KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:54 2014 Check: 00 .. Name: ENSP00000264027/1-299 Len: 299 Check: 1075 Weight: 1.00 Name: ENSBTAP00000044313/1-195 Len: 299 Check: 5065 Weight: 1.00 Name: bmy_07002T0/1-299 Len: 299 Check: 5361 Weight: 1.00 Name: ENSTTRP00000006533/1-299 Len: 299 Check: 3024 Weight: 1.00 // 1 50 ENSP00000264027/1-299 MDLVLRVADY YFFTPYVYPA TWPEDDIFRQ AISLLIVTNV GAYILYFFCA ENSBTAP00000044313/1-195 MDLVLSIADY YFFTPYIYPA TWPEDNIFRQ AITLLIVTNL GAFILYFFFA bmy_07002T0/1-299 MDLVLNAADY YFFTPYIYPA TWPEDSIFRQ AVSLLIITNL GAYILYFLFA ENSTTRP00000006533/1-299 MDLVLNAADY YFFTPYIYPA TWPEDSIFRQ AVSLLIITNL GAYILYFLFA 51 100 ENSP00000264027/1-299 TLSYYFVFDH ALMKHPQFLK NQVRREIKFT VQALPWISIL TVALFLLEIR ENSBTAP00000044313/1-195 TLSYYFVYDH LLMKHPQFLK NQVSREITHS VQSMPWMSIP TVLLFLLEVR bmy_07002T0/1-299 TLSYYFVYDH SLMKHPQFLK NQVYREIMHS VQSVPWISIP TVSVFLLEVR ENSTTRP00000006533/1-299 TLSYYFVYDH SLMKHPQFLK NQVYREIMHS VQSMPWISLP TVSVFLLEVR 101 150 ENSP00000264027/1-299 GYSKLHDDLG EFPYGLFELV VSIISFLFFT DMFIYWIHRG LHHRLVYKRL ENSBTAP00000044313/1-195 GYSRLYDGIG EFPYGWFQLV ASVLSFLFFT DMLIYWIHRG LHHKLVYKRL bmy_07002T0/1-299 GYSKLYDSIE EFPYGWFRLI ASVLSFLFFT DMLIYWIHRG LHHRLVYKRL ENSTTRP00000006533/1-299 GYSKLYDSIE EFPDGWLQFI ASVLSFLFFT DMLIYWIHRG LHHRLVYKHL 151 200 ENSP00000264027/1-299 HKPHHIWKIP TPFASHAFHP IDGFLQSLPY HIYPFIFPLH KVVYLSLYIL ENSBTAP00000044313/1-195 HKPHHIWKIP TPFASHAFHP LDGFLQSLPY HIYPFIFPLH K--------- bmy_07002T0/1-299 HKPHHIWKIP TPFASHAFHP LDGFLQGLPY HIYPFIFPLH KVVYLGLYVL ENSTTRP00000006533/1-299 HKPHHIWKIP TPFASHAFHP LDGFLQGLPY HIYPFIFPLH KVVYLGLYVL 201 250 ENSP00000264027/1-299 VNIWTISIHD GDFRVPQILQ PFINGSAHHT DHHMFFDYNY GQYFTLWDRI ENSBTAP00000044313/1-195 ---------- ---------- ---------- ---------- ----TSWA-- bmy_07002T0/1-299 VNIWTISIHD GDFRVPHIFR PFINGSAHHT DHHMLFDYNY GQYFTLWDRI ENSTTRP00000006533/1-299 VNIWTISIHD GDFRVPHIFR PFINGSAHHT DHHMLFDYNY GQYFTLWDRI 251 300 ENSP00000264027/1-299 GGSFKNPSSF EGKGPLSYVK EMTEGKRSSH SGNGCKNEKL FNGEFTKTE ENSBTAP00000044313/1-195 ---------- ---------- ---------- ---------- --------- bmy_07002T0/1-299 GGSFKNPSSF EGKGPLNYVK KMTEEKRNSH TVSGCNNEKL FNGEFTKAE ENSTTRP00000006533/1-299 GGSFKNPSSF EGNGPLNYVK KMTEENRNSH AVSGCKNEKL FNGEFKKTD