KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:09 2014 Check: 00 .. Name: ENSP00000416683/1-643 Len: 1294 Check: 8692 Weight: 1.00 Name: ENSBTAP00000044542/1-610 Len: 1294 Check: 4124 Weight: 1.00 Name: BACU009223/1-1294 Len: 1294 Check: 4479 Weight: 1.00 Name: bmy_01930T0/1-697 Len: 1294 Check: 7514 Weight: 1.00 Name: ENSTTRP00000010796/1-606 Len: 1294 Check: 9279 Weight: 1.00 // 1 50 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 MEEARVEAEG DIGSERYTFS FTIRDSTTHF VNATSWGKED YIRSLSDGFR bmy_01930T0/1-697 MLAARQEGVN GAGASRLGWP VTR------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 VGECVIIENP LIQRKELERE EKFSPATPRL ESQNTLQLQT EEKARVIFAS bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 DVRISFDKFR NCMTATVISK TIITTNPDTP EANILLNFIR ENKETNPLDD bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 EIDSYLKEST NLNTIVDVYT VEQLKVKALK NEGKADPIYG ILYAYISTLN bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 IDDETTKVVR NRCSGCGYIV NEASSTCTTC KKDSSEFKSV FRSFHMLIDL bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 TDHTGPALLG IFLHHTDLRK SLTVEQGTMK VELLPALTDN YMYLIIDDDT bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 KEAAIVDPVQ PQKVVEMVRK HGVKLTTVLT THHHWDHAGG NEKLVKLEPG bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 LKVYGGDDRI GALTHKVTHL STLQVGSLNV KCLSTPCHTS GHICYFVSKP bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 NSPEPPVVFT GDTLFVAGCG KFYEGTADEM YKALLEVLGR LPPDTRVFCG bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000416683/1-643 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 HEYTINNLKF ARHVEPSNAA IQEKLAWAKE KYSIGEPTVP STIAEEFTYN bmy_01930T0/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000416683/1-643 --------MA LRKAGDLEPQ FT-------- ---------- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 PFMRVREKAV QQHAGEMDPV TTLRAIRKEK DQFKLRPAAA AVDVTPLYAS bmy_01930T0/1-697 --VLAAPEAV GKSRGQEQPA PT-------- ---------- ---------- ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000416683/1-643 ---------- -PERRF---- -RLCWYQAHS GRALLG---- ---------- ENSBTAP00000044542/1-610 ---------- ---------- ---------- ---------- ---------- BACU009223/1-1294 SRRVMTQRCC RRPPGFLRSL SQPSTGPCHS AAACVGFSKD DDVLGGAKAP bmy_01930T0/1-697 ---------- -DAPRSLPAY GLLCTRDGPE ERCVAEAWKV PCLACPGLTS ENSTTRP00000010796/1-606 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000416683/1-643 -----PPPQA ---------- ---------- ---------- ---------- ENSBTAP00000044542/1-610 -----APPQA ---------- ---------- ---------- ---------- BACU009223/1-1294 CEQQSPPPGC HGVGFARVLL ALCFMALYQR LDTQVQASQD MLRPRSVMPE bmy_01930T0/1-697 WAASVLPPQA ---------- ---------- ---------- ---------- ENSTTRP00000010796/1-606 ---------M ---------- ---------- ---------- ---------- 651 700 ENSP00000416683/1-643 ---------- ---------- SPP------- ---------- AGGLALALLL ENSBTAP00000044542/1-610 ---------- ---------- PLP------- ---------- AGVPALVVLL BACU009223/1-1294 GCCGPVGAVP IAPGGSCRWQ PLPRDTELLA SFHQQHSART RGGPALVVLL bmy_01930T0/1-697 ---------- ---------- PLP------- ---------- TGGPALVVLL ENSTTRP00000010796/1-606 ---------- ---------- ALR------- ---------- RGGPALVVLL 701 750 ENSP00000416683/1-643 LSWVALGPRS LEGADPGTPG EAEGPACPAA CVCSYDDDAD ELSVFCSSRN ENSBTAP00000044542/1-610 VSWAALGPHG LEGVEPVAPA DPEGLQCPAV CSCGHDDFTD ELSVFCSSRN BACU009223/1-1294 VSWAVLGSHS LEGEEPAAPA DPEGPQCPAV CSCGHDDYTD ELSVFCSSRN bmy_01930T0/1-697 VSWAVLGSHS LEGVEPAAPA DPEGPQCPAV CSCGHDDYTD ELSVFCGSRN ENSTTRP00000010796/1-606 VSWAVLGSHS LEEVESAAPA DPEGPQCPAV CSCGHDDYTD ELSVFCSSRN 751 800 ENSP00000416683/1-643 LTRLPDGVPG GTQALWLDGN NLSSVPPAAF QNLSSLGFLN LQGGQLGSLE ENSBTAP00000044542/1-610 LTQLPGGLPP GTRALWLDGN NFSSIPAAAF RNLSGLGFLN LQGSGLASLE BACU009223/1-1294 LTQLPNGIPD GTRALWLDGN NFSFIPAATF QNLSSLGFLN LQGSGLASLE bmy_01930T0/1-697 LTRLPNGIPD GTRALWLDGN NFSFIPAATF RNLSSLGFLN LQGSRLASLE ENSTTRP00000010796/1-606 LTRLPSGIPD GTRALWLDGN NFSFIPAATF RNLSSLGFLN LQGSGLASLE 801 850 ENSP00000416683/1-643 PQALLGLENL CHLHLERNQL RSLALGTFAH TPALASLGLS NNRLSRLEDG ENSBTAP00000044542/1-610 PQALLGLRGL CHLHLEHNRL HALAAHTFLH TPGLASLGLS NNLLSRLDEG BACU009223/1-1294 PHALLGLQNL YHLHLERNQL RSLAARTFLH TPGLASLGLN NNLLSRVDEG bmy_01930T0/1-697 PQALLGLQNL YHLHLERNQL RSLAARTFLH TPGLASLGLN NNLLSRVDEG ENSTTRP00000010796/1-606 PQALLGLQNL YYLHLERNQL RSLAARTFLH TPGLASLGLN NNLLSRVDED 851 900 ENSP00000416683/1-643 LFEGLGSLWD LNLGWNSLAV LPDAAFRGLG SLRELVLAGN RLAYLQPALF ENSBTAP00000044542/1-610 LFRGLAHLWD LNLGWNSLTV LPDTAFQGLA GLRELVLAGN KLAYLQPPLF BACU009223/1-1294 LFRGLAHLWD LNLGWNSLAV LPDTAFQDLA SLRELVLAGN KLAYLQPALF bmy_01930T0/1-697 LFRGLAHLWD LNLGWNSLAV LPDTAFQDLA SLRELVLAGN KLAYLQPALF ENSTTRP00000010796/1-606 LFRGLAHLWD LNLGWNSLAV LPDTAFQDLA SLRELVLAGN KLAYLQPALF 901 950 ENSP00000416683/1-643 SGLAELRELD L--SRNALRA IKANVFVQLP RLQKLYLDRN LIAAVAPGAF ENSBTAP00000044542/1-610 CGLGELRELD L--SRNTLRS VKANVFVKLP KLQKLYLDHN LVAAVAPGAF BACU009223/1-1294 CGLSELRELD LXXXXXXLRS VKANVFVKLP KLQKLYLDHN LIAAVAPGAF bmy_01930T0/1-697 CGLSELRELD L--SRNALRS VKANVFVKLP KLQKLYLDHN LIAAVAPGAF ENSTTRP00000010796/1-606 CGLSELRELD L--SRNALRS VKPNVFVKLP KLQKLYLDHN LITAVAPGAF 951 1000 ENSP00000416683/1-643 LGLKALRWLD LSHNRVAGLL EDTFPGLLGL RVLRLSHNAI ASLRPRTFKD ENSBTAP00000044542/1-610 LGMKALRWLD LSHNRVGSLL EDSFPGLLGL HVLRLSHNVL AGLRPRTFKD BACU009223/1-1294 LGMKALRWLD LSHNRVGGLL EDTFPGLLGL HVLRLSHNAI AGLRPRTFKD bmy_01930T0/1-697 LGMKALRWLD LSHNRVGGLL EDTFPGLLGL HVLRLSHNAI AGLRPRTFKD ENSTTRP00000010796/1-606 LGMKTLRWLD LSHNRVGGLL EDTFPGLLGL HVLRLSHNAI AGLRPRTFKD 1001 1050 ENSP00000416683/1-643 LHFLEELQLG HNRIRQLAER SFEGLGQLEV LTLDHNQLQE VKAGAFLGLT ENSBTAP00000044542/1-610 LHFLEELQLG HNRLRQLPEE AFAGLGQLEV LALNDNQLQE LRPGGFLGLR BACU009223/1-1294 LHFLEELQLG YNRIRQLPEE AFEGLDQLEV LALNNNQLQE LKAGVFLGLY bmy_01930T0/1-697 LHFLEELQLG YNRIRQLPEE AFEGLDQLEV LALNNNQLQE LKAGVFLGLY ENSTTRP00000010796/1-606 LHFLEELQLG YNRIRQLPEE AFEGLDQLEV LALNNNQLQE LKAGVFLGLY 1051 1100 ENSP00000416683/1-643 NVAVMNLSGN CLRNLPEQVF RGLGKLHSLH LEGSCLGRIR PHTFTGLSGL ENSBTAP00000044542/1-610 NLAVLNLSSN CLRDLPERAF QGLAKLHSLH LEGGCLARLG PLAFAGLSGL BACU009223/1-1294 NLAVMNLSGN CLRNLPEQAF QGLGKLHSLH LEGSCLGCLG PHTFTGLSGL bmy_01930T0/1-697 NLAVMNLSGN CLRNLPEQAF QGLGKLHSLH LEGSCLGCLG PHTFTGLSGL ENSTTRP00000010796/1-606 NLAVMNLSGN CLRNLPEQAF QGLGKLHSLH LEGSCLGCLG PHTFTGLSGL 1101 1150 ENSP00000416683/1-643 RRLFLKDNGL VGIEEQSLWG LAELLELDLT SNQLTHLPHR LFQGLGKLEY ENSBTAP00000044542/1-610 RRLFLKGNSI ADVDERSLGG LAELLELDLT ANQLTHLPGR LFQDLGRLEY BACU009223/1-1294 RRLFLKDNGI AAIDEQSLGG LAELLELDLT SNQLTHLPGQ LFQGLSHLEY bmy_01930T0/1-697 RRLFLKDNGI AAIDEQSLGG LAELLELDLT SNQLTHLPGQ LFQGLSHLEY ENSTTRP00000010796/1-606 RRLFLKDNGI AAIDEQSLGG LAELLELDLT SNQLTHLPGQ LFQGLSHLEY 1151 1200 ENSP00000416683/1-643 LLLSRNRLAE LPADALGPLQ RAFWLDVSHN RLEALPNSLL APLGRLRYLS ENSBTAP00000044542/1-610 LLLARNRLSA LPADALGPLQ RTFWLDVSHN RLEALPAAAL APLSRLRFLS BACU009223/1-1294 LLLSRNRLSA LSVDALGPLQ RIFWLDMSHN RLEALPETVL APLGRLRYLS bmy_01930T0/1-697 LLLSRNRLSA LSVDALGPLQ RIFWLDVSHN RLEALPETVL APLGRLRYLS ENSTTRP00000010796/1-606 LLLSRNRLSA LSVDALGPLQ RIFWLDVSHN RLEALPETVL APLGRLRYLS 1201 1250 ENSP00000416683/1-643 LRNNSLRTFT PQPPGLERLW LEGNPWDCGC PLKALRDFAL QNPSAVPRFV ENSBTAP00000044542/1-610 LRNNSLRTFA PQPPGLERLW LEGNPWDCGC ALGALRAFAL QQPASVPRFV BACU009223/1-1294 LRNNSLRTFV PQPPGLERLW LEGNPWDCGC PLKALRAFTL QHPGVVPRFV bmy_01930T0/1-697 LRNNSLRTFV PQPPGLERLW LEGNPWDCGC PLKALRAFTL QHPGVVPRFV ENSTTRP00000010796/1-606 LRNNSLRTFV PQPPGLERLW LEGNPWDCGC PLKALRAFTL QHPGVVPRFV 1251 1300 ENSP00000416683/1-643 QAICEG-DDC QPPAYTYNNI TCASPPEVVG LDLRDLSEAH FAPC ENSBTAP00000044542/1-610 QALAEGNDDR QPPVLAYNNI TCASPPSLAG LDLRDVGEAH FAHC BACU009223/1-1294 QAMAEGDDDR QPPAYTYNNI TCASPPSVLG LDLRDISEAH FAHC bmy_01930T0/1-697 QAVAEGDDDR QPPAYAYNNI TCASPPSVLG LDLRDVSEAH FAHC ENSTTRP00000010796/1-606 QAMAEGDDGH QPPAYAYNNI TCASPPSISG LDLRDIGEAH FAHC