KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:55:50 2014  Check: 00 ..

 Name: ENSP00000404700/1-172     Len:    175  Check:  5627  Weight:  1.00
 Name: ENSBTAP00000044223/1-175  Len:    175  Check:  3981  Weight:  1.00
 Name: ENSTTRP00000003478/1-169  Len:    175  Check:  6793  Weight:  1.00
 Name: bmy_02414T0/1-153         Len:    175  Check:  3622  Weight:  1.00
 Name: BACU017073/1-170          Len:    175  Check:  4626  Weight:  1.00

//


                          1                                                   50
ENSP00000404700/1-172     MKIW---SSE HVFGHPWDTV IQAAMRKYPN PMNPSVLGVD VLQRRVDGRG 
ENSBTAP00000044223/1-175  CSLWSSIVSV CVLSHPWDTV IKAAMRKYPN PMNPCVVGVD VLERSVDGRG 
ENSTTRP00000003478/1-169  MRVW---SSE HVFGHPWDTV IKAAMRKYPN PMNPSVVGVD VLERSVDSRG 
bmy_02414T0/1-153         --ML---VVA FSSSHPWDTV IKAAMRKYPN PMNPSVVGVD VLERSVDSRG 
BACU017073/1-170          --ML---VVA FSSSHPWDTV IKAAMRKYPN PMNPSVVGVD VLERSVDSRG 


                          51                                                 100
ENSP00000404700/1-172     RLHSLRLLST EWGLPSLVRA ILGTSRTLTY IREHSVVDPV EKKMELCSTN 
ENSBTAP00000044223/1-175  RLHSHRLLST EWGLPSLVRA ILGTSRTLTY IREHSVVDPV EKKMELCSTN 
ENSTTRP00000003478/1-169  RLHSHRLLST EWGLPSLVRA ILGTSRTLTY IREHSVVDPV GKKMELCSTN 
bmy_02414T0/1-153         RLHSHRLLST EWGLPGLVRA ILGTSRTLTY XREHSIVDPV GKKMELCSTN 
BACU017073/1-170          RLHSHRLLST EWGLPGLVRA ILGTSRTLTY IREHSIVDPV GKKMELCSTN 


                          101                                                150
ENSP00000404700/1-172     ITLTNLVSVN ERLVYTPHPE NPEMTVLTQE AIITVKGISL GSYLESLMAN 
ENSBTAP00000044223/1-175  ITLTNLVSVS ERLVYTPHPE DPGKTVLTQE AVITVKGVSL GSYLESLMAN 
ENSTTRP00000003478/1-169  ITLTNWV-VS ESLVYPPLE- -PVVTVLTQE AVITVKGISL GSYLESLMAN 
bmy_02414T0/1-153         ITLTNWVSVS ERLVYTPHPE DPGRTVLTQE AVITVKGISL GSYLESLMAN 
BACU017073/1-170          ITLTNWVSVS ERLVYTPHPE DPGRTVLTQE AVITVKGISL GSYLESLMAN 


                          151                                                200
ENSP00000404700/1-172     TISSNAKKGW AAIEWIIEHS ESAVS 
ENSBTAP00000044223/1-175  TISSNAKKGW AAIEWIIENA ERALS 
ENSTTRP00000003478/1-169  TISSNAKKGW AAIEWIIENA ERALS 
bmy_02414T0/1-153         TISSNAKK-- ---------- ----- 
BACU017073/1-170          TISSNAKKGW AAIEWIIENA ERALS