KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:49 2014 Check: 00 .. Name: bmy_04257T0/1-161 Len: 161 Check: 9093 Weight: 1.00 Name: ENSP00000405635/1-142 Len: 161 Check: 6246 Weight: 1.00 Name: ENSBTAP00000044208/1-125 Len: 161 Check: 8381 Weight: 1.00 Name: BACU020072/1-39 Len: 161 Check: 2280 Weight: 1.00 Name: ENSTTRP00000012687/1-47 Len: 161 Check: 9246 Weight: 1.00 // 1 50 bmy_04257T0/1-161 MKYKRWKSES GNCVQIDFED FGVSFWHRLR LLLIFHIPFY DASKNLKAFE ENSP00000405635/1-142 ---------- MNSLEQA--- ------EAPR VVSLIPAVVS GNCQDLKAFE ENSBTAP00000044208/1-125 ---------- MNSLEQA--- ---------- ---------- ---EDLKAFE BACU020072/1-39 ---------- MNSLEQA--- ---------- ---------- ---EDLKAFE ENSTTRP00000012687/1-47 ---------- MNSLEQA--- ---------- ---------- ---EDLKAFE 51 100 bmy_04257T0/1-161 RRLTEYIHCL QPATGRWRML LIVVSVCTAT GAWNWLIDPE TQKVSFFTSL ENSP00000405635/1-142 RRLTEYIHCL QPATGRWRML LIVVSVCTAT GAWNWLIDPE TQKVSFFTSL ENSBTAP00000044208/1-125 RRLTEYIHCL QPATGRWRML LIVVSVCTAT GAWNWLIDPE TQKVSFFTSL BACU020072/1-39 RRLTEYIHCL QPATGRWRSK CL-------- ---------- ---------- ENSTTRP00000012687/1-47 RRLTEYIHCL QPATGRWRSV LL-------- ---------- ---------- 101 150 bmy_04257T0/1-161 WNHPFFTISC ITLIGLFFAG IHKRVVAPSI IAARCRTVLA EYNMSCDDTG ENSP00000405635/1-142 WNHPFFTISC ITLIGLFFAG IHKRVVAPSI IAARCRTVLA EYNMSCDDTG ENSBTAP00000044208/1-125 WNHPFFTISC ITLIGLFFAG IHKRVVAPSI IAARCRTVLA EYNMSCDDTG BACU020072/1-39 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012687/1-47 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_04257T0/1-161 KLILKPRPHV Q ENSP00000405635/1-142 KLILKPRPHV Q ENSBTAP00000044208/1-125 KLILKPRPHV Q BACU020072/1-39 DVF------- - ENSTTRP00000012687/1-47 HIIMEPSIFH H