KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:06 2014 Check: 00 .. Name: ENSP00000355775/1-232 Len: 237 Check: 8935 Weight: 1.00 Name: ENSBTAP00000044510/1-237 Len: 237 Check: 6031 Weight: 1.00 Name: BACU001658/1-124 Len: 237 Check: 7846 Weight: 1.00 Name: bmy_10518T0/1-209 Len: 237 Check: 1533 Weight: 1.00 Name: ENSTTRP00000004483/1-237 Len: 237 Check: 6623 Weight: 1.00 // 1 50 ENSP00000355775/1-232 MATAESRALQ FAEGAAFPAY RAPHAGGALL PPPSPAAALL PAPPAGPG-- ENSBTAP00000044510/1-237 MAAAESSQLQ FEEIAAPPAY LPAHPGGAFL PPPNPNAGLL LARPSGSAPE BACU001658/1-124 ---------- ---------- ---------- ---------- ---------- bmy_10518T0/1-209 MAAAEPSQLQ FGEIAAPPAY RPAHPGGAFL PPPNPAAALL PARPSGPGPE ENSTTRP00000004483/1-237 MAAAEPSQLQ FGEIAAPPAY RPAHPGGAFL PPPNPAAALL PARPSGPGPE 51 100 ENSP00000355775/1-232 ---PATFAGF LGRDPGPAPP PPASLGSPAP PKGAAAPSAS QRRKRTSFSA ENSBTAP00000044510/1-237 LGAPVAFAGF LGRGPGPAAP PHAGLGPPAP PKGAAVSSAS QRRKRTSFRP BACU001658/1-124 ---------- ---------- ---------- ---------- ---------- bmy_10518T0/1-209 RGAPVAFAGF LGRGPGPAAP PSAALGPPAP PKGAAVPSAS QRRKRTSFRP ENSTTRP00000004483/1-237 RGAPVAFAGF LGRGPGPAAP PSAALGPPAP PKGAAVPSAS QRRKRTSFRP 101 150 ENSP00000355775/1-232 EQLQLLELVF RRTRYPDIHL RERLAALTLL PESRIQVWFQ NRRAKSRRQS ENSBTAP00000044510/1-237 EQLQLLELVF RRTMYPDIHL RERLAALTLL PESRIQVWFQ NRRAKSRRQS BACU001658/1-124 ---------- ---MYPDIHL RERLAALTLL PESRIQVWFQ NRRAKSRRQS bmy_10518T0/1-209 EQLQLLEL-- ---------- ---------- ------VWFQ NRRAKSRRQS ENSTTRP00000004483/1-237 EQLQLLELVF RRTMYPDIHL RERLAALTLL PESRIQVWFQ NRRAKSRRQS 151 200 ENSP00000355775/1-232 GKSFQPLARP EIILNHCAPG TETKCLKPQL PLEVDVNCLP EPNGVGGGIS ENSBTAP00000044510/1-237 GKPFQPSARP ELFLHHSACE TEAKYLKAQP PLEVDVNCLP DPNKVGGGIS BACU001658/1-124 GKSFQPSARP ELFLHHSACE TEAEYLKPQL PLEVDVNCLP DPNKVGGDIS bmy_10518T0/1-209 GKSFQPSARP ELFLHHSACE TEAEYLKPQL PLEVDVNCLP HPNKVGGDIS ENSTTRP00000004483/1-237 GKSFQPSARP ELFLHHSACE TEAEYLKPQL PLEVDVNCLP DPNKVGGDIS 201 250 ENSP00000355775/1-232 DSSSQGQNFE TCSPLSEDIG SKLDSWEEHI FSAFGNF ENSBTAP00000044510/1-237 DSSSQSQNFE TCSPLSEDIG SKLDSWEEHI FSAFGNS BACU001658/1-124 DPSSQAQNFE TYSPLSEDIG SKLDSWEEHI FSAFGNS bmy_10518T0/1-209 DPSSQAQNFE TYSPLSEDIG SKLDSWEEHI FSAFGNS ENSTTRP00000004483/1-237 NPSSQAQNFE TYSPLSEDIG SKLDSWEEHI FSAFGNS