KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:50 2014 Check: 00 .. Name: bmy_21529T0/1-351 Len: 718 Check: 467 Weight: 1.00 Name: ENSP00000265107/1-654 Len: 718 Check: 6913 Weight: 1.00 Name: ENSBTAP00000044228/1-652 Len: 718 Check: 1103 Weight: 1.00 Name: BACU015010/1-654 Len: 718 Check: 8298 Weight: 1.00 Name: ENSTTRP00000001089/1-655 Len: 718 Check: 8303 Weight: 1.00 // 1 50 bmy_21529T0/1-351 MEK------- ---------- ---------- ---------- ---------- ENSP00000265107/1-654 MERSGPSEVT GSDASGPDPQ LAVTMGFTGF GKKARTFDLE AMFEQTRRTA ENSBTAP00000044228/1-652 MERPGPSD-- GSDASGPDPQ LAVTMGFTGF GKKARTFDLE AMFEQTRRTA BACU015010/1-654 MERPGPSGVT GSDASGPDPQ LAVTMGFTGF GKKARTFDLE AMFEQTRRTA ENSTTRP00000001089/1-655 MERPGPSGVT GSDASGPDPQ LAVTMGFTGF GKKARTFDLE AMFEQTRRTA 51 100 bmy_21529T0/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000265107/1-654 VERSRKTLEA REKEEEMNRE KELRRQNEDI EPTSSRSNVV RDCSKSSSRD ENSBTAP00000044228/1-652 VERSRKTLEA REREEEMNRE KELRRQNEDL EPTSSGSNVA RACSKSSSRD BACU015010/1-654 VERSRKTLEA REKEEEMNRE KELRRQSEDL EPTSSSSNVA RDCSKSSSRD ENSTTRP00000001089/1-655 VERSRKTLEA REKEEEMNRE KELRRQSEDL EPTSSGSNVA RDCSKSSSRD 101 150 bmy_21529T0/1-351 ---------- ---------- ---------- ----QSKILT PVTPSLRVKM ENSP00000265107/1-654 TSSSESEQSS DSSDDELIGP PLPPKMVGKP VNFMEEDILG PLPPPLNEEE ENSBTAP00000044228/1-652 TSSSESDESS DSSDDELIGP PLPLKMVEEP VNPMEEGVLG PLPPPLAEDV BACU015010/1-654 TSSSESETSS ESSDDELIGP PLPLKMPEEP VNHVEEDILG PLPPPLGEDV ENSTTRP00000001089/1-655 TSSSESEASS ESSDDELIGP PLPLKMAEEP VNHMEEDILG PLPPPLGEDV 151 200 bmy_21529T0/1-351 EE-------- ---------- ---------- ---------- ---------- ENSP00000265107/1-654 EEAE-EEEEE EEEEENPVHK IPDSHEITLK HGTKTVSALG LDPSGARLVT ENSBTAP00000044228/1-652 EEED-DDDGD SEEEENPVRK IPDSHEITLK HGTKTVSALG LDPSGARLVT BACU015010/1-654 EDDD-DDDDD SEEEENPVQK IPDSHEITLK HGTKTVSALG LDPSGARLVT ENSTTRP00000001089/1-655 EEDDDDDDDD SEEEENPVQK IPDSHEITLK HGTKTVSALG LDPSGARLVT 201 250 bmy_21529T0/1-351 ---------- ---------- ---------- ---KRLAF-- ---------- ENSP00000265107/1-654 GGYDYDVKFW DFAGMDASFK AFRSLQPCEC HQIKSLQYSN TGDMILVVSG ENSBTAP00000044228/1-652 GGYDYDVKFW DFAGMDASFK AFRSLQPCEC HQIKSLQYSN TGDMILVVSG BACU015010/1-654 GGYDYDVKFW DFAGMDASFK AFRSLQPCEC HQIKSLQYSN TGDMILVVSG ENSTTRP00000001089/1-655 GGYDYDVKFW DFAGMDASFK AFRSLQPCEC HQIKSLQYSN TGDMILVVSG 251 300 bmy_21529T0/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000265107/1-654 SSQAKVIDRD GFEVMECIKG DQYIVDMANT KGHTAMLHTG SWHPKIKGEF ENSBTAP00000044228/1-652 SSQAKVIDRD GFEVMECIKG DQYIVDMANT KGHTAMLHTG SWHPKIKGEF BACU015010/1-654 SSQAKVIDRD GFEVMECIKG DQYIVDMANT KGHTAMLHTG SWHPKIKGEF ENSTTRP00000001089/1-655 SSQAKVIDRD GFEVMECIKG DQYIVDMANT KGHTAMLHTG SWHPKIKGEF 301 350 bmy_21529T0/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000265107/1-654 MTCSNDATVR TWEVENPKKQ KSVFKPRTMQ GKKVIPTTCT YSRDGNLIAA ENSBTAP00000044228/1-652 MTCSNDATVR TWEVENPKKQ KSVFKPRTMQ GKKVIPTTCT YSRDGSLIAA BACU015010/1-654 VTCSNDATVR TWEVENPKKQ KSVFKPRTMQ GKKVIPTTCT YSRDGNLIAA ENSTTRP00000001089/1-655 MTCSNDATVR TWEVENPKKQ KSVFKPRTMQ GKKVIPTTCT YSRDGNLIAA 351 400 bmy_21529T0/1-351 ---------- -----VHPKF HYKQAHDPGT DTSCVTFSYD GNVLASRGGD ENSP00000265107/1-654 ACQNGSIQIW DRNLTVHPKF HYKQAHDSGT DTSCVTFSYD GNVLASRGGD ENSBTAP00000044228/1-652 ACQNGSIQIW DRNLTVHPKF HYKQAHDPGT DTSCVTFSYD GTVLASRGGD BACU015010/1-654 ACQNGSIQIW DRNLTVHPKF HYKQAHDPGT DTSCVTFSYD GNVLASRGGD ENSTTRP00000001089/1-655 ACQNGSIQIW DRNLTVHPKF HYKQAHDPGT DTSCVTFSYD GNVLASRGGD 401 450 bmy_21529T0/1-351 DTLKLWDIRQ FNKPLFSASG LPTMFPMTDC CFSPDDKLIV TGTSVQRGCG ENSP00000265107/1-654 DSLKLWDIRQ FNKPLFSASG LPTMFPMTDC CFSPDDKLIV TGTSIQRGCG ENSBTAP00000044228/1-652 DTLKLWDIRQ FNKPLFSASG LPTMFPMTDC CFSPDDKLIV TGTSVQRGCG BACU015010/1-654 DTLKLWDIRQ FNKPLFSASG LPTMFPMTDC CFSPDDKLIV TGTSVQRGCG ENSTTRP00000001089/1-655 DTLKLWDIRQ FNKPLFSASG LPTMFPMTDC CFSPDDKLIV TGTSVQRGCG 451 500 bmy_21529T0/1-351 SGKLVFFERR TFQRVYEIDI TDAQRNDIFR SRNPDSKPIM CSLPFICCVT ENSP00000265107/1-654 SGKLVFFERR TFQRVYEIDI TDA------- ---------- ---------- ENSBTAP00000044228/1-652 SGKLVFFERR TFQRVYEIDI TDA------- ---------- ---------- BACU015010/1-654 SGKLVFFERR TFQRVYEIDI TDA------- ---------- ---------- ENSTTRP00000001089/1-655 SGKLVFFERR TFQRVYEIDI TDA------- ---------- ---------- 501 550 bmy_21529T0/1-351 QQMCTSGCGK PPAIEVPLQE QRMEDVFVDY HAFPLQSVVR CLWHPKLNQI ENSP00000265107/1-654 ---------- ---------- ---------- ------SVVR CLWHPKLNQI ENSBTAP00000044228/1-652 ---------- ---------- ---------- ------SVVR CLWHPKLNQI BACU015010/1-654 ---------- ---------- ---------- ------SVVR CLWHPKLNQI ENSTTRP00000001089/1-655 ---------- ---------- ---------- ------SVVR CLWHPKLNQI 551 600 bmy_21529T0/1-351 MVGTGNGLAK VYYDPNKSQR GAKLCVVKTQ RKAKQAETLT QDYIITPHAL ENSP00000265107/1-654 MVGTGNGLAK VYYDPNKSQR GAKLCVVKTQ RKAKQAETLT QDYIITPHAL ENSBTAP00000044228/1-652 MVGTGNGLAK VYYDPNKSQR GAKLCVVKTQ RKAKQAETLT QDYIITPHAL BACU015010/1-654 MVGTGNGLAK VYYDPNKSQR GAKLCVVKTQ RKAKQAETLT QDYIITPHAL ENSTTRP00000001089/1-655 MVGTGNGLAK VYYDPNKSQR GAKLCVVKTQ RKAKQAETLT QDYIITPHAL 601 650 bmy_21529T0/1-351 PMFREPRQRS TRKQLEKDRL DPLKSHKPEP PVAGPGRGGR VGTHGGTLSS ENSP00000265107/1-654 PMFREPRQRS TRKQLEKDRL DPLKSHKPEP PVAGPGRGGR VGTHGGTLSS ENSBTAP00000044228/1-652 PMFREPRQRS TRKQLEKDRL DPLKSHKPEP PVAGPGRGGR VGTHGGTLSS BACU015010/1-654 PMFREPRQRS TRKQLEKDRL DPLKSHKPEP PVAGPGRGGR VGTHGGTLSS ENSTTRP00000001089/1-655 PMFREPRQRS TRKQLEKDRL DPLKSHKPEP PVAGPGRGGR VGTHGGTLSS 651 700 bmy_21529T0/1-351 YIVKNIALDK TDDSNPREAI LRHAKAAEDN PYWVSPAYSK ---------- ENSP00000265107/1-654 YIVKNIALDK TDDSNPREAI LRHAKAAEDS PYWVSPAYSK TQPKTMFAQV ENSBTAP00000044228/1-652 YIVKNIALDK TDDSNPREAI LRHAKAAEDN PYWVSPAYSK TQPKTMFAQV BACU015010/1-654 YIVKNIALDK TDDSNPREAI LRHAKAAEDN PYWVSPAYSK TQPKTMFAQV ENSTTRP00000001089/1-655 YIVKNIALDK TDDSNPREAI LRHAKAAEDN PYWVSPAYSK TQPKTMFAQV 701 750 bmy_21529T0/1-351 ---------- -------- ENSP00000265107/1-654 ESDDEEAKNE PEWKKRKI ENSBTAP00000044228/1-652 ESDDEETKNE PEWKKRKI BACU015010/1-654 ESDDEEAKNE PEWKKRKI ENSTTRP00000001089/1-655 ESDDEEAKNE PEWKKRKI