KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:44 2014 Check: 00 .. Name: bmy_05229T0/1-454 Len: 624 Check: 3373 Weight: 1.00 Name: ENSTTRP00000000502/1-609 Len: 624 Check: 2983 Weight: 1.00 Name: ENSP00000320885/1-616 Len: 624 Check: 6467 Weight: 1.00 Name: ENSBTAP00000044166/1-614 Len: 624 Check: 3806 Weight: 1.00 // 1 50 bmy_05229T0/1-454 ---------- ---------- -MKFAYNCY- ---------- -----HFKEV ENSTTRP00000000502/1-609 MSSPGGRGKK KGSGGPSSPV PPRPPPHCLA PSRPAPRPAP SPQSPHKRNL ENSP00000320885/1-616 MNSPGGRGKK KGSGGASNPV PPRPPPPCLA PAPPAAGPAP PPESPHKRNL ENSBTAP00000044166/1-614 MNSPGGRGKK KGSGGPSSPV PPRPPPPCQA RSRPAPKPAP PPQSPHKRNL 51 100 bmy_05229T0/1-454 SYTYFDYAEF LG-------- ---------- ---------- ---------- ENSTTRP00000000502/1-609 Y--YFSYPLF VGFALLRLVA FHLGLLFVWL CQRFSRALMA AKRSSGAAPA ENSP00000320885/1-616 Y--YFSYPLF VGFALLRLVA FHLGLLFVWL CQRFSRALMA AKRSSGAAPA ENSBTAP00000044166/1-614 Y--YFSYPLF LGFALLRLVA FHLGLLFVWL CQRFSRALMA AKRSSGA--A 101 150 bmy_05229T0/1-454 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000502/1-609 PASASPPAPV PGGEAERVRA FHKQAFEYIS VALRIDEDEK VGQKEQAVEW ENSP00000320885/1-616 PASASAPAPV PGGEAERVRV FHKQAFEYIS IALRIDEDEK AGQKEQAVEW ENSBTAP00000044166/1-614 PASASPPAPV PGGEAERVRA FHKQAFEYIS VALRIDEDEK VGQKDQAVEW 151 200 bmy_05229T0/1-454 ---------- ---------- EQCDRARRLQ AKMMTNLVMA KDRLQLLEKL ENSTTRP00000000502/1-609 YKKGIEELEK GIAVVVTGQ- EHGERARRL- AKMM-NWVMK DLQLK---KL ENSP00000320885/1-616 YKKGIEELEK GIAVIVTGQG EQCERARRLQ AKMMTNLVMA KDRLQLLEKM ENSBTAP00000044166/1-614 YKKGIEELEK GIAVVVTGQG EQCERARRLQ AKMMTNLVMA KDRLQLLEKL 201 250 bmy_05229T0/1-454 QPVLQFSKSQ TDVYNDNTNL TCRNGHLQSE SGAVPKRKDP LTHTSNSLPR ENSTTRP00000000502/1-609 QPVLQFSKSQ TDVYNDSTNL TCRNGHLQSE SGAVPKRKDP LTHTSNSLPR ENSP00000320885/1-616 QPVLPFSKSQ TDVYNDSTNL ACRNGHLQSE SGAVPKRKDP LTHTSNSLPR ENSBTAP00000044166/1-614 QPSLQFSKSQ TDVYNDSTNL TCRNGHLQSE SGAVPKRKDP LTHASNSLPR 251 300 bmy_05229T0/1-454 SKTVMKTGST ALSGHHRAPS CSGLSMVSGV RQGPGPATAT HKSTPKTNRT ENSTTRP00000000502/1-609 SKTVMKTGST GLSGHHRAPS CSGLSMVSGV RQGPGPATAT HKSTPKTNRT ENSP00000320885/1-616 SKTVMKTGSA GLSGHHRAPS YSGLSMVSGV KQGSGPAPTT HKGTPKTNRT ENSBTAP00000044166/1-614 SKTVMKTGPT GLSGHHRAPS CSGLSMVSGV RQGPGSAAAT HKSTPKTNRT 301 350 bmy_05229T0/1-454 NKPSTPTTAA RKKKDLKNFR NVDSNLANLI MNEIVDNGTA VKFDDIAGQE ENSTTRP00000000502/1-609 NKPSTPTTAA RKKKDLKNFR NVDSNLANLI MNEIVDNGTA VKFDDIAGQE ENSP00000320885/1-616 NKPSTPTTAT RKKKDLKNFR NVDSNLANLI MNEIVDNGTA VKFDDIAGQD ENSBTAP00000044166/1-614 NKPSTPTTAA RKKKDLKNFR NVDSNLANLI MNEIVDNGTA VKFDDIAGQE 351 400 bmy_05229T0/1-454 LAKQALQEIV ILPSLRPE-- ---------- ---------- ---AKAVAAE ENSTTRP00000000502/1-609 LAKQALQEIV ILPSLRPELF TGLRAPARGL LLFGPPGNGK TMLAKAVAAE ENSP00000320885/1-616 LAKQALQEIV ILPSLRPELF TGLRAPARGL LLFGPPGNGK TMLAKAVAAE ENSBTAP00000044166/1-614 LAKQALQEIV ILPSLRPELF TGLRAPARGL LLFGPPGNGK TMLAKAVAAE 401 450 bmy_05229T0/1-454 SNATFFNISA ASLTSKYVGE GEKLVRALFA VARELQPSII FIDEVDSLLC ENSTTRP00000000502/1-609 SSATFFNISA ASLT-KYVGE GEKLVRALFA VARELQPSII FIDEVDSLLC ENSP00000320885/1-616 SNATFFNISA ASLTSKYVGE GEKLVRALFA VARELQPSII FIDEVDSLLC ENSBTAP00000044166/1-614 SNATFFNISA ASLTSKYVGE GEKLVRALFA VARELQPSII FIDEVDSLLC 451 500 bmy_05229T0/1-454 ERREGEHDAS RRLKTEFLIE FDGVQSAGDD RVLVMGATNR PQELDEAVLR ENSTTRP00000000502/1-609 ERREGEHDAS RRLKTEFLIE FDGVQSAGDD RVLVMGATNR PQELDEAVLR ENSP00000320885/1-616 ERREGEHDAS RRLKTEFLIE FDGVQSAGDD RVLVMGATNR PQELDEAVLR ENSBTAP00000044166/1-614 ERREGEHDAS RRLKTEFLIE FDGVQSAGDD RVLVMGATNR PQELDEAVLR 501 550 bmy_05229T0/1-454 RFTKRELSKN CYFNRYMCEA TRLLLLKNLL CKQGSPLTQK ELAQLARMTD ENSTTRP00000000502/1-609 RFTKR----- -VYVSLPNEE XXXXXXXXXX XXXXXXXXXX XLAQLARMTD ENSP00000320885/1-616 RFIKR----- -VYVSLPNEE TRLLLLKNLL CKQGSPLTQK ELAQLARMTD ENSBTAP00000044166/1-614 RFTKR----- -VYVSLPNEE TRLLLLKNLL CKQGSPLTQK ELAQLARMTN 551 600 bmy_05229T0/1-454 GYSGSDLTAL AKDAALGPIR ELKPEQVKNM SASEMRNIRL SDFTESLKKI ENSTTRP00000000502/1-609 GYSGSDLTAL AKDAALGPIR ELKPEQVKNM SASEMRNIRL SDFTESLKKI ENSP00000320885/1-616 GYSGSDLTAL AKDAALGPIR ELKPEQVKNM SASEMRNIRL SDFTESLKKI ENSBTAP00000044166/1-614 GYSGSDLTAL AKDAALGPIR ELKPEQVKNM SASEMRNIRL SDFTESLKKI 601 650 bmy_05229T0/1-454 KRSVSPQTLE AYIRWNKDFG DTTV ENSTTRP00000000502/1-609 KRSVSPQTLE AYIRWNKDFG DTTV ENSP00000320885/1-616 KRSVSPQTLE AYIRWNKDFG DTTV ENSBTAP00000044166/1-614 KRSVSPQTLE AYIRWNKDFG DTTV