KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:51 2014 Check: 00 .. Name: ENSP00000267012/1-565 Len: 579 Check: 6968 Weight: 1.00 Name: ENSBTAP00000044263/1-519 Len: 579 Check: 3059 Weight: 1.00 Name: ENSTTRP00000013132/1-558 Len: 579 Check: 9002 Weight: 1.00 Name: bmy_07758T0/1-497 Len: 579 Check: 2149 Weight: 1.00 Name: BACU018306/1-513 Len: 579 Check: 3418 Weight: 1.00 // 1 50 ENSP00000267012/1-565 MAEGKAGGAA GLFAKQVQKK FSRAQEKVLQ KLGKAVETKD ERFEQSASNF ENSBTAP00000044263/1-519 MAEGRAGGAA GLFAKQVQKK FSRAQEKVLQ KLGKTVETKD ERFEQSASNF ENSTTRP00000013132/1-558 MAEGRASGAA GLFAKQVQKK FSRAQEKXXX XXXXXXXXXX XXXXXXXXXX bmy_07758T0/1-497 ---------- ---------- ---------- ---------- KYISLVIKGI BACU018306/1-513 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000267012/1-565 YQQQAEGHKL YKDLKNFLSA VKVMHESSKR VSETLQEIYS SEWDGHEELK ENSBTAP00000044263/1-519 HQQQAEGHKL YKDLKNFLSA VKVMHESSKR VSETLQEIYS SKWDGHEELK ENSTTRP00000013132/1-558 XXXXAEGHKL YKDLKNFLSA VKVMHESSKR VSETLQEIYS SKWDGHEELK bmy_07758T0/1-497 SPFQAEGHKL YKDLKNFLSA VKVMHESSKR VSETLQEIYS SKWDGHEELK BACU018306/1-513 ----AEGHKL YKDLKNFLSA VKVMHESSKR VSETLQDIYS SKWDGHEELK 101 150 ENSP00000267012/1-565 AIVWNNDLLW EDYEEKLADQ AVRTMEIYVA QFSEIKERIA KRGRKLVDYD ENSBTAP00000044263/1-519 AIVANNDLLW EDYEEKLADQ VLRTMENYVA QFSEIKERIA KRGRKLVDYD ENSTTRP00000013132/1-558 AIVANNDLLW EDYEEKLADQ ALRTMENYVA QFSEIKERIA KRGRKLVDYD bmy_07758T0/1-497 AIVANNDLLW EDYEEKLADQ ALRTMENYVA QFSEIKERIA KRGRKLVDYD BACU018306/1-513 AIVANNDLLW EDYEEKLADQ ALRTMENYVA QFSEIKERIA KRGRKLVDYD 151 200 ENSP00000267012/1-565 SARHHLEAVQ NAKKKDEAKT AKAEEEFNKA QTVFEDLNQE LLEELPILYN ENSBTAP00000044263/1-519 SARHHLEAVQ NAKKKDEAKT AKAEEEFNKA QLVFEDLNQE LLEELPVLYN ENSTTRP00000013132/1-558 SARHHLEAVQ NAKKKDEAKT AKAEEEFNKA QVVFEDLNQE LLEELPVLYN bmy_07758T0/1-497 SARHHLEAVQ SAKKKDEAKT AKAEEEFNKA QVVFEDLNQE LLEELPVLYN BACU018306/1-513 SARHHLEAVQ SAKKKDETKT AKAEEEFNKA QVVFEDLNQE LLEELPVLYN 201 250 ENSP00000267012/1-565 SRIGCYVTIF QNISNLRDVF YREMSKLNHN LYEVMSKLEK QHSNKVFVVK ENSBTAP00000044263/1-519 SRIGCYVTIF QNISNLRDVF YREMSKLNHN LYEVMSKLEK QHSDKVFVVK ENSTTRP00000013132/1-558 SRIGCYVTIF QNISNLRDVF YREMSKXXXX XXXXXXKLEK QH-DKVFVVK bmy_07758T0/1-497 SRIGCYVTIF QNISNLRDVF YREMSKLNHN LYEVMSKLEK QHSDKVFVVK BACU018306/1-513 SRIGCYVTIF QNISNLRDVF YREMSKLNHN LYEVMSKLEK QHSDKVFVVK 251 300 ENSP00000267012/1-565 GLSSSSRRSL VISPPVRTAT VSSPLTSPTS PSTLSLKSES ESVSAT-EDL ENSBTAP00000044263/1-519 GLSSSNRRSL VISPPVRTSM VSSPITSPTS PSALSLKSEK DSSSASEEEL ENSTTRP00000013132/1-558 GLSSSSRRSL VISPPVRTST VSSPLTSPTS PSALSLKSEK DSTSASEEEL bmy_07758T0/1-497 GLSSSNRRSL VISPPVRTST VSSPLTSPTS PSALSLKSEK DSTSASEEEL BACU018306/1-513 GLSSSSRRSL VISPPVRTST VSSPLTSPTS PSALSLKSEK DSTSASEEEL 301 350 ENSP00000267012/1-565 APDAAQGEDN SEIK-ELLEE EEIEKEGSEA SSSEEDEPLP ACNGPAQAQP ENSBTAP00000044263/1-519 ASDSAQGEDN SEIKEEPLKD KETEEE-AET SSSEEEEPLP ACNGPIQSQP ENSTTRP00000013132/1-558 ASDPAQGEDN SEIKKEPLTD KEIEEE-AEA SSSKEEEPLL AFNGPSQPQP bmy_07758T0/1-497 ASDPAQGEDN SEIKKEPLKD KEIEEE-AEA SSSEEEEPLL AFNGPSQAQP BACU018306/1-513 ASDPAQGEDN SEIKKEPLKD KEIEEE-AEA SSSEEEEPLP AFNGPSQAQP 351 400 ENSP00000267012/1-565 SPTTERAKSQ EEVLPSSTTP SPGGALSPSG QPSSSATEVV LRTRTASEGS ENSBTAP00000044263/1-519 SPLTEDRESQ EEVFPCSPAP SPARALTPSE QASSSS-VVV LRTRTSSEGS ENSTTRP00000013132/1-558 SPTAEGGESQ EEILPCSPAP SPGRALIPSE QAAPFP-EVV LRTRTSSEGS bmy_07758T0/1-497 SPSVEGGESQ EQVLPCSPAP SPGRALIPSE QASSSP-EVV LRTRTSSEGS BACU018306/1-513 SPTVEGGESQ EEVLPCSPAP SPGRALIPSE QASSLP-EVV LRTRTSSEGS 401 450 ENSP00000267012/1-565 EQPKKRASIQ RTSAPPSRPP PPRATASP-- RPSSGNIPSS PTASGGGSPT ENSBTAP00000044263/1-519 EELKKKVSVQ RASAPPSRPP PPRATPSP-- RGSLGNTPSS PPA----SPT ENSTTRP00000013132/1-558 EQP-KRASVQ RASAPPGRPP PPTATPSP-- RSSLGNMPSS PPASEPSSPT bmy_07758T0/1-497 EQP-ERASMQ RASA-PDRPP PPRATPSP-- RSSLGNMPSS PTASERSSPT BACU018306/1-513 EQP-KRASMQ RASA-PDRPP PPRATPSPSS RASLGNMPSS PPASERSSPT 451 500 ENSP00000267012/1-565 SPRASLGTGT ASPRTSLEVS PNPEPPEKPV RTPEAKENEN IHNQNPEELC ENSBTAP00000044263/1-519 S--------- --PRASSEAS PDPQPPEKPV R-----EKEN TDNLNPEELC ENSTTRP00000013132/1-558 SPRASLGAET PSPRASFEAS PDPQPPEKPA RTPEVGEKEN TDNLNPEELR bmy_07758T0/1-497 SPRASLGAET PSPRASLEAS PDPQPPEKPA RTPEVGEKEN TDNLNPEELC BACU018306/1-513 SPRASLGAET PSPRASLEAS PDPQPPEKPA RTPEVREKEN TDNLNPEELC 501 550 ENSP00000267012/1-565 TSPTLMTSQ- VASEPGEAKK MEDKEKDNKL ISANSSE--- -----GQD-Q ENSBTAP00000044263/1-519 TSPTLMNSQ- ---------- ---------- ---------- -----NQSLQ ENSTTRP00000013132/1-558 TAPALMICQ- --SCKARKVE D----KDNRL ISVDSPE--- -----NQGLQ bmy_07758T0/1-497 TAPTLMISQ- ---------- ---------- ---------- -----NQGLQ BACU018306/1-513 TAPTLMISQR EQGCDAWQGK EGRRQEDNRL ISVDSPEILK SESSANQGLQ 551 600 ENSP00000267012/1-565 LQVSMVPENN NLTAPEPQEE VSTSENPQL ENSBTAP00000044263/1-519 LHGSAVPEES NVIAPEPEEE VSTIQSAQL ENSTTRP00000013132/1-558 LHVSAVPEES SVIAPEPQEE VSTIQNAQL bmy_07758T0/1-497 LHVSAVPEES SVIAPEPQEE VSTIQNAQL BACU018306/1-513 LHVSAVPEES SVIAPEPQEE V--------