KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:52 2014 Check: 00 .. Name: ENSP00000378409/1-311 Len: 324 Check: 9243 Weight: 1.00 Name: ENSBTAP00000044266/1-311 Len: 324 Check: 1863 Weight: 1.00 Name: ENSTTRP00000010631/1-310 Len: 324 Check: 9993 Weight: 1.00 Name: bmy_18778T0/1-323 Len: 324 Check: 346 Weight: 1.00 Name: BACU019806/1-311 Len: 324 Check: 2192 Weight: 1.00 // 1 50 ENSP00000378409/1-311 MGVPTALEAG SWRWGSLLFA LFLAASL-GP VAAFKVATPY SLYVCPEGQN ENSBTAP00000044266/1-311 MGFPPVPEAG SRRWRPVLLA FFLAASR-DL VTAFKIATPY SLYVCPEGQN ENSTTRP00000010631/1-310 MGVPPVPEAG SWRRGPVLLA FFLAASR-GL VAAFKVATPY SLYVCPEGQN bmy_18778T0/1-323 MGVPPVPEAG SWRWGPVLLA FFLAASRAGL VAAFKVATPY SLYVCPEGQN BACU019806/1-311 MGAPPVPEAG SWRWGPVLLA FFLAASR-GL VAAFKVATPY SLYVCPEGQN 51 100 ENSP00000378409/1-311 VTLTCRLLGP VDKGHDVTFY KTWYRSSRGE VQTCSERRPI RNLTFQDLHL ENSBTAP00000044266/1-311 VTLTCRLLGP LAKGHDVTFY KTWYRSSRGE VQVCSERRPI RNLTFQDLHL ENSTTRP00000010631/1-310 VTLTCRLLGP LAKGHDVTFY KTWYRSSRGE VQACSERRPI RNLTFQDLHL bmy_18778T0/1-323 VTLTCRLLGP LAKGHDVTFY KTWYRSSRGE VQACSERRPI RNLTFQDLHL BACU019806/1-311 VTLTCRLLGP LAKGHDVTFY KTWYRSSRGE VQACSERRPI RNLTFQDLHL 101 150 ENSP00000378409/1-311 HHGGHQAANT SHDLAQRHGL ESASDHHGNF SITMRNLTLL DSGLYCCLVV ENSBTAP00000044266/1-311 HHSSHQ-ANT SQDLAQRYGL ESASDHHGNF TITMRNLTLL DGGLYCCLVV ENSTTRP00000010631/1-310 HHGGHQ-ANS SQDLAQRHGL ESASDHHGNF TITMRNLTLL DGGLYCCLVV bmy_18778T0/1-323 HHSGHQ-ANT SQDLAQRHGL ESASDHHGNF TITMRNLTLL DGGLYCCLVV BACU019806/1-311 HHSGHQ-ANT SQDLAQRHGL ESASDHHGNF TITMRNLTLL DGGLYCCLVV 151 200 ENSP00000378409/1-311 EIRHHHSEHR VHGAMELQVQ ---------- -TGKDAPSNC VVYPSSSQDS ENSBTAP00000044266/1-311 EIRHHHSEQR LFGAMELQVQ ---------- -RGKETLSKC IAYPPSSNES ENSTTRP00000010631/1-310 EIRHRHSEQR LYGAMELQVQ ---------- -RGEEAPSKC TVYPPSSKES bmy_18778T0/1-323 EIRHHHSEQR LYGAMELQVQ RGEKARGGRL DRGEEAPSKC IVHPPSSKES BACU019806/1-311 EIRHHHSEQR LYGAMELQVQ ---------- -RGEEAPSKC IVHPPSSKES 201 250 ENSP00000378409/1-311 ENITAAALAT GACIVGILCL PLILLLVYKQ RQAASNRRAQ ELVRMDS-NI ENSBTAP00000044266/1-311 ESITAAALAT SACIVGILCL PLILLLVYKQ RQVASNRRAQ ELVRMDSNNI ENSTTRP00000010631/1-310 ESITAAALAT SACIVGILCL PLILLLVYKQ RQVASNRRAQ ELVRMDS-NT bmy_18778T0/1-323 ESITAAALAT SACIVGILCL PLILLLVYKQ RQVASNRRAQ ELVRMDSNNT BACU019806/1-311 ESITAAALAT SACIVGILCL PLILLLVYKQ RQVASNRRAQ ELVRMDSNNT 251 300 ENSP00000378409/1-311 QGIENPGFEA SPPAQGIPEA KVRHPLSYVA QRQPSESGRH LLSEPSTPLS ENSBTAP00000044266/1-311 QGIENPGFET SPPSHGMLEA KPRQALSYMA QRQPSESGRH LLSEPNTPLS ENSTTRP00000010631/1-310 QGIENPGFET SPPSHGMPET KPRQPLTYMA RRQPSESGRH LLSEPNTPLS bmy_18778T0/1-323 QGIENPGFEI SPPSHGMPET KPRQPLTYVA QRQPSESGRH LLSEPNTPLS BACU019806/1-311 QGIENPGFEI SPPSHGMPET KPRQPLTYVA RRQPSESGRH LLSEPNTPLS 301 350 ENSP00000378409/1-311 PPGPGDVFFP SLDPVPDSPN FEVI ENSBTAP00000044266/1-311 PPGPGEVFFP SLDPVPDSPN SEAV ENSTTRP00000010631/1-310 PPGPGDVFFP SLDPVPDSPN SEAI bmy_18778T0/1-323 PPGPGDVFFP SLDPVPDSPN SEAI BACU019806/1-311 PPGPGDVFFP SLDPVPDSPN SEAI