KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:02 2014 Check: 00 .. Name: bmy_11737T0/1-345 Len: 457 Check: 6249 Weight: 1.00 Name: ENSP00000420161/1-344 Len: 457 Check: 3728 Weight: 1.00 Name: BACU009308/1-451 Len: 457 Check: 4112 Weight: 1.00 Name: ENSTTRP00000014646/1-343 Len: 457 Check: 6200 Weight: 1.00 Name: ENSBTAP00000044479/1-341 Len: 457 Check: 5804 Weight: 1.00 // 1 50 bmy_11737T0/1-345 MLPGGNSGVG PRGPASRFWS RHQHLSPCRE NQREEAPSSL EPSFPSVSTG ENSP00000420161/1-344 ------MGFN LTFHLSYKFR LLLLLTLCLT VVGWATSNYF VGAIQEIPKA BACU009308/1-451 ------MGFN VTFHLSYKFR LLLLFTLCLT VVGWATSNYF VGAIQEIPKA ENSTTRP00000014646/1-343 ------MSFN VTLHLSYKFR LLLLFTLCLT VVGWATSNYF VGAIQEISKA ENSBTAP00000044479/1-341 ------MNFN VTFHLSYKFR LLLLFTLCLT VVGWATSNYF VGAIQEIPKA 51 100 bmy_11737T0/1-345 KPIA-----D PSLGPSGADE WDCWSGTTKQ KQALHCQLSS EGQNKLVFKP ENSP00000420161/1-344 KEFMANFHKT LILGKGKTLT NEASTKKVEL DNCPSVSPYL RGQSKLIFKP BACU009308/1-451 KDLMASLNKG LVLGEKGTVT EEASVKKANL NNCSSVSPHL KGQNKLVFKP ENSTTRP00000014646/1-343 KDLMASLNKD VVLGKKGAVT EEASVKKADL NNCSSVSPHL KGQNKLVFKP ENSBTAP00000044479/1-341 KDLVASLSKG VILGKKGTVT DEAFVEKARL DNCPSVSPHL KGQTKLVFKP 101 150 bmy_11737T0/1-345 DLTLEEVQAE NPEVHRGRYH PEECRALQRV AILIPHRHRE KHLLYLLEHL ENSP00000420161/1-344 DLTLEEVQAE NPKVSRGRYR PQECKALQRV AILVPHRNRE KHLMYLLEHL BACU009308/1-451 DLTLEEVQAE NPEVHRGRYH PEECRALQRV AILIPHRHRE KHLLYLLEHL ENSTTRP00000014646/1-343 DLTLEEVQAE NPKVHRGRYH PEECRALQRV AILIPHRHRE KHLLYLLEHL ENSBTAP00000044479/1-341 DLTLEEVQAK NPKVHRGRYH PEECRALQRV AILIPHRHRE KHLLYLLEHL 151 200 bmy_11737T0/1-345 HPFLQRQQLE YGIYVIHQAG SKKFNRAKLL NVGYLEALKD EIWDCFIFHD ENSP00000420161/1-344 HPFLQRQQLD YGIYVIHQAE GKKFNRAKLL NVGYLEALKE ENWDCFIFHD BACU009308/1-451 HPFLQRQQLE YGIYVIHQAG SKKFNRAKLL NVGYLEALKD EIWDCFIFHD ENSTTRP00000014646/1-343 HPFLQRQQLE YGIYVIH-AG SNKFNRAKLL NVGYIEALKD EIWDCFIFHD ENSBTAP00000044479/1-341 HPFLQRQQLD YGIYVIHQAG SKKFNRAKLL NVGYIEALKD EIWDCFIFHD 201 250 bmy_11737T0/1-345 VDLVPENDLN LYKCEDQPRH LVVGRNSTGY RLRYSGYFGG VTALSREQFF ENSP00000420161/1-344 VDLVPENDFN LYKCEEHPKH LVVGRNSTGY RLRYSGYFGG VTALSREQFF BACU009308/1-451 VDLVPENDLN LYKCEDQPRH LVVGRNSTGY RLRYSGYFGG VTALSREQFF ENSTTRP00000014646/1-343 VDLVPENDLN LYKCEDQPRH LVVGRNSTGY RLRYSGYFGG VTALSREQFF ENSBTAP00000044479/1-341 VDLVPENDLN LYRCEDQPRH LVVGRNSTGY RLRYSGYFGG VTALSREQFF 251 300 bmy_11737T0/1-345 KVNGFSNNYW GWGGEDDDLR LRVELHRMKI TRPLPEVGKY TMIFHKRDQG ENSP00000420161/1-344 KVNGFSNNYW GWGGEDDDLR LRVELQRMKI SRPLPEVGKY TMVFHTRDKG BACU009308/1-451 KVNGFSNNYW GWGGEDDDLR LRVELHRMKI TRPLPEVGKY TMIFHKRDQG ENSTTRP00000014646/1-343 KVNGFSNNYW GWGGEDDDLR LRVELHRMKI TRPLREVGKY TMIFHKRDQG ENSBTAP00000044479/1-341 KVNGFSNNYW GWGGEDDDLR LRVELHRMKI TRPLPEVGKY TMIFHKRDQG 301 350 bmy_11737T0/1-345 NEVNVERM-- ---------- ---------K LL--HQVS-- RVWRTD---- ENSP00000420161/1-344 NEVNAERM-- ---------- ---------K LL--HQVS-- RVWRTD---- BACU009308/1-451 NEVNVERAPC PPQPWGLRAG AVRALRTGPA LLSGHKFTDK REWVTTENGV ENSTTRP00000014646/1-343 NEVNIERM-- ---------- ---------K LL--HQVS-- RVWRTD---- ENSBTAP00000044479/1-341 NEVNIGRM-- ---------- ---------N LL--HQVS-- RVWRTD---- 351 400 bmy_11737T0/1-345 ---GLSS--- --------CD YKLLSVDYNP ---------- -----LYVNI ENSP00000420161/1-344 ---GLSS--- --------CS YKLVSVEHNP ---------- -----LYINI BACU009308/1-451 GTVGISNFAQ EALGDVVYCS LPEVGIKLNK QEEFGALESG KAASELYSPV ENSTTRP00000014646/1-343 ---GLSS--- --------CD YKLLSVDYNP ---------- -----LYVNI ENSBTAP00000044479/1-341 ---GLSS--- --------CG YKLLSVNYNP ---------- -----LYVNI 401 450 bmy_11737T0/1-345 TVDF------ ---------- -------WSG P--------- ---------- ENSP00000420161/1-344 TVDF------ ---------- -------WFG A--------- ---------- BACU009308/1-451 SGEVTKTNEA LAENPGLFNK SCYEDGWLIK MTLSNPSELD ELMSEEAYEK ENSTTRP00000014646/1-343 TVDF------ ---------- -------WSG P--------- ---------- ENSBTAP00000044479/1-341 SG-F------ ---------- -------LV- ---------- ---------- 451 500 bmy_11737T0/1-345 ------- ENSP00000420161/1-344 ------- BACU009308/1-451 YIKSIEE ENSTTRP00000014646/1-343 ------- ENSBTAP00000044479/1-341 -------