KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:09 2014 Check: 00 .. Name: ENSBTAP00000044548/1-308 Len: 472 Check: 7317 Weight: 1.00 Name: ENSP00000253669/1-410 Len: 472 Check: 1694 Weight: 1.00 Name: BACU016699/1-397 Len: 472 Check: 6395 Weight: 1.00 Name: ENSTTRP00000002930/1-310 Len: 472 Check: 9130 Weight: 1.00 Name: bmy_02578T0/1-337 Len: 472 Check: 8157 Weight: 1.00 // 1 50 ENSBTAP00000044548/1-308 ---------- ---------- ---------- ---------- ---------- ENSP00000253669/1-410 ---------- ---------- --MADSSGRG AG-------- ---------- BACU016699/1-397 MQLKPWEQVP DKDPQGRERR EINADQNGLE QGPPQSQAHQ TTFQLPMSPP ENSTTRP00000002930/1-310 ---------- ---------- --MADTSGRG AG-------- ---------- bmy_02578T0/1-337 ---------- ---------- --MADTSGRG AG-------- ---------- 51 100 ENSBTAP00000044548/1-308 ---------- ---------- ---------- ---------- ---------- ENSP00000253669/1-410 ---------- ---------- KPAT-GPTNS SSAKKKDKRV QGGRVIESRY BACU016699/1-397 TAPGCLKRLE TPRPEHTSGR KPSAGGPSTP SGAKMRGRRI QGGRVVESRY ENSTTRP00000002930/1-310 ---------- ---------- KPSAGGPSTP SGAKTRGRRI QGGRVVESRY bmy_02578T0/1-337 ---------- ---------- KPSAGGPSTP SGAKTRGRRI QGGRVVESRY 101 150 ENSBTAP00000044548/1-308 ---------- ---------- --MPAGGTKS SQLQKSK-DG SGLDKGNLQS ENSP00000253669/1-410 LQYEKKTTQK APAGDGSQTR GKMSEGGRKS SLLQKSKADS SGVGKGDLQS BACU016699/1-397 LQYEKKTTKK APAVDALKAS GKMPEGGRKP NPLQKSK-DS SGIGKGDLQS ENSTTRP00000002930/1-310 LQYEKKTTKK PPAADALKAS GKMPEGGRKP NPLQKSKADS SGTGKGDLQS bmy_02578T0/1-337 LQYEKKTTKK APAADALKAS GKMPEGGRKP NPLQKSK-DS SGIGKGDLQS 151 200 ENSBTAP00000044548/1-308 TLLEGHDTAL SDLDLSAIHD KSVVRKTPQL KKK-SKKAEL SSSSAVSEKS ENSP00000253669/1-410 TLLEGHGTAP PDLDLSAIND KSIVKKTPQL AKTISKKPES TSFSAPRKKS BACU016699/1-397 TLLEGHGTAP PDLDLSAIN- ---------- ---------- ---------- ENSTTRP00000002930/1-310 TLLEGHGTAP PDLDLSAIND KSVVRKTPQL EKTMSKKAES SSFSALRKKS bmy_02578T0/1-337 TLLEGHGTAP PDLDLSAIN- ---------- ---------- ---------- 201 250 ENSBTAP00000044548/1-308 PDLLQAMEMM ESQTLLLTLL TVKMENGLSA FEEQAEKNLE ILCKEKEKLQ ENSP00000253669/1-410 PDLSEAMEMM ESQTLLLTLL SVKMENNLAE FERRAEKNLL IMCKEKEKLQ BACU016699/1-397 -----AMEMM ESQTLLLTLL TLKMESGLAA FEEKAENNLL IMCKEKEKLQ ENSTTRP00000002930/1-310 PDLSEAMEMM ESQTLLLTLL TLKMESGLAA FEEKAEKNLL IMCKEKEKLQ bmy_02578T0/1-337 -----AMEMM ESQTLLLTLL TLKMESGLAA FEEKAEKNLL IMCKEKEKLQ 251 300 ENSBTAP00000044548/1-308 KKAYELKRRL LLCQKKKELE DFLDVQIEML SPLEAVASRF REQYKTFAIA ENSP00000253669/1-410 KKAHELKRRL LLSQRKRELA DVLDAQIEML SPFEAVATRF KEQYRTFATA BACU016699/1-397 EKAHELKRQF LLCQRKRELA GVLDAQIEML SPCEAIAGCF KERYKTLATA ENSTTRP00000002930/1-310 KKAHELKRQF LLCQRKRELA DVLDAQIEML SPCEAIASCF KERYKTFATA bmy_02578T0/1-337 EKAHELKRQF LLCQRKRELA DVLDAQIEML SPCEAIAGCF KERYKTFATA 301 350 ENSBTAP00000044548/1-308 LDTTRHELPV KSVHLDGDRQ LFLDELQQEL KTTRHLLGEL GIGSSEDNAK ENSP00000253669/1-410 LDTTRHELPV RSIHLEGDGQ QLLDALQHEL VTTQRLLGEL DVGDSEENVQ BACU016699/1-397 LDTTRHELPV RSVHLDGDRQ CFLDKLQGEL TTTCHLLGEL GISSSEENAT ENSTTRP00000002930/1-310 LDTTRHELPV KSVHLDGDGQ CFLDKLQGEL TTTCHLLGEL GISSSEENAK bmy_02578T0/1-337 LDTTRHELPV RSVHLDGDGQ CFLDKLQGEL TTTCHLLGEL GISSSEENAT 351 400 ENSBTAP00000044548/1-308 AFNVLRELRE VIQKKDLELR RSVDQVLELS AEASKEAALI NQDVWEEAQG ENSP00000253669/1-410 VLDLLSELKD VTAKKDLELR RSFAQVLELS AEASKEAALA NQEVWEETQG BACU016699/1-397 ALDLLRELKE MTQEKDLELQ RSFTHVMELS AEASKEAALI NQEAWEKAQG ENSTTRP00000002930/1-310 ALDLLRELKE MTQKKDLELQ ---------- ---------- ---------- bmy_02578T0/1-337 ALDLLRELKE MTQEKDLELQ RSFTHVMELS AEASKEAALI NQEAWEKAQG 401 450 ENSBTAP00000044548/1-308 PEALSRWYFN PKEATDGETQ EEIRSPL--G HDEL------ ---------- ENSP00000253669/1-410 MAPPSRWYFN QDSACR-ESG GAPKNTPLSE DDNPGASSAP AQATFISPSE BACU016699/1-397 PKAPSQWYFN PEEAIGGETW GELRSLPLSG HDEP------ ---------- ENSTTRP00000002930/1-310 ---------- ---------- ---------- ---------- ---------- bmy_02578T0/1-337 PKAPSQWYFN PEEAIGGETQ GELRSLLLSG HDEP------ ---------- 451 500 ENSBTAP00000044548/1-308 ---------- ---------- -- ENSP00000253669/1-410 DFSSSSQAEV PPSLSRSGRD LS BACU016699/1-397 ---------- ---------- -- ENSTTRP00000002930/1-310 ---------- ---------- -- bmy_02578T0/1-337 ---------- ---------- --