KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:40 2014 Check: 00 .. Name: ENSP00000381567/1-1093 Len: 1573 Check: 5977 Weight: 1.00 Name: ENSBTAP00000044097/1-1094 Len: 1573 Check: 6858 Weight: 1.00 Name: bmy_01243T0/1-1009 Len: 1573 Check: 2854 Weight: 1.00 Name: ENSTTRP00000014517/1-1091 Len: 1573 Check: 6027 Weight: 1.00 Name: BACU015111/1-1537 Len: 1573 Check: 898 Weight: 1.00 // 1 50 ENSP00000381567/1-1093 MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSIWAE TIPYGEPGIS ENSBTAP00000044097/1-1094 MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSAWAE TIPYGEPGIS bmy_01243T0/1-1009 ILFSFLIYIY FFVK------ ---------- ---------- -------GIS ENSTTRP00000014517/1-1091 MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSAWAE TIPYGEPGIS BACU015111/1-1537 MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSAWAE TIPYGEPGIS 51 100 ENSP00000381567/1-1093 SPVSGGWDTS TWGLKSNTEP QSPPIASPKA ITKPVRRTVV DESENFFSAF ENSBTAP00000044097/1-1094 PPVSGGWDTS TWGLKSNTEP QSQPVVSPKA ITKPVRRTVV DESENFFSAF bmy_01243T0/1-1009 PPVSGGWDTS TWGLKSNTEP QSQPVASPKA ITKPVRRTVV DESENFFSAF ENSTTRP00000014517/1-1091 PPVSGGWDTS TWGLKSNTEP QNQPVASPKA ITKPVRRTVV DESENFFSAF BACU015111/1-1537 PPVSGGWDTS TWGLKSDTEP QSQPVASPKA ITKPVRRTVV DESENFFSAF 101 150 ENSP00000381567/1-1093 LSPTDVQTIQ KSPVVSKPPA KSQRPEEEVK SSLHESLHIG QSRTPETTES ENSBTAP00000044097/1-1094 LSPADVQTIQ KSPVVSKPPA KSQRPEEEVK STLQESLHTG QSRTTEATES bmy_01243T0/1-1009 LSPTDVQTIQ KSPVVSKPPA KSQRPEEEVK STLQESLHAG QSRTTEAPES ENSTTRP00000014517/1-1091 LSPTDVQTIQ KSPVVSKPPA KSQRPEEEVK STLQESLHAG QSRTTEAAES BACU015111/1-1537 LSPTDVQTIQ KSPVVSKPPA KSQRPEEEVK SPLQESLHAG QSRTTEAPES 151 200 ENSP00000381567/1-1093 QVKDSSLCVS GETLAAGTSS PKTEGKHEET VNKESDMKVP TVSLKVSESV ENSBTAP00000044097/1-1094 KVKDSPPCVS KETLAVSTLS PKTEDKHEET VTKESDTKVP TVHLKVSESV bmy_01243T0/1-1009 KVEDSPPCVS GETLTASTLS PKTKGKHEET LNKESDTKVS TVHLKVSESV ENSTTRP00000014517/1-1091 KVEDSPPFVS GETLAASTLS PKTEGKHEET LNKESDTKVS AVHLKVSESI BACU015111/1-1537 KVEDSPPCVS GETLTASTLS PKTEGKHEET LNKESDTKVS TVHLKVSESV 201 250 ENSP00000381567/1-1093 IDVKTTMESI SNTSTQSLTA ETKDIALEPK EQKHEDRQSN TPSPPVSTFS ENSBTAP00000044097/1-1094 MNVKTTRENV SNMSTQPLTA ETKDMALEPK EQKHEDRQSN TPSPPVSTFS bmy_01243T0/1-1009 INVKTTRENV SNMPTQPLTA ETKDMALEPK EQKHEDRQSN TPSPPVSTFS ENSTTRP00000014517/1-1091 IHVKTTRENV SNMPTQPLTA ETKDMALEPK EQKHEDRQSN TPSPPVSTFS BACU015111/1-1537 INVKTTRENV SNMPTQPLTA EAKDMALEPK EQKHEDRQSN TPSPPVSTFS 251 300 ENSP00000381567/1-1093 SGTSTTSDIE VLDHESVISE SSASSRQETT DSKSSLHLMQ TSFQLLSASA ENSBTAP00000044097/1-1094 SGTSTTSDIE VLDHESVISE SSASSRQEHT DSKSSLHLMQ TSFQLLSASA bmy_01243T0/1-1009 SGTSTTSDIE VLDHESVISE SSASSRQETT DSKSSLHLMQ TSFQLLSASA ENSTTRP00000014517/1-1091 SGTSTTSDIE VLDHESVISE SSASSRQETT DSKSSLHLMQ TSFQLLSASA BACU015111/1-1537 SGTSTTSDIE VLDHESVISE SSASSRQETT DSKSSLHLMQ TSFQLLSASA 301 350 ENSP00000381567/1-1093 CPEYNRLDDF QKLTESCCSS DAFERIDSFS VQSLDSRSVS EINSDDELSG ENSBTAP00000044097/1-1094 CPEYNRLDDF QKLTESCCSS DAFERIDSFS VQSLDSRSVS EINSDDELSG bmy_01243T0/1-1009 CPEYNRLDDF QKLTESCCSS DAFERIDSFS VQSLDSRSVS EINSDDELSG ENSTTRP00000014517/1-1091 CPEYNRLDDF QKLTESCCSS DAFERIDSFS VQSLDSRSVS EINSDDELSG BACU015111/1-1537 CPEYNRLDDF QKLTESCCSS DAFERIDSFS VQSLDSRSVS EINSDDELSG 351 400 ENSP00000381567/1-1093 KGYALVPIIV NSSTPKSKTV ESAEGKSEEV NETLVIPTEE AEMEESGRSA ENSBTAP00000044097/1-1094 KGYALVPIIL NSSTPKTKTI ESVEGKPEEA NETLIMPNEE TEMEESGRSA bmy_01243T0/1-1009 KGYALVPIIV NSSTPKAKTV ESVEGKPEEA NETLIVPTEE TEMEESGRSA ENSTTRP00000014517/1-1091 KGYALVPIIV NSSTPKAKTV ESVEGKPEEA NETLIMPTEE TEMEESGRSA BACU015111/1-1537 KGYALVPIIV NSSTPKAKTV ESVEGKPEEA NETLIMPTEE TEMEESGRSA 401 450 ENSP00000381567/1-1093 TPVNCEQPDI LVSSTPINEG QTVLDKVAEQ CEPAESQPEA LSEKEDVCKT ENSBTAP00000044097/1-1094 TPVNCEQPDI LVSSTSVNEG HAVLAEEAEQ PEAS-SQPEA PSEKEDVCKT bmy_01243T0/1-1009 TPVNCEQPDV LVSSTPVNEG HTVLDKVAEQ PEAPESQPEA LSEKEDVFKT ENSTTRP00000014517/1-1091 TPVNCEQPDI LVSSTPVNEG HRVLDKVAEQ PKVPESEPEA LSEKEDVFKT BACU015111/1-1537 TPVNCEQPDV LVSSTPVNEG HTVLDKVAEQ PEAPESQSEA LSEKEDVFKT 451 500 ENSP00000381567/1-1093 VEFLNEKLEK REAQLLSLSK EKALLEEAFD NLKDEMFRVK EESSSISSLK ENSBTAP00000044097/1-1094 VEFLNEKLDK REAQLLSLSK EKALLEEAYD NLKDEMIRVK EESSSISSLK bmy_01243T0/1-1009 VEFLNEKLDK REAQLLSLSK EKALLEEAYD NLKDEMIRVK EEXSSISSLK ENSTTRP00000014517/1-1091 VEFLNEKLDK -TAQLLSLSK EKALL-EAYD NLKDEMIRVK EESSSISSLK BACU015111/1-1537 VEFLNEKLDK REAQLLSLSK EKALLEEAYD NLKDEMIRVK EESSSISSLK 501 550 ENSP00000381567/1-1093 DEFTQRIAEA EKKVQLACKE RDAAKKEIKN IKEELATRLN SSETADLLKE ENSBTAP00000044097/1-1094 DEFTQRIAEA EKKVQLACKE RDAAKKEIKS IKEELATRLN SSETADLLKE bmy_01243T0/1-1009 DEFTQRIAEA EKKVQLACKE RDAAKKEIKS IKDELATRLN SSETADLLKE ENSTTRP00000014517/1-1091 DEFTQRIAEA EKKVQLACKE RDAAKKEIKS IKEELATRLN SSETADLLKE BACU015111/1-1537 DEFTQRIAEA EKKVQLACKE RDAAKKEIKN IKEELATRLN SSETADLLKE 551 600 ENSP00000381567/1-1093 KDEQIRGLME EGEKLSKQQL HNSNIIKKLR AKDKENENMV AKLNKKVKEL ENSBTAP00000044097/1-1094 KDEQIRGLME EGEKLSKQQL HNSNIIKKLR TKDKENENII AKLNKKVQEL bmy_01243T0/1-1009 KDEQIRGLME EGEKLSKQQL HNSNIIKKLR AKDRENENII AKLNKKVKEL ENSTTRP00000014517/1-1091 KDEQIRGLME EGEKLSKQQL HNSNIIKKLR AKDRENENII AKLNKKVKDL BACU015111/1-1537 KDEQIRGLME EGEKLSKQQL HNSNIIKKLR AKDRENENII AKLNKKVKEL 601 650 ENSP00000381567/1-1093 EEELQHLKQV LDGKEEVEKQ HRENIKKLNS MVERQEKDLG RLQVDMDELE ENSBTAP00000044097/1-1094 EEELQHLKQV LDGKEEVEKQ HRENIKKLNS VVERQEKDLG RLHIDINELE bmy_01243T0/1-1009 EEELQHLKQV LDGKEEVEKQ HRENIKKLNS VVERQEKDLG RLQVDMNELE ENSTTRP00000014517/1-1091 EEELQHLKQV LDGKEEVEKQ HRENIKKLNS VVERQEKDLG RLQVDMNELE BACU015111/1-1537 EEELQHLKQV LDGKEEVEKQ HRENIKKLNS VVERQEKDLG RLQVDMNELE 651 700 ENSP00000381567/1-1093 EKNRSIQAAL DSAYKELTDL HKANAAKDSE AQEAALSREM KAKEELSAAL ENSBTAP00000044097/1-1094 EKNRSIQAAL DSAYKELTDL HKANAAKDSE AQEAALSREM RAKEELSAAL bmy_01243T0/1-1009 EKNRSIQAAL DSAYKELTDL HKANAAKDSE AQEAALSRET RAKEELSAAL ENSTTRP00000014517/1-1091 EKNRSIQAAL DSAYKELTDL HKANAAKDSE AQEAALSREM RAKEELSAAL BACU015111/1-1537 EKNRSIQAAL DSAYKELTDL HKANAAKDSE AQEAALSRET RAKEELSAAL 701 750 ENSP00000381567/1-1093 EKAQEEARQQ QETLAIQVGD LRLALQRTEQ AAARKEDYLR HEIGELQQRL ENSBTAP00000044097/1-1094 EKAQEEARQQ QETLAIQVGD LRLALQRAEQ TAARKEDYLR HEISELQQRL bmy_01243T0/1-1009 EKAQEEARQQ QETLVIQVGD LRLALQRAEQ AAARKEDYLR HEISELQQRL ENSTTRP00000014517/1-1091 EKAQEEARQQ QETLVIQVGD LRLALQRAEQ AAARKEDYLR HEISELQQRL BACU015111/1-1537 EKAQEEARQQ QETLVIQVGD LRLALQRAEQ AAARKEDYLR HEISELQQRL 751 800 ENSP00000381567/1-1093 QEAENRNQEL SQSVSSTTRP LLRQIENLQA TLGSQTSSWE KLEKNLSDRL ENSBTAP00000044097/1-1094 QEAENRNQEL SQSVSSTTRP LLRQIENLQA TLGSQTSSWE KLEKNLSDRL bmy_01243T0/1-1009 QEAENRNQEL SQSVSSTTRP LLRQIENLQA TLGSQTSSWE KLEKNLSDRL ENSTTRP00000014517/1-1091 QEAENRNQEL SQSVSSTTRP LLRQIENLQA TLGSQTSSWE KLEKNLSDRL BACU015111/1-1537 QEAENRNQEL SQSVSSTTRP LLRQIENLQA TLGSQTSSWE TLEKNLSDRL 801 850 ENSP00000381567/1-1093 GESQTLLAAA VERERAATEE LLANKIQMSS MESQNSLLRQ ENSRFQAQLE ENSBTAP00000044097/1-1094 GESQTLLAAA VERERAATEE LLANKIQMSS MESQNSLLRQ ENSRFQAQLE bmy_01243T0/1-1009 GESQTLLAAA VERERAATEE LLANKIQMSS MESQNSLLRQ ENSRFQAQLE ENSTTRP00000014517/1-1091 GESQTLLAAA VERERAATEE LLANKIQMSS VESQNSLLRQ ENSRLQAQLE BACU015111/1-1537 GESQTLLAAA VERERAATEE LLANKIHMSS MESQNSLLRQ ENSRFQAQLE 851 900 ENSP00000381567/1-1093 SEKNRLCKLE DENNRYQVEL ENLKDEYVRT LEETRKEKTL LNSQLEMERM ENSBTAP00000044097/1-1094 SEKNRLRKLE DENNRYQVEL ENLKDEYVRT VEETRKEKTL LNSQLEMEKM bmy_01243T0/1-1009 SEKNRIRKLE DENNRYQVEL ENLKGEYVRT LEETRKEKTL LNSQLEMEKM ENSTTRP00000014517/1-1091 SEKNRLRKLE DENNRYQVEL ENLKGEYVRT LEETRKEKTL LNSQLEMEKM BACU015111/1-1537 SEKNRLRKLE DENNRYQVEL ENLKGEYVRT LEETRKEKTL LNSQLEMEKM 901 950 ENSP00000381567/1-1093 KVEQERKKAI FTQETIKE-- KERKPFSVSS TPTMSRSSSI SGVDMAGLQT ENSBTAP00000044097/1-1094 KVEQERKKAI FTQEAVKEKP KERKPFSVSS TPTISRSSSI SGVDMAGLQT bmy_01243T0/1-1009 KVEQERKKAV FTQEAIKE-- KERKPFSVSS TPTMSRSSSI SGVDMAGLQT ENSTTRP00000014517/1-1091 KVEQERKKAV FTQEAIKE-- KERKPFSVSS TPTMSRSSSI SGVDMAGLQT BACU015111/1-1537 KAEQERKKAI FTQEAIKE-- K--------- ---------- ---------- 951 1000 ENSP00000381567/1-1093 SFLSQDESHD HSFGPMPISA NGSNLYDAVR MGAGSSIIEN LQSQLKLREG ENSBTAP00000044097/1-1094 SFLSQDEPHD HSFGPMSGSA NGSNLYDAVR MGAGSSIIEN LQSQLKLREG bmy_01243T0/1-1009 SFMS------ ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 SFMSQDELHD HSFGPMSVSA NGSNLYDAVR MGAGSSIIEN LQSQLKLREG BACU015111/1-1537 -----DELHD HSFGPMSVSA NGSNLYDAVR MGAGSSIIEN LQSQLKLREG 1001 1050 ENSP00000381567/1-1093 EITHLQLEIG NLEKTRSIMA EELVKLTNQN DELEEKVKEI PKLRTQLRDL ENSBTAP00000044097/1-1094 EISHLQLEIG NLEKTRSIMA EELVKLTNQN DELEEKVKEI PKLRMQLRDL bmy_01243T0/1-1009 -----QLEIG NLEKTRSIMA EELVKLTNQN DELEEKVKEI PKLRTQLRDL ENSTTRP00000014517/1-1091 EITHLQLEIG NLEKTRSIMA EELVKLTNQN DELEEKVKEI PKLRTQLRDL BACU015111/1-1537 EITHLQLEIG NLEKTRSIMA EELVKLTNQN DELEEKVKEI PKLRTQLRDL 1051 1100 ENSP00000381567/1-1093 DQRYNTILQM YGEKAEEAEE LRLDLEDVKN MYKTQIDELL RQSLS----- ENSBTAP00000044097/1-1094 DQRYNTILQM YGEKAEEAEE LRLDLEDVKN MYKTQIDELL RQRLS----- bmy_01243T0/1-1009 DQRYNTILQM YGEKAEEAEE LRLDLEDVKN MYKTQIDELL RQRLS----- ENSTTRP00000014517/1-1091 DQRYNTILQM YGEKAEEAEE LRLDLEDVKN MYKTQIDELL RQRLS----- BACU015111/1-1537 DQRYNTILQM YGEKAEEAEE LRLDLEDVKN MYKTQIDELL RQRLSLEVAM 1101 1150 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 FMLLVFGALL HEVPLSGQDE VPPQADGILG TPLFNYASLR LPEEHIPFFL 1151 1200 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 HNNRHIATVC KKDSHCPYKK HLENLKYCWG YEKSCRPEFR FSYPVCTYVD 1201 1250 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 MGWTDTLESA QEIFWKQADF GYSGERLEEL HVLCQPKGMN DSSLVCSRYL 1251 1300 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 QYCRATNLYL DLRNIKRNHD RFKEDFFQSG EIGGHCKLDI RMLMSQGQRK 1301 1350 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 SPLQSWFAEL QSYTQLNFRP VEDAKCDIVI EKPTYFMKLD AGVNMYHHFC 1351 1400 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 DFINLYITQH INNSFSTDVH VVMWDTSSYG YGDLFSDTWK AFTDYDVIHL 1401 1450 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 KTYDSKRDGK IRVTILARST EYRKILNQNE LVNALKTVST FEVQIVDYKY 1451 1500 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 KELGFLDQLR ITHNTDIFIG MHGAGLTHLL FLPDWAAVFE LYNCGDERCY 1501 1550 ENSP00000381567/1-1093 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044097/1-1094 ---------- ---------- ---------- ---------- ---------- bmy_01243T0/1-1009 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014517/1-1091 ---------- ---------- ---------- ---------- ---------- BACU015111/1-1537 LDLARLRGVY YITWRRQSKV FPQDKGHHPT LGEHPKFTNY SFDVEEFMYL 1551 1600 ENSP00000381567/1-1093 ---------- ---------- --- ENSBTAP00000044097/1-1094 ---------- ---------- --- bmy_01243T0/1-1009 ---------- ---------- --- ENSTTRP00000014517/1-1091 ---------- ---------- --- BACU015111/1-1537 VLQAADHVLQ HPKWPFKKKH DEL