KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:08 2014 Check: 00 .. Name: ENSP00000264864/1-481 Len: 496 Check: 6863 Weight: 1.00 Name: ENSBTAP00000044532/1-487 Len: 496 Check: 536 Weight: 1.00 Name: bmy_02063T0/1-416 Len: 496 Check: 3794 Weight: 1.00 Name: ENSTTRP00000002801/1-486 Len: 496 Check: 6790 Weight: 1.00 // 1 50 ENSP00000264864/1-481 MEDPSEPDRL ASADGGS--P EEEEDGEREP LLPRIAWAHP RRGAPGSAVR ENSBTAP00000044532/1-487 MAEASEPGRP ESAGSGSL-E EDEGDEEREP LLPRIAWAQR RKVAPGGAVR bmy_02063T0/1-416 MAEPSEPGRQ ASAGGGSLEE EDEEDEEREP LLPRIAWAQP RKGAPGGAVR ENSTTRP00000002801/1-486 MAEPSEPGRQ ASAGGGSLEE EDEEDEEREP LLPRIAWAQP QKGAPGGAVR 51 100 ENSP00000264864/1-481 LLDAAGEEG- ----EAGDEE LPLPPGDV-- ------GVSR SSSAELDRSR ENSBTAP00000044532/1-487 LETAAGEEGA ASPSQASDRE LPLLPRDASF SSSPGLGRQR SSPTNLDRNR bmy_02063T0/1-416 LEKAAGEEGA ASPNQASDRE LLLLPRDASF SSSPSLGRLR SSPTNLDRNH ENSTTRP00000002801/1-486 LEKAVGEEGA ASPNQASDRE LLLLPRDA-- ------GVLR SSPTNLDRNH 101 150 ENSP00000264864/1-481 PAVSVTIGTS EMNAFLDDPE FADIMLRAEQ AIEVGIFPER ISQGSSGSYF ENSBTAP00000044532/1-487 PVG------S EMNTFLDDPE FADVILKAEQ AIEFEVYPER ISQGSSGSYF bmy_02063T0/1-416 PVG------S ELNTFLDDPE FADVILKAEQ AIEFGVYPER ISQGSSGSYF ENSTTRP00000002801/1-486 PVGSVIVGSS ELNTFLDDPE FADVILKAEQ AIEFGVYPER ISQGSSGSYF 151 200 ENSP00000264864/1-481 VKDPKRKIIG VFKPKSEEPY GQLNPKWTKY VHKVCCPCCF GRGCLIPNQG ENSBTAP00000044532/1-487 VKDPKRKIIG VFKPKSEEPY GHLNPKWTKY VHKVCCPCCF GRGCLLPNQG bmy_02063T0/1-416 VKDPKRNIIG VFKPKSEEPY GHLNPKWTKY VHKVCCPCCF GRGCLLPNQG ENSTTRP00000002801/1-486 VKDPKRNIIG VFKPKSEEPY GHLNPKWTKY VHKVCCPCCF GRGCLLPNQG 201 250 ENSP00000264864/1-481 YLSEAGAYLV DNKLHLSIVP KTKVVWLVSE TFNYNAIDRA KSRGKKYALE ENSBTAP00000044532/1-487 YLSEAGAYLV DEKLHLGIVP KTRVVWLVSE TFNYSAIDRA KSRGKKYALE bmy_02063T0/1-416 YLSEAGASLV DEKLHLGLVP KTRVVWLVSE TFNYSAIDRA KSRGKKYALE ENSTTRP00000002801/1-486 YLSEAGASLV DEKLHLGIVP KTRVVWLVSE TFNYSAIDRA KSRGKKYALE 251 300 ENSP00000264864/1-481 KVPKVGRKFH RIGLPPKIGS FQLFVEGYKE AEYWLRKFEA DPLPENIRKQ ENSBTAP00000044532/1-487 KVPKVGRKFH RIGLPPKIGS FQLFVEGYKE AEYWLRKFEA DPLPENIRKQ bmy_02063T0/1-416 KVPKVGRKFH RIGLPPK--- ---------- ---------- ---------- ENSTTRP00000002801/1-486 KVPKVGRKFH RKGLPPKIGS FQLFVEGYKE AEYWLRKFEA DPLTENIRKQ 301 350 ENSP00000264864/1-481 FQSQFERLVI LDYIIRNTDR GNDNWLVRYE KQKCEKEIDH KESKWIDDEE ENSBTAP00000044532/1-487 FQSQFERLVV LDYIIRNTDR GNDNWLIRCE KQTHEDEI-- TDTKWTDDKE bmy_02063T0/1-416 ---------- ---------- ---------- ---------- -ETKWTDDKE ENSTTRP00000002801/1-486 FQSQFERLVI LDYLIRNTDR GNDNWLIRYE NQKQEDEI-- TETKWTDDKE 351 400 ENSP00000264864/1-481 FLIKIAAIDN GLAFPFKHPD EWRAYPFHWA WLPQAKVPFS EEIRNLILPY ENSBTAP00000044532/1-487 TLIKIAAIDN GLAFPFKHPD EWRAYPFHWA WLPQAKVPFS EEIKNLVLPY bmy_02063T0/1-416 TLIKIAAIDN GLAFPFKHPD EWRAYPFHWA WLPQAKVPFS EEIRNLVLPY ENSTTRP00000002801/1-486 TLIKIAAIDN GLAFPFKHPD EWRAYPFHWA WLPQAKVPFS EEIRNLVLPH 401 450 ENSP00000264864/1-481 ISDMNFVQDL CEDLYELFKT DKGFDKATFE SQMSVMRGQI LNLTQALRDG ENSBTAP00000044532/1-487 ISDMNFVQDL CEDLCELFKM DRNFDKATFE KQMSVMRGQI LNLTQALRDK bmy_02063T0/1-416 ISDMNFVQDL CEDLYELFKT DRRFDKATFE RQMSVMRGQI LNLTQALRDR ENSTTRP00000002801/1-486 ISDMNFVQDL CEDLYELFKT DRRFDKATFE RQMSVMRGQI LNLTQALRDR 451 500 ENSP00000264864/1-481 KSPFQLVQIP CVIVERSQGG SQGRIVHLSN SFTQTVNCRK PFFSSW ENSBTAP00000044532/1-487 KTPVQLVQMP CVVVERSQGG GQGRIIQLSN SFTQTVHCRK PFFSSW bmy_02063T0/1-416 RSPVQLVQMP CVIVERSQGG GQGRIVHLSN SFTQTVHCRK PFFSSW ENSTTRP00000002801/1-486 RSPVQLVQMP CVIVERSQGG GQGRIVHLSN SFTQTVHCRK PFFSSW