KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:15 2014 Check: 00 .. Name: ENSBTAP00000044619/1-531 Len: 580 Check: 6835 Weight: 1.00 Name: ENSP00000320171/1-531 Len: 580 Check: 7418 Weight: 1.00 Name: bmy_10983T0/1-580 Len: 580 Check: 1465 Weight: 1.00 Name: ENSTTRP00000008979/1-531 Len: 580 Check: 7448 Weight: 1.00 // 1 50 ENSBTAP00000044619/1-531 MSKHHSDAGT AFIQTQQLHA AMADTFLEHM CRLDIDSPPI TARNTGIICT ENSP00000320171/1-531 MSKPHSEAGT AFIQTQQLHA AMADTFLEHM CRLDIDSPPI TARNTGIICT bmy_10983T0/1-580 MSKPHSDAGT AFIQTQQLHA AMADTFLEHM CRLDIDSPPI TARNTGIICT ENSTTRP00000008979/1-531 MSKPHSDAGT AFIQTQQLHA AMADTFLEHM CRLDIDSPPI TARNTGIICT 51 100 ENSBTAP00000044619/1-531 IGPASRAVET LKEMIKSGMN VARLNFSHGT HEYHAETIKN VREATESFAS ENSP00000320171/1-531 IGPASRSVET LKEMIKSGMN VARLNFSHGT HEYHAETIKN VRTATESFAS bmy_10983T0/1-580 IGPASRSVET LKEMIKSGMN VARLNFSHGT HEYHKETIKN VREATESFAS ENSTTRP00000008979/1-531 IGPASRSVET LKEMIKSGMN VARLNFSHGT HEYHKETIKN VREATESFAS 101 150 ENSBTAP00000044619/1-531 DPILYRPVAV ALDTKGPEIR TGLIKGSGTA EVELKKGATL KITLDNAYME ENSP00000320171/1-531 DPILYRPVAV ALDTKGPEIR TGLIKGSGTA EVELKKGATL KITLDNAYME bmy_10983T0/1-580 DPILYRPVAV ALDTKGPEIR TGLIKGSGTA EVELKKGAVL KITLDNAYME ENSTTRP00000008979/1-531 DPILYRPVAV ALDTKGPEIR TGLIKGSGTA EVELKKGATL KITLDNAYME 151 200 ENSBTAP00000044619/1-531 KCDENILWLD YKNICKVVDV GSKIYVDDGL ISLLVKQKGP DFLVTEVENG ENSP00000320171/1-531 KCDENILWLD YKNICKVVEV GSKIYVDDGL ISLQVKQKGA DFLVTEVENG bmy_10983T0/1-580 KCDENTLWLD YKNICKVVDV GSKIYVDDGL ISLQVKQKGP DFLVTEVENG ENSTTRP00000008979/1-531 KCDENTLWLD YKNICKVVDV GSKIYVDDGL ISLQVKQKGP DFLVTEVENG 201 250 ENSBTAP00000044619/1-531 GSLGSKKGVN LPGAAVDLPA VSEKDIQDLK FGVEQNVDMV FASFIRKASD ENSP00000320171/1-531 GSLGSKKGVN LPGAAVDLPA VSEKDIQDLK FGVEQDVDMV FASFIRKASD bmy_10983T0/1-580 GSLGSKKGVN LPGAAVDLPA VSEKDIQDLK FGVEQDVDMV FASFIRKASD ENSTTRP00000008979/1-531 GSLGSKKGVN LPGAAVDLPA VSEKDIQDLK FGVEQDVDMV FASFIRKASD 251 300 ENSBTAP00000044619/1-531 VHEVRKVLGE KGKNIKIISK IENHEGVRRF DEILEASDGI MVARGDLGIE ENSP00000320171/1-531 VHEVRKVLGE KGKNIKIISK IENHEGVRRF DEILEASDGI MVARGDLGIE bmy_10983T0/1-580 VHEVRKVLGE KGKNIKIISK IENHEGVRRF DEILEASDGI MVARGDLGIE ENSTTRP00000008979/1-531 VHAVRKVLGE KGKNIKIISK IENHEGVRRF DEILEASDGI MVARGDLGIE 301 350 ENSBTAP00000044619/1-531 IPAEKVFLAQ KMMIGRCNRA GKPVICATQM LESMIKKPRP TRAEGSDVAN ENSP00000320171/1-531 IPAEKVFLAQ KMMIGRCNRA GKPVICATQM LESMIKKPRP TRAEGSDVAN bmy_10983T0/1-580 IPAEKVFLAQ KMMIGRCNRA GKPVICATQM LESMIKKPRP TRAEGSDVAN ENSTTRP00000008979/1-531 IPAEKVFLAQ KMMIGRCNRA GKPVICATQM LESMIKKPRP TRAEGSDVAN 351 400 ENSBTAP00000044619/1-531 AVLDGADCIM LSGETAKGDY PLEAVRMQHL IAREAEAAIY HLQLFEELRR ENSP00000320171/1-531 AVLDGADCIM LSGETAKGDY PLEAVRMQHL IAREAEAAMF HRKLFEELVR bmy_10983T0/1-580 AVLDGADCIM LSGETAKGDY PLEAVRMQHL IAREAEAAMF HLKLFEELAR ENSTTRP00000008979/1-531 AVLDGADCIM LSGETAKGDY PLEAVRMQHL IAREAEAAMF HLKLFEELAR 401 450 ENSBTAP00000044619/1-531 LSPITSDPTE AAAVGAVEAS F--------- ---------- ---------- ENSP00000320171/1-531 ASSHSTDLME AMAMGSVEAS Y--------- ---------- ---------- bmy_10983T0/1-580 ASSHSTDLME AMAMGSVEAS YKCLAAALII AREAEAAIYH LQLFEELRRL ENSTTRP00000008979/1-531 ASSRSTDLME AMAMGSVEAS Y--------- ---------- ---------- 451 500 ENSBTAP00000044619/1-531 ---------- ---------- KCCSGAIIVL TKSGRSAHQV ARYRPRAPII ENSP00000320171/1-531 ---------- ---------- KCLAAALIVL TESGRSAHQV ARYRPRAPII bmy_10983T0/1-580 SPITSDPTEA AAVGAVEASF KCCSGAIIVL TKSGRSAHQV SRYRPRAPII ENSTTRP00000008979/1-531 ---------- ---------- KCLAAALIVL TESGRSAHQV SRYRPRAPII 501 550 ENSBTAP00000044619/1-531 AVTRNHQTAR QAHLYRGIFP VVCKDPVQEA WAEDVDLRVN LAMNVGKARG ENSP00000320171/1-531 AVTRNPQTAR QAHLYRGIFP VLCKDPVQEA WAEDVDLRVN FAMNVGKARG bmy_10983T0/1-580 AVTRNHQTAR QAHLYRGVFP VVCKDPVQDA WAEDVDLRVN LAMNVGKARG ENSTTRP00000008979/1-531 AVTRNHQTAR QAHLYRGIFP VVCKDPVQEA WAEDVDLRVN LAMNVGKARG 551 600 ENSBTAP00000044619/1-531 FFKKGDVVIV LTGWRPGSGF TNTMRVVPVP ENSP00000320171/1-531 FFKKGDVVIV LTGWRPGSGF TNTMRVVPVP bmy_10983T0/1-580 FFKKGDVVIV LTGWRPGSGF TNTMRVVPVP ENSTTRP00000008979/1-531 FFKKGDVVIV LTGWRPGSGF TNTMRVVPVP