KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:55 2014 Check: 00 .. Name: ENSP00000339179/1-338 Len: 344 Check: 4016 Weight: 1.00 Name: ENSTTRP00000008179/1-334 Len: 344 Check: 2229 Weight: 1.00 Name: ENSBTAP00000044369/1-326 Len: 344 Check: 2494 Weight: 1.00 Name: bmy_16970T0/1-343 Len: 344 Check: 5438 Weight: 1.00 Name: BACU008674/1-327 Len: 344 Check: 6370 Weight: 1.00 // 1 50 ENSP00000339179/1-338 MGKGDVLEAA PTTTAYHSLM DEYGYEVGKA IGHGSYGSVY EAFYTKQKVM ENSTTRP00000008179/1-334 MGKGDTLG-A PATSAYRSVM EEYGYEVGKV IGHGSYGTVY EAYYTKQKVM ENSBTAP00000044369/1-326 MGKGD-ME-A PPTSAYRSVM EEYGYEVGKV IGNGSYGTVY EAYYTKQKVM bmy_16970T0/1-343 MGKGDTLE-A RSTSAYRSVM EEYGYEVGKV IGNGSYGTVY EAYYTKQKVM BACU008674/1-327 MGKGDTLE-A PSTSAYRSVM EEHGYEVGKV IGNGSYGTVY EAYYTKQKVM 51 100 ENSP00000339179/1-338 VAVKIISKKK ASDDYLNKFL PREIQVMKVL RHKYLINFYR AIESTSRVYI ENSTTRP00000008179/1-334 VAVKIISKKK ASEDYLNKFL PREIQVMKVL RHKYLINFYQ AIETTSRVYV ENSBTAP00000044369/1-326 VAVKIISKKK ASEDYLNKFL PREIQVMKVL RHKYLINFYQ AIETTSRVYI bmy_16970T0/1-343 VAVKIISKKK ASEDYLNKFL PREIQVMKVL RHKYLINFYQ AIETTSRVYI BACU008674/1-327 VAVKIISKKK ASEDYLNKFL PREIQVMKVL RHKYLINFYQ AIETTSRVYI 101 150 ENSP00000339179/1-338 ILELAQGGDV LEWIQRYGAC SEPLAGKWFS QLTLGIAYLH SKSIVHR--- ENSTTRP00000008179/1-334 ILELVQGGDV LEWIQHYGAC SEPLAGKWFS QMTLGIAYLH SKGIVH---- ENSBTAP00000044369/1-326 ILELAQGGDV LEWIQRYGAC SEPLAGKWFS QLTLGIAYLH SKGIVH---- bmy_16970T0/1-343 ILELVQGGDV LEWIQHYGAC SEPLAGKWFS QMTLGIAYLH SKGIVHRLTL BACU008674/1-327 ILELVQGGDV LEWIQHYGAC SEPLAGKWFS QMTLGIAYLH SKGIVH---- 151 200 ENSP00000339179/1-338 ---LMPSLSA AGRDLKLENL LLDKWENVKI SDFGFAKMVP SNQPVGCSPS ENSTTRP00000008179/1-334 ----TPSLSA AGRDLKLENL LLDKWKNVKI SDFGFAKMVP SSQSVRSSPS ENSBTAP00000044369/1-326 ---------- --RDLKLENL LLDKRENVKI SDFGFAKMVP SNQSVRNSPS bmy_16970T0/1-343 SPLLTPSLSA AGRDLKLENL LLDKRENVKI SDFGFAKMVP SNQSVRSSPS BACU008674/1-327 ---------- --RDLKLENL LLDKRENVKI SDFGFAKMVP SNQSVRSSPS 201 250 ENSP00000339179/1-338 YRQVNCFSHL SQTYCGSFAY ACPEILRGLP YNPFLSDTWS MGVILYTLVV ENSTTRP00000008179/1-334 YRQGNCFSHL SQTYCGSFAY ACPEVLLGLP YNPFLSDIWS MGVILYTLVV ENSBTAP00000044369/1-326 YRQMNCFSHL SQTYCGSFAY ACPEILLGLP YNPFLSDTWS MGVILYTLVV bmy_16970T0/1-343 YRQVNCFSHL SQTYCGSFAY ACPEILLGLP YNPFLSDTWS MGVILYTLVV BACU008674/1-327 YRQVNCFSHL SQTYCGSFAY ACPEILLGLP YNPFLSDTWS MGVILYTLVV 251 300 ENSP00000339179/1-338 AHLPFDDTNL KKLLRETQKE VTFPANHTIS QECKNLILQM LRQATKRATI ENSTTRP00000008179/1-334 ARLPFDDTNL KKLLRETQKE VTFPPNYAIS QECKNLVLQT LCQATKRATI ENSBTAP00000044369/1-326 ARLPFDDTNL KKLLKETQKE VTFPPNYAIS QECKNLILQT LRQAPKRATI bmy_16970T0/1-343 ARLPFDDTNL KKLLRETQKE VTFPPNYAIS QECKNLVLQT LRQATKRATI BACU008674/1-327 ARLPFDDTNL KKLLRETQKE VTFPPNYAIS QECKNLVLQT LRQATKRATI 301 350 ENSP00000339179/1-338 LDIIKDSWVL KFQPEQPTHE IRLLEAMCQL HNTTKQHQSL QITT ENSTTRP00000008179/1-334 LDIIKDPWVL KFQPEQPTHE IRLLEAMCQP PG-TNRHQSL EIST ENSBTAP00000044369/1-326 LDIIKDPWVL KFQPEQPTHE IRLLEAMCQP PSTTNRHQSL EIST bmy_16970T0/1-343 LDIIKDPWVL KFQPEQPTHE IRLLEAMCQP PSTTNRHQSL EIST BACU008674/1-327 LDIIKDPWVL KFQPEQPTHE IRLLEAMCQP PSTTNRHQSL EIST