KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:15 2014 Check: 00 .. Name: ENSP00000362298/1-568 Len: 577 Check: 197 Weight: 1.00 Name: ENSBTAP00000044620/1-568 Len: 577 Check: 2439 Weight: 1.00 Name: ENSTTRP00000007164/1-406 Len: 577 Check: 3458 Weight: 1.00 Name: bmy_16719T0/1-565 Len: 577 Check: 1588 Weight: 1.00 Name: BACU001928/1-378 Len: 577 Check: 5352 Weight: 1.00 // 1 50 ENSP00000362298/1-568 ---------M PSTDLLMLKA FEPYLEILEV YSTKAKNYVN GHCTKYEPWQ ENSBTAP00000044620/1-568 ---------M PSADLMSLKA FEPYFEILEV YSTKAKNYVN GHCTKYEPWQ ENSTTRP00000007164/1-406 ---------- ---------- ---------- ---------- ---------- bmy_16719T0/1-565 MLDENLMGEI NSHELGILKA FEPYFEILEV YSTKAKNYVN GHCTKYEPWQ BACU001928/1-378 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362298/1-568 LIAWSVVWTL LIVWGYEFVF QPESLWSRFK KKCFKLTRKM PIIGRKIQDK ENSBTAP00000044620/1-568 LIVWSVVWTL LIVWVYEFVF QPESLWSRFK KRCFKLIRKM PIIGRKIQDK ENSTTRP00000007164/1-406 ---------- ---------- ---------- ---------- ---------- bmy_16719T0/1-565 LIAWSVVWTL LIVWVYEFVF QPESLWSRFK KRCFKLIRKM PIIGRKIQDK BACU001928/1-378 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000362298/1-568 LNKTKDDISK NMSFLKVDKE YVKALPSQGL SSSAVLEKLK EYSSMDAFWQ ENSBTAP00000044620/1-568 LNKTKEDISK SMTFLKVDQD YVKALPSQGL SPAAVLEKLK EYSSKDVLWQ ENSTTRP00000007164/1-406 ---------- ---------- ---------- ---------- ---------- bmy_16719T0/1-565 LNKTKEDISK NMSFLKVDKD YVKALPSQGM SPAAVLEKLK EYSSMDVLWQ BACU001928/1-378 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000362298/1-568 EGRASGTVYS GEEKLTELLV KAYGDFAWSN PLHPDIFPGL RKIEAEIVRI ENSBTAP00000044620/1-568 EGKASGAVYS GEKELTDLLV KAYGDFAWSN PLHPDIFPGL RKIEAEIVRM ENSTTRP00000007164/1-406 ---------- ---------- -AYGDFAWSN PLHPDIFPGL RKIEAEIVRM bmy_16719T0/1-565 EGKASGAVYS GEKELTELLV KAYGDFAWSN PLHPDIFPGL RKIEAEIVRM BACU001928/1-378 ---------- ---------- ---------- ---------- ---------M 201 250 ENSP00000362298/1-568 ACSLFNGGPD SCGCVTSGGT ESILMACKAY RDLAFEKGIK TPEIVAPQSA ENSBTAP00000044620/1-568 ACSLFNGGPD SCGCVTSGGT ESILMACKAY RELAFENGIK TPEIVAPQSA ENSTTRP00000007164/1-406 ACSLFSGGPD SCGCVTSGGT ESILMACKAY RELAFENGIK TPEIVAPQSA bmy_16719T0/1-565 ACSLFSGGPD SCGCVTSGGT ESILMACSLL VH-------- ----VAPQSA BACU001928/1-378 ACSLFSGGPD SCGCVTSGGT ESILMACKAY RELAFENGIK TPEIVAPQSA 251 300 ENSP00000362298/1-568 HAAFNKAASY FGMKIVRVPL TKMMEVDVRA MRRAISRNTA MLVCSTPQFP ENSBTAP00000044620/1-568 HAAFDKAASY FGMKIIRVPL NKMMEVDVRA MRRAISRNTA MLVCSAPQFP ENSTTRP00000007164/1-406 HAAFDKAANY FGMKIKRVPL NKMMEVDVQA MRRAISRNTA MLVCSAPQFP bmy_16719T0/1-565 HAAFDKAANY FGMKIKRVPL NKVMEVDVRA MERAISRNTA MLVCSAPQFP BACU001928/1-378 HAAFDKAANY FGMKIKRVPL NKVMEVDVRA MRRAISRNTA MLVCSAPQFP 301 350 ENSP00000362298/1-568 HGVIDPVPEV AKLAVKYKIP LHVDACLGGF LIVFMEKAGY PLEHPFDFRV ENSBTAP00000044620/1-568 HGVIDPIPEV AKLAVKYKIP LHVDACLGGF LIVFMEKAGY PLEQPFDFRV ENSTTRP00000007164/1-406 HGVIDPVPEV AKLAVKYKIP LHVDACLGGF LIVFMEKAGY PLEHPFDFRV bmy_16719T0/1-565 HGVIDPVPDV AKLAVKYKIP LHVDACLGGF LIVFMEKAGY PLEQPFDFRV BACU001928/1-378 HGVIDPVPDV AKLAVKYKIP LHVDACLGGF LIVFMEKAGY PLEQPFDFRV 351 400 ENSP00000362298/1-568 KGVTSISADT HKYGYAPKGS SLVLYSDKKY RNYQFFVDTD WQGGIYASPT ENSBTAP00000044620/1-568 KGVTSISADT HKYGYAPKGS SVLLYSDKKY RSYQFFVATD WQGGIYASPT ENSTTRP00000007164/1-406 KGVTSISADT HKYGYAPKGS SVVLYSDKKY RHYQFFVDTD WQGGIYASPT bmy_16719T0/1-565 KGVTSISADT HKYGYAPKGS SVVLYSDKKY RHYQFFVDTD WQGGIYASPT BACU001928/1-378 KGVTSISADT HKYGYAPKGS SVVLYSDKKY RHYQFFVDTD WQGGIYASPT 401 450 ENSP00000362298/1-568 IAGSRPGGIS AACWAALMHF GENGYVEATK QIIKTARFLK SELENIKGIF ENSBTAP00000044620/1-568 IAGSRPGGIS AACWASLMYF GESGYVEATK QIIKTTRFLK SELENIKGIF ENSTTRP00000007164/1-406 IAGSRPGGIS AACWAALMYF GESGYVEATK QIIKTTRFLK SELENIKGIF bmy_16719T0/1-565 IAGSRPGGIS AACWAALMYF GESGYVEATK QIIKTTRFLK SELENIKGIF BACU001928/1-378 IAGSRPGGIS AACWAALMYF GESGYVEATK QIIKTTRFLK SELENIKGIF 451 500 ENSP00000362298/1-568 VFGNPQLSVI ALGSRDFDIY RLSNLMTAKG WNLNQLQFPP SIHFCITLLH ENSBTAP00000044620/1-568 VFGNPQLSVI ALGSRDFDIY RLFNLMNAKG WNLNQLQFPP SLHFCITLVH ENSTTRP00000007164/1-406 VFGNPQLSVI ALGSHDFDIY RLFNLMNAKG WSLNQLQFTP SIHFCITLVH bmy_16719T0/1-565 VFGNPQLSVI ALGSHDFDIY RLFNLMNAKG WSLNQLQFPP SIHFCITLVH BACU001928/1-378 VFGNPQLSVI ALGSHDFDIY RLFNLMNAKG WSLNQLQFPP SIHFCITLVH 501 550 ENSP00000362298/1-568 ARKRVAIQFL KDIRESVTQI MKNPKAKTTG MGAIYGMAQT TVDRNMVAEL ENSBTAP00000044620/1-568 TRKRVAIQFL KDIRESVTQI MKNPKAKTTG MGAIYGMAQA TIDRNLVAEL ENSTTRP00000007164/1-406 TRKQVATQFL KDIRESVTQI MKNPKAKTTG MGAIYGMAQA TVDRNLVAEL bmy_16719T0/1-565 TRKRVAIQFL KDIRESVTQI MKNPKAKTTG MGAIYGMAQA TVDRNLVAEL BACU001928/1-378 TRKRVAIQFL KDIRESVTQI MKNPKAKTTG MGAIYGMAQA TVDRNLVAEL 551 600 ENSP00000362298/1-568 SSVFLDSLYS TDTVTQGSQM NGSPKPH ENSBTAP00000044620/1-568 SSVFLDSLFS TDTTTQGSQM NGSPKPR ENSTTRP00000007164/1-406 SSVFLDSLFS TDTVTQGSQM NGSPKPR bmy_16719T0/1-565 SSVFLDSLFS TDTVTQGSQM NGSPKPR BACU001928/1-378 SSVFLDSLFS TDTVTQGSQM NGSPKPR