KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:49 2014 Check: 00 .. Name: BACU018382/1-232 Len: 314 Check: 423 Weight: 1.00 Name: bmy_04750T0/1-222 Len: 314 Check: 2107 Weight: 1.00 Name: ENSP00000355308/1-288 Len: 314 Check: 5126 Weight: 1.00 Name: ENSTTRP00000000411/1-202 Len: 314 Check: 5831 Weight: 1.00 Name: ENSBTAP00000044220/1-288 Len: 314 Check: 5581 Weight: 1.00 // 1 50 BACU018382/1-232 ---------- ---------- ---------- ---------- -----GGTNG bmy_04750T0/1-222 MGRLTEAAAA GGGASAARSA GPPPAPLPLS STSPGCAATM ASSEEDGTNG ENSP00000355308/1-288 MGRLTEAAAA GSGSRAAGWA GSPPTLLPLS PTSPRCAATM ASSDEDGTNG ENSTTRP00000000411/1-202 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044220/1-288 MGRLTEAAAA GGGASAARSA GPPPAPLSLS STSPGCAAAM ASSEEDGTNG 51 100 BACU018382/1-232 GASEAGEKRE AVGKRRRLGL LATAWLTFYN ITMTAGWLVL PIS----YME bmy_04750T0/1-222 GASEPGEERE AAGKRRHRGL LATSWLTFYN IAXXXXWLVL AIAMVRFYME ENSP00000355308/1-288 GASEAGEDRE APGERRRLGV LATAWLTFYD IAMTAGWLVL AIAMVRFYME ENSTTRP00000000411/1-202 ---------- ---------- ---------- ------WLVL AIAMVRFYME ENSBTAP00000044220/1-288 GASEASEERE AVGKRRRLGL LATIWLTFYN IAMTAGWLVL AIAMVRFYME 101 150 BACU018382/1-232 KGTHKGLYGS IQKTLKFFQT FVLLEIVHCL IGIVPTSVLV AGVQGSSRIF bmy_04750T0/1-222 KGTHKGLYKS IQKTLKVFQT FALLEVVHCL IGIVPTSVLV AGVQVSSRIF ENSP00000355308/1-288 KGTHRGLYKS IQKTLKFFQT FALLEIVHCL IGIVPTSVIV TGVQVSSRIF ENSTTRP00000000411/1-202 KGTHKGLYRS IQKTLKFFQT FALLEIVHCL IGIVPTSVLV AGVQVSSRIF ENSBTAP00000044220/1-288 KGTHKGLYRS IQKTLKFFQT FALLEIVHCL IGIVPTSVLV AGVQVSSRIF 151 200 BACU018382/1-232 MVYFCTYVF- ---------- ---------F INLFIYLFLA VLGLRFCVRA bmy_04750T0/1-222 MVWLVTHSIK PEAEPLAKER LGLDIQNEES VVLFLVVWTV MEITRYSFYT ENSP00000355308/1-288 MVWLITHSIK P--------- ----IQNEES VVLFLVAWTV TEITRYSFYT ENSTTRP00000000411/1-202 MVWLVTHSIK P--------- ----IQNEES VVLFLVAWTV TEITRYSFYT ENSBTAP00000044220/1-288 MVWLVTHSIK P--------- ----IQNEES VVLFLVAWTV TEITRYSFYT 201 250 BACU018382/1-232 FSSCGERGPL FIA-VRGPLT IVAFLVAEPG SIYPVGVAGE LDTRHTIYAA bmy_04750T0/1-222 FSLLDHL-PY FIKWARWR-- ---------- ---------- ---------- ENSP00000355308/1-288 FSLLDHL-PY FIKWARYNFF II-------- -LYPVGVAGE L---LTIYAA ENSTTRP00000000411/1-202 FSLLDHL-PY FVKWARYNFF II-------- -LYPVGVAGE L---LTIYAA ENSBTAP00000044220/1-288 FSLLDHL-PY FIKWARYNFF II-------- -LYPVGVAGE L---LTIYAA 251 300 BACU018382/1-232 LPHVKKTGMF SIRLPNKYNV SFDYYHFLLI T--SCIPLFP QLYFHTLRQR bmy_04750T0/1-222 ---------- ---------- ---------- ---RCLAV-- ---------- ENSP00000355308/1-288 LPHVKKTGMF SIRLPNKYNV SFDYYYFLLI TMASYIPLFP QLYFHMLRQR ENSTTRP00000000411/1-202 LPYVKKTGMF SIRLPNKYNV SFDYYYFLLI TMASYIPLFP QLYFHMLRQR ENSBTAP00000044220/1-288 LPYVKKTGMF SIRLPNKYNV SFDYYYFLLI TMASYIPLFP QLYFHMLRQR 301 350 BACU018382/1-232 RQVL------ ---- bmy_04750T0/1-222 ---------- ---- ENSP00000355308/1-288 RKVLHGEVIV EKDD ENSTTRP00000000411/1-202 RKVLHGEVIV EKDD ENSBTAP00000044220/1-288 RKVLHGEVIV EKDD