KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:18 2014 Check: 00 .. Name: ENSTTRP00000004568/1-386 Len: 442 Check: 9375 Weight: 1.00 Name: ENSP00000262178/1-438 Len: 442 Check: 7593 Weight: 1.00 Name: ENSBTAP00000044668/1-441 Len: 442 Check: 183 Weight: 1.00 Name: bmy_17385T0/1-334 Len: 442 Check: 7510 Weight: 1.00 Name: BACU000758/1-421 Len: 442 Check: 7792 Weight: 1.00 // 1 50 ENSTTRP00000004568/1-386 ---------- ---------- ---------- ---------- ---------- ENSP00000262178/1-438 MRTLLPPALL TCW---LLAP VNSIHPECRF HLEIQEEETK CAELLRSQTE ENSBTAP00000044668/1-441 ILTFKVLTCS YCWEMLFLVR VSSVHPECRF HLEIQEEETR CAELLSTQTE bmy_17385T0/1-334 ---------- ---------- ---------- ---------- ---------- BACU000758/1-421 ---------- ---------- MPXXXXXCRF HLEIQEEETR CAEILRAQTE 51 100 ENSTTRP00000004568/1-386 ----CSGVWD NITCWLPADV GETVTVPCPK LFSNFYSKPG NISKNCTRDG ENSP00000262178/1-438 KHKACSGVWD NITCWRPANV GETVTVPCPK VFSNFYSKAG NISKNCTSDG ENSBTAP00000044668/1-441 KHKACSGIWD NITCWRPADV GETVTVPCPK LFSNFYSKPG NISKNCTSDG bmy_17385T0/1-334 ---------- ---------- -----MPATR SLQMHF---- ---------- BACU000758/1-421 NYKACSGVWD NITCWLPADV GETVTVPCPK LFSNFYSKPG NISKNCTSDG 101 150 ENSTTRP00000004568/1-386 WSETFPDFMD ACGYNDPEDE SKITFYILVK AIYTLGYSVS LISLTTGSII ENSP00000262178/1-438 WSETFPDFVD ACGYSDPEDE SKITFYILVK AIYTLGYSVS LMSLATGSII ENSBTAP00000044668/1-441 WSETFPDFMD ACGYSDPEDE SKITFYILVK AIYTLGYSVS LISLTTGSII bmy_17385T0/1-334 -----PLF-- ---------- -QITFYILVK AIYTLGYSVS LISLTTGSII BACU000758/1-421 WSETFPDFMD ACGYSDPEDE SKITFYILVK AIYTLGYSVS LISLTTGSII 151 200 ENSTTRP00000004568/1-386 LCLFRKLHCT RNYIHLNLFL SFILRAISVL VKDDVLYSSS GTLHCPDQPS ENSP00000262178/1-438 LCLFRKLHCT RNYIHLNLFL SFILRAISVL VKDDVLYSSS GTLHCPDQPS ENSBTAP00000044668/1-441 LCLFRKLHCT RNYIHLNLFL SFILRAVSVL VKDDVLYSSS GMLHCLDLPS bmy_17385T0/1-334 LCLFRKLHCT RNYIHLNLFL SFILRAISVL VKDDVLYSSS GTLHCPDQPS BACU000758/1-421 LCLFRKLHCT RNYIHLNLFL SFILRAISVL VKDDVLYSSS GTLHCPDQPS 201 250 ENSTTRP00000004568/1-386 SWXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262178/1-438 SWVGCKLSLV FLQYCIMANF FWLLVEGLYL HTLLVAMLPP RRCFLAYLLI ENSBTAP00000044668/1-441 SWVGCKLSLV FFQYCIMANF YWLLVEGLYL HTLLAVIFAP GRRFRAYLLI bmy_17385T0/1-334 SWVGCKLSLV FFQYCIMANF YWLLVEGLYL HTLLVAIFSP SRRFVAYLLI BACU000758/1-421 SWVGCKLSLV FFQYCIMANF YWLLVEGLYL HTLLVAIFSP SRRFVAYLLI 251 300 ENSTTRP00000004568/1-386 XXXIPTVCTG AWTAARLSLE DTGXXXXXXX XXXXXXXXXX XXXXXXVNFI ENSP00000262178/1-438 GWGLPTVCIG AWTAARLYLE DTGCWDTNDH SVPWWVIRIP ILISIIVNFV ENSBTAP00000044668/1-441 GWGIPTVCTG AWTVARLLLE DTGCWDTNDH SVPWWVIRTP ILISIIVNFI bmy_17385T0/1-334 GWGIPTVCTG AWTAARLSLE DTGCWDTNDH SVPWWVIRTP ILISIIVNFI BACU000758/1-421 GWGIPTVCTG AWTAARLSLE DTGCWDTNDH SVPWWVIRTP ILISIIVNFI 301 350 ENSTTRP00000004568/1-386 LFVSIIRILL QKLTSPDVGG NDQSQYKRLT KSTLLLIPLF GVHYMLFAVF ENSP00000262178/1-438 LFISIIRILL QKLTSPDVGG NDQSQYKRLA KSTLLLIPLF GVHYMVFAVF ENSBTAP00000044668/1-441 LFVSIIRILL QKLTSPDVGG NDQSQYKRLA KSTLLLIPLF GVHYMVFAVF bmy_17385T0/1-334 LFVSIIRILL QKLTSPDVGG NDQSQYKRLA KSTLLLVPLF GVHYVVFAVL BACU000758/1-421 LFVSIIRILL QKLTSPDVGG NDQSQYKRLA KSTLLLVPLF GVHYVVFAVL 351 400 ENSTTRP00000004568/1-386 PIGISSKYQI LFELCIGSFQ GLVVAVLYCF LNSEVQSELG RMWRPTLCPS ENSP00000262178/1-438 PISISSKYQI LFELCLGSFQ GLVVAVLYCF LNSEVQCELK RKWRSR-CPT ENSBTAP00000044668/1-441 PIRISSKYQI LFELCLGSFQ GLVVAVLYCF LNSEVQSELR RTWRGL-WPS bmy_17385T0/1-334 PIGISSKYQI LFELCIGSFQ GLVVAVLYCF LNSEVQSELR RVGRSP-CPS BACU000758/1-421 PIGISSKYQI LFELCIGSFQ GLVVAVLYCF LNSEVQSELR RVGRSL-CPS 401 450 ENSTTRP00000004568/1-386 RSSGRDCS-H SLSGSRNGSE GTMQV-RSSR AVSVLQTETS VI ENSP00000262178/1-438 PSASRDYRVC GSSFSRNGSE GALQFHRGSR AQSFLQTETS VI ENSBTAP00000044668/1-441 RPSARDYRLH SSSISRTGSD GALQGPRGSR APSLLQTETS VI bmy_17385T0/1-334 RPSGRDYRLH SSSISRNGSE GTLHVPRGSR ALSFLQTETS VI BACU000758/1-421 RPSGRDYRLH SSSISRNGSE GTLHVPRGSR ALSFLQTETS VI