KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:08 2014 Check: 00 .. Name: ENSP00000300504/1-336 Len: 391 Check: 9206 Weight: 1.00 Name: ENSBTAP00000044529/1-299 Len: 391 Check: 2981 Weight: 1.00 Name: bmy_11983T0/1-384 Len: 391 Check: 8855 Weight: 1.00 Name: BACU017927/1-389 Len: 391 Check: 2894 Weight: 1.00 Name: ENSTTRP00000000053/1-329 Len: 391 Check: 7047 Weight: 1.00 // 1 50 ENSP00000300504/1-336 MTTLSPENSL SARQSASFIL VKRKPPIDKT EWDSFFDESG HLAKSRDFIC ENSBTAP00000044529/1-299 MTTLSPENSL SARQSASFIL VKRKPPIDKT EWDGFFDENG HLAKSRDFIC bmy_11983T0/1-384 MAKLSPGIPF VNS------- VKRKPPIDKT EWDGFFDENG HLAKSRDFIC BACU017927/1-389 MTTLSPENSL SARQSASFIL VKRKPPIDKT EWDGFFDENG HLAKSRDFIC ENSTTRP00000000053/1-329 MTTLSPENSL SARQSASFIL VKRKPPIDKT EWDGFFDENG HLAKSRDSIC 51 100 ENSP00000300504/1-336 VNILERGLHP FVRTEAWKFL TGYFSWQSSQ DERLTVDSMR RKNYKALCQM ENSBTAP00000044529/1-299 VNILERGLHP TVRTEAWKFL TGYYSWQSSQ DERLTVDSTR RKNYEALCQM bmy_11983T0/1-384 VNILERGLHP FVRTEAWKFL TGYYSWQSSQ DERLMVDSTR RKNYEALCQM BACU017927/1-389 VNILERGLHP FVRTEAWKFL TGYYSWQSSQ DERLMVDSTR RKNYEALCQM ENSTTRP00000000053/1-329 VNILERGLHP FVRTEAWKFL TGYYSWQSSQ DERLMVDSTR RKNYKALCQM 101 150 ENSP00000300504/1-336 YEKIQPLLEN LHRNFTETRN NIARDIQKIY DKDPLGNVLI DKKRLEKILL ENSBTAP00000044529/1-299 YQKIQPLLEN LHRNFIETRN SI-------- ---------- ---------- bmy_11983T0/1-384 YEKIQPLLEN LHRNFIETRN NIAYDIQKLY DKDPLGNVLI DKKRLEKILL BACU017927/1-389 YEKIQPLLEN LHRNFIETRN NIAYDIQKLY DKDPLGNVLI DKKRLEKILL ENSTTRP00000000053/1-329 YEKIQPLLEN LHRNFIETRN NIAYDIQKLY DKDPLGNVLI DKKRLEKILL 151 200 ENSP00000300504/1-336 LSYVCNTQAE YQQGFHEMMM LFQLMVEHDH ETFWLFQFFL QKTEHSCVIN ENSBTAP00000044529/1-299 ---------K YQQGFHEMVM IFQLMVEHDH ETFWLFQFFL QKTEHSCVIN bmy_11983T0/1-384 LSYVCNTQAE YQQGFHEMVM LFQLMVEHDH ETFWLFQFFL QKTEHSCVIS BACU017927/1-389 LSYVCNTQAE YQQGFHEMVM LFQLMVEHDH ETFWLFQFFL QKTEHSCVIN ENSTTRP00000000053/1-329 LSYVCNTQAE YQQGFHEMVM LFQLMVEHDH ETFWLFQFFL QKTEHSCVIN 201 250 ENSP00000300504/1-336 IGVAKNLDML STLITFLDPV FAEHLKGKGA GAVQSLFPWF CFCFQRAFKS ENSBTAP00000044529/1-299 IGVGKNLDML NTLINFLDPV FAEHLKGKGA GAVPSLFPWF CLCFQRAFKT bmy_11983T0/1-384 IGVGKNLDML NNLINFLDPV FAEHLKGKGA GAVQSLFPWF CLYFQRAFKS BACU017927/1-389 IGVGKNLDML NNLINFLDPV FAEHLKGKGA GAVQSLFPWF CLYFQRAFKS ENSTTRP00000000053/1-329 IGVGKNLDML NNVINFLDPV FAEHLKGKGA GAVQSLFPWF CLYFQRAFKS 251 300 ENSP00000300504/1-336 FDDVWRLWEV LLTGKPCRNF QVLVAYSMLQ MVREQVLQES MGGDDILLAC ENSBTAP00000044529/1-299 FDDVWRLWEV LLTGKPCRNF QVLVAYSMLQ MVRQQVLQES MTGDDILLAC bmy_11983T0/1-384 FDDVWRLWEV LLTGKPCRNF QVLVAYSMLQ MVREQVLQES MTGDDILLAC BACU017927/1-389 FDDVWRLWEV LLTGKPCRNF QVLVAYSMLQ MVRKQVLQES MTGDDILLAC ENSTTRP00000000053/1-329 FDDVWRLWEV LLTGKPCRNF QVLVAYSMLQ MVRTQVLQES MTGDDILLAC 301 350 ENSP00000300504/1-336 NNLIDLDADE LISAACVVYA ELIQKDV--- ---------- ---------- ENSBTAP00000044529/1-299 NNLIDLDADE LISAACIVYA ELIQKDV--- ---------- ---------- bmy_11983T0/1-384 NNLIDLDAAE LVSAACTVYA ELVQKDVSYP DYLSSFPSSS KKPSPVSQAQ BACU017927/1-389 NNLIDLDAAD LVSAACTVYA ELVQKDVRYP DYLSSFPSSS KKPSPVSQAQ ENSTTRP00000000053/1-329 NNLIDLDVAE LVSAACTAYA ELVQKDV--- ---------- ---------- 351 400 ENSP00000300504/1-336 ---------- ---------- PQTLKDFFL- ---------- - ENSBTAP00000044529/1-299 ---------- ---------- PQSLKDFFL- ---------- - bmy_11983T0/1-384 PLAGVFNFRD TACATFSATN PRGLLCMDFS QVCLCNSCLP K BACU017927/1-389 PMAGVLNFRD TACATFSAIN PRGLLCMDFS QGQAWALDV- - ENSTTRP00000000053/1-329 ---------- ---------- PQ-------- ---------- -