KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:53 2014 Check: 00 .. Name: ENSBTAP00000044292/1-334 Len: 334 Check: 2307 Weight: 1.00 Name: ENSTTRP00000005060/1-316 Len: 334 Check: 6475 Weight: 1.00 Name: bmy_02792T0/1-316 Len: 334 Check: 6696 Weight: 1.00 Name: BACU009155/1-316 Len: 334 Check: 7211 Weight: 1.00 // 1 50 ENSBTAP00000044292/1-334 MSAELETSEG LDEPEKKISG VPEKENHTRM ADLSELLKEG TKESHDRAEN ENSTTRP00000005060/1-316 MSAELETSEG VDEPEKKSSG APEKENHTRM ADLSELLKEG TKEAHDRAEN bmy_02792T0/1-316 MSAELETSEG VDEPEKKSSG APEKENHTRM ADLSELLKEG TKEAHDRAEN BACU009155/1-316 MSAELETSEG VDEPEKKSSG APEKENHTRM VDLSELLKEG TKEAHDRAEN 51 100 ENSBTAP00000044292/1-334 TQFVKDFLKG NIRKELFKLA TTALYFTYSA LEEEIDRNKD HPAFAPLYFP ENSTTRP00000005060/1-316 TQFVKDFLKG NIRKELFKLA TTALYFTYSA LEEEMDRNKD HPAFAPLYFP bmy_02792T0/1-316 TQFVKDFLKG NIRKELFKLA TTALYFTYSA LEEEMDRNKD HPAFAPLYFP BACU009155/1-316 TQFVKDFLKG NIRKELFKLA TTALYFTYSA LEEEMDRNKD HPAFAPLYFP 101 150 ENSBTAP00000044292/1-334 TELHRKKALI RDMEYLYGEH WEEQAQCSEA TRKYVERIHE VGQNEPELLV ENSTTRP00000005060/1-316 SELHRKAALI KDMEYFYGED WEEQVQCSEA TRKYVERIHC VGQNEPELLV bmy_02792T0/1-316 TELHRKAALI KDMEYFYGED WVEQAQCSEA TRKYVERIHY VGQDEPELLV BACU009155/1-316 TELHRKAALI KDMEYFYGED WEEQAQCSEA TRKYVERIHY VGQDEPELLV 151 200 ENSBTAP00000044292/1-334 AHAYTRYMGD LSGGQVLKKV AQRALKLPST GEGTQFYLFE NVDNAQQFKQ ENSTTRP00000005060/1-316 AHAYTRYMGD LSGGQVLKKV AQRALKLPST GEGTQFYLFE NVDNAQQFKQ bmy_02792T0/1-316 AHAYTRYMGD LSGGQVLKKV AQRALKLPST GEGTQFYLFE NVDNAQQFKQ BACU009155/1-316 AHAYTRYMGD LSGGQVLKKV AQRALKLPST GEGTQFYLFE NVDNAQQFKQ 201 250 ENSBTAP00000044292/1-334 LYRARMNALD LNLETKEKIV EEANKAFEFN MQVFNELDQA GSLLAKETLE ENSTTRP00000005060/1-316 FYRARMNALD LNLKTKEKIV EEANKAFEYN MQIFSELDQA GSLLAKETLE bmy_02792T0/1-316 FYRARMNALD LNLKTKEKIV EEANKAFEYN MQIFSELDQA GSLLAKETLE BACU009155/1-316 FYRARMNALD LNLKTKEKIV EEANKAFEYN MQIFSELDQA GSLLAKETLE 251 300 ENSBTAP00000044292/1-334 DGLPAHDGLP AHGRLPTQDG LPVHDGKGDL RKCPYYAAQL DKGALEGSSC ENSTTRP00000005060/1-316 ---------- --------DG LPVHDGKGDV RKCPYYAAKQ DKGALEGSSC bmy_02792T0/1-316 ---------- --------DG LPVHDGKGDV RKCPYYAAKQ DKGALEGSSC BACU009155/1-316 ---------- --------DG LPVHDGKGDV RKCPYYAAKQ DKGALEGSSC 301 350 ENSBTAP00000044292/1-334 PFGAALAVLR RPGLQFLLAA SVALAAGLLA WYSM ENSTTRP00000005060/1-316 PFRTVLAVLS KPSLQFILAA SVALAAGLLA WYYM bmy_02792T0/1-316 PFRTVLAVLS KPSLQFILAA SVALAAGLLA WYYM BACU009155/1-316 PFRTVLAVLS KPSLQFILAA SVALAAGLLA WYYM