRPVRLAEF ENSP00000371811/1-434 KNVREKLSAG ESISLDEFKS FCHFTTHLED FAIAMQMFSL AHRPVRLAEF ENSBTAP00000044088/1-430 KNVREKLSAG ENISLEEFKS FCHFATHLED FAIAMQMFSL AHRPVRLAEF 351 400 ENSTTRP00000013511/1-399 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09214T0/1-309 KRAVKVATGQ ELSNNILDAV FKIFDLDGDE CLSHEEFLGV LKNRMHRGLW ENSP00000371811/1-434 KRAVKVATGQ ELSNNILDTV FKIFDLDGDE CLSHEEFLGV LKNRMHRGLW ENSBTAP00000044088/1-430 KRAVKVATGQ ELSNNILDTV FKIFDLDGDE CLSHEEFLGV LKNRMHRGLW 401 450 ENSTTRP00000013511/1-399 VPQQLSIQEY WKCVKKESIK GVKEVWKQAG RGPL bmy_09214T0/1-309 VPQQLSIQEY WKCVKKESIK GVKEVWKQAG RGLL ENSP00000371811/1-434 VPQHQSIQEY WKCVKKESIK GVKEVWKQAG KGLF ENSBTAP00000044088/1-430 VPQHLGIQEY WKCVKKESIK GVKEVWKQAG KDL-