KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:58 2014 Check: 00 .. Name: ENSTTRP00000002600/1-438 Len: 481 Check: 5778 Weight: 1.00 Name: ENSBTAP00000044383/1-436 Len: 481 Check: 4434 Weight: 1.00 Name: ENSP00000301463/1-442 Len: 481 Check: 3378 Weight: 1.00 Name: bmy_04667T0/1-412 Len: 481 Check: 7846 Weight: 1.00 Name: BACU008066/1-473 Len: 481 Check: 7161 Weight: 1.00 // 1 50 ENSTTRP00000002600/1-438 ---------- ---------- ---------- -MRRTRRPRF VLMNKMDDLN ENSBTAP00000044383/1-436 ---------- ---------- ---------- -MRRTRRPRF VLMNKMDDLN ENSP00000301463/1-442 ---------- ---------- ---------- -MRRTRRPRF VLMNKMDDLN bmy_04667T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU008066/1-473 MCVVAVAEEL VSGAQRPMDE EDAAAPVGGD RGRGPGGLGF VLMNKMDDLN 51 100 ENSTTRP00000002600/1-438 LHYRFLNWRR RIREIREVRA FRYQERFKHI LVDGDTLSYH GNSGEVGCYV ENSBTAP00000044383/1-436 LHYRFLNWRR RIREIREVRA FRYQERFKHI LVDGDTLSYH GNSGEVGCYV ENSP00000301463/1-442 LHYRFLNWRR RIREIREVRA FRYQERFKHI LVDGDTLSYH GNSGEVGCYV bmy_04667T0/1-412 ---------- ---------A FRYQERFKHI LVDGDTLSYH GNSGEVGCYV BACU008066/1-473 LHYRFLNWRR RIREIREVRA FRYQERFKHI LVDGDTLSYH GNSGEVGCYV 101 150 ENSTTRP00000002600/1-438 ASRPVTKDSN YFEVSIVDSG VRGTIAVGLV PQYYSLDHQP GWLPDSVAYH ENSBTAP00000044383/1-436 ASRPLTKDSN YFEVSIVDSG VRGTIAVGLV PQYYSLDHQP GWLPDSVAYH ENSP00000301463/1-442 ASRPLTKDSN YFEVSIVDSG VRGTIAVGLV PQYYSLDHQP GWLPDSVAYH bmy_04667T0/1-412 ASRPLTKDSN YFEVSIVDSG VRGTIAVGLV PQYYSLDHQP GWLPDSVAYH BACU008066/1-473 ASRPLTKDSN YFEVSIVDSG VRGTIAVGLV PQYYSLDHQP GWLPDSVAYH 151 200 ENSTTRP00000002600/1-438 ADDGKLYNGR AKGRQFGSKC NSGDRIGCGI EPVSFDVQTA QIFFTKNGKR ENSBTAP00000044383/1-436 ADDGKLYNGR AKGRQFGSKC NSGDRIGCGI EPVSFDVQTA QIFFTKNGKR ENSP00000301463/1-442 ADDGKLYNGR AKGRQFGSKC NSGDRIGCGI EPVSFDVQTA QIFFTKNGKR bmy_04667T0/1-412 ADDGKLYNGR AKGRQFGSKC NSGDRIGCGI EPVSFDVQTA QIFFTKNGKR BACU008066/1-473 ADDGKLYNGR AKGRQFGSKC NSGDRIGCGI EPVSFDVQTA QIFFTKNGKR 201 250 ENSTTRP00000002600/1-438 VGSTIMPMSP DGLFPAVGMH SLGEEVRLHL NAELGREDDG CTTSDKGEGG ENSBTAP00000044383/1-436 VGSTIMPMSP DGLFPAVGMH SLGEEVRLHL NAELGREDDS VMMVDSYEDE ENSP00000301463/1-442 VGSTIMPMSP DGLFPAVGMH SLGEEVRLHL NAELGREDDS VMMVDSYEDE bmy_04667T0/1-412 VGSTIMPMSP DGLFPAVGMH SLGEEVRLHL NAELGREDDS VMMVDSYEDE BACU008066/1-473 VGSTIMPMSP DGLFPAVGMH SLGEEVRLHL NAELGREDDS VMMVDSYEDE 251 300 ENSTTRP00000002600/1-438 WQNPGVHR-- --LLEYLGKG KSIVDVGLAQ ARHPLSTRSH YFEVEIVDPG ENSBTAP00000044383/1-436 WGRLHDVRVC GTLLEYLGKG KSIVDVGLAQ ARRPLSTRSH YFEVEIVDPG ENSP00000301463/1-442 WGRLHDVRVC GTLLEYLGKG KSIVDVGLAQ ARHPLSTRSH YFEVEIVDPG bmy_04667T0/1-412 WGRLHDVRVC GTLLEYLGKG KSIVDVGLAQ ARHPLSTRSH YFEVEIVDPG BACU008066/1-473 WGRLHDVRVC GTLLEYLGKG KSIVDVGLAQ ARHPLSTRSH YFEVEIVDPG 301 350 ENSTTRP00000002600/1-438 EKCYIALGLA RKDYPKNRHP GWSRGSVAYH AD-------- DGKIFHGSGV ENSBTAP00000044383/1-436 EKCYIALGLA RKDYPKNRHP GWSRGSVAYH AD-------- DGKIFHGSGV ENSP00000301463/1-442 EKCYIALGLA RKDYPKNRHP GWSRGSVAYH AD-------- DGKIFHGSGV bmy_04667T0/1-412 EKCYIALGLA RKDYPKNRHP GWSRGSVAYH AGLPLERRSY DGKIFHGSGV BACU008066/1-473 EKCYIALGLA RKDYPKNRHP GWSRGSVAYH AD-------- DGKIFHGSGV 351 400 ENSTTRP00000002600/1-438 GDPFGPRCYK GDIMGCGIMF PRDYILDSEG DSDDSCDTVI LSPTARAVRN ENSBTAP00000044383/1-436 GDPFGPRCYK GDIMGCGIMF PRDYILDSEG DSDDSCDTVI LSPTARAVRN ENSP00000301463/1-442 GDPFGPRCYK GDIMGCGIMF PRDYILDSEG DSDDSCDTVI LSPTARAVRN bmy_04667T0/1-412 GDPFGPRCYK GDIMGCGIMF PRDYILDSEG DSDDSCDTVI LSPTARAVRN BACU008066/1-473 GDPFGPRCYK GDIMGCGIMF PRDYILDSEG DSDDSCDTVI LSPTARAVRN 401 450 ENSTTRP00000002600/1-438 VRNVMYLHQE GEEEEEEEEE EDDGEEIEQE HEGKKVVVFF TRNGKIXXXX ENSBTAP00000044383/1-436 VRNVMYLHQE GEEEEEEEEE EDDGEEIEQE HEGKKVVV-- -SAG---GKK ENSP00000301463/1-442 VRNVMYLHQE GEEEEEEEEE EEDGEEIEPE HEGRKVVVFF TRNGKIIGKK bmy_04667T0/1-412 VRNVMYLHQE GEEEEEEEEE EDDGEEIEQE HEGKKVVVFF TRNGKIIGKK BACU008066/1-473 VRNVMYLHQE GEEEEEEEEE EDDGEEIEQE HEGKKVVVFF TRNGKIIGKK 451 500 ENSTTRP00000002600/1-438 XXXXXXXXXX XXXXXXXXXX XXXVDLHPLS G ENSBTAP00000044383/1-436 DAVVPSGGFF PTIGMLSCGE KVKVDLHPLS G ENSP00000301463/1-442 DAVVPSGGFF PTIGMLSCGE KVKVDLHPLS G bmy_04667T0/1-412 DALVPSGGFF PTIGMLSCGE KVKVDLHPLS G BACU008066/1-473 DAVVPSGGFF PTIGMLSCGE KVKVDLHPLS G