KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:56 2014 Check: 00 .. Name: ENSP00000199447/1-588 Len: 614 Check: 519 Weight: 1.00 Name: ENSBTAP00000044371/1-410 Len: 614 Check: 6754 Weight: 1.00 Name: bmy_07177T0/1-511 Len: 614 Check: 2564 Weight: 1.00 Name: ENSTTRP00000003855/1-587 Len: 614 Check: 6861 Weight: 1.00 // 1 50 ENSP00000199447/1-588 MASKKREVQL QTVINNQSLW DEMLQNKGLT VIDVYQAWCG PCRAMQPLFR ENSBTAP00000044371/1-410 MAGKKREIQL QAVINNQSLW DEMMQNKGLT VIDVYQAWCG PCKAMQTLFR bmy_07177T0/1-511 ---------- ---------M TKV------- ---------- PCVFHQQQII ENSTTRP00000003855/1-587 MASKQREIQL QETINNQSLW EEMLQNKGLT VIDVYQAWCG PCKAMQTLFR 51 100 ENSP00000199447/1-588 KLKNELNEDE ILHFAVAEAD NIVTLQPFRD KCEPVFLFSV NGKIIEKIQG ENSBTAP00000044371/1-410 KLKNELNEDE LLHFAVAEAD SIVTLQPLRD KCEPVFLFSV NGTIVAKIQG bmy_07177T0/1-511 RGKEQ----- ------AEAD SIVTLQPFRD KCEPVFLFSV NGKIVAKIKG ENSTTRP00000003855/1-587 KLKNELNEDE ILHFAVAEAD SIVTLQPFRD KCEPVFLFSV NGKIVAKIKG 101 150 ENSP00000199447/1-588 ANAPLVNKKV INLIDEERKI AAGEMARPQY PEIPLVDSDS EVSEESPCES ENSBTAP00000044371/1-410 ANAPLVNQKI IALVNEERKI AAGEMVRPQY HEIAFVDSDS EDAGELNYES bmy_07177T0/1-511 ANAPLVSQTI ITLINEERKI AA-------- ---------- ---------- ENSTTRP00000003855/1-587 ANAPLVSQKI ITLINEEKKI AAGEMVRPQY HEIVFVDSDS EDAGEASYGS 151 200 ENSP00000199447/1-588 VQELYSIAII KPDAVISKKV LEIKRKITKA GFIIEAEHKT VLTEEQVVNF ENSBTAP00000044371/1-410 VDQIYTIVII KPDAVAARKV QEIKEKIIKA GFVIEAEDKK PLTEEQVKHF bmy_07177T0/1-511 -DQLYSIAII KPNAVTARKV QEIKEKIIDA EFVIEAEDKK LLTEEQVRYF ENSTTRP00000003855/1-587 VDQLYSIAII KPNAVTARKV KEIKEKIIDA EFVIEAEDKK MLTEEQVRYF 201 250 ENSP00000199447/1-588 YSRIADQCDF EEFVSFMTSG LSYILVVSQG SKHNPPSEET EPQTDTEPNE ENSBTAP00000044371/1-410 YSQIVDQPDF EDFVSFMTRN LSYILVVSQA KAKQPSWDES EVNSETESKE bmy_07177T0/1-511 YSRIADQPDF EDFVSFMTSG LSYILVVSQG KEKQPSWDES ESNSETESKE ENSTTRP00000003855/1-587 YSRIADQPDF EEFVSFMTSG LSYILVVSQA KEKWPSWDGS ESNSETESKE 251 300 ENSP00000199447/1-588 RSEDQPEVEA QVTPGMMKNK QD-------- ---------- ---SLQEYLE ENSBTAP00000044371/1-410 PWDEQQEM-- -AKPSRMKER K--------- ---------- ---SLQQYLE bmy_07177T0/1-511 PWDDHQET-- -AKSSGMKEK RERDSEVLCP FTQGIYNYIL DFNSFQECLE ENSTTRP00000003855/1-587 PWDDHEDG-- ---QPRMKQK RE-------- ---------- ---SFQEYLE 301 350 ENSP00000199447/1-588 RQHLAQLCDI EEDAANVAKF MDAFFPDFKK MKSMKLEKTL ALLRPNLFHE ENSBTAP00000044371/1-410 IQQISQFCDV EENITN-TKF IDVLIPDFKK IRGIKFEKIL ALLRPALANE bmy_07177T0/1-511 RQQISQFCDV EENISN-TKF IDVFIPDFKK IKGIKLEKIL ALLRPALFNE ENSTTRP00000003855/1-587 RQQVSQFCDV EENISN-TKF IDVFIPDFKK IKGIKLEKIL ALLRPALFNK 351 400 ENSP00000199447/1-588 RKDDVLRIIK DEDFKILEQR QVVLSEKEAQ ALCKEYENED YFNKLIENMT ENSBTAP00000044371/1-410 RTEDVLNKIQ DEGFKILLQR QIVLSEEEAK TLCKEYENKD YFGNVIENMT bmy_07177T0/1-511 RKEDVLNIIQ DEGFKILMQR QIVLSEEEAK TLCMEYENKD YFRNLIENMT ENSTTRP00000003855/1-587 RKEDVLNIIQ DEGFKILMQR QIVLSEKEAK TLCMEHENKD YFGNLIENMT 401 450 ENSP00000199447/1-588 SGPSLALVLL RDNGLQYWKQ LLGPRTVEEA IEYFPESLCA QFAMDSLPVN ENSBTAP00000044371/1-410 SGPSLALVLV RENGLGHWKQ LIGPSNVEEA KEYLPE---- ---------- bmy_07177T0/1-511 SGPSLALVLV RENGLGHWKQ LIGPSTVEEA KGYLPDSLCA QFAMESLPIN ENSTTRP00000003855/1-587 SGPSLVLVLV RENGLGHWKQ LIGPSSVEEA KEYLPDSLCA QFAMESLPIN 451 500 ENSP00000199447/1-588 QLYGSDSLET AEREIQHFFP LQSTLGLIKP HATSEQREQI LKIVKEAGFD ENSBTAP00000044371/1-410 ---------- ---------- ---------- ---------- ---------- bmy_07177T0/1-511 QLYGSDSLEA AERDIQYFFP PQHTAALIKP HVTQEQRGKY IKI------- ENSTTRP00000003855/1-587 QLYGSDSLEA AERDIQYFFP PEHTAALIKP HVTQEQREDI LTLIKEAGFD 501 550 ENSP00000199447/1-588 LTQVKKMFLT PEQIEKIYPK VTGKDFYKDL LEMLSVGPSM VMILTKWNAV ENSBTAP00000044371/1-410 ---------- ---------- ---------- ---------- ---------- bmy_07177T0/1-511 -----ELILY SCQQSKSSES I--------- --VVCRGPSL VMILTKWNAV ENSTTRP00000003855/1-587 ITQMKETLLT EEEADKIYFK IKGKAFYKDV LEVLSEGPSL VMILTKWNAI 551 600 ENSP00000199447/1-588 AEWRRLMGPT DPEEAKLLSP DSIRAQFGIS KLKNIVHGAS NAYEAKEVVN ENSBTAP00000044371/1-410 ---------- ---------- ---------- ---------- ---------- bmy_07177T0/1-511 SDWRRLMGPT DPEEARLLSP DSIRAQFGRS ILKNAVHGAS NVQEAVETIN ENSTTRP00000003855/1-587 SDWRRLMGPT DPEEARFLSP DSIRAQFGRS MLKNAVHGAS DMQEAVEAIN 601 650 ENSP00000199447/1-588 RLFED----- PEEN ENSBTAP00000044371/1-410 ---------- ---- bmy_07177T0/1-511 RVFEDFVAEN PEKN ENSTTRP00000003855/1-587 RVFEDFVAEN PEKN