KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:19 2014 Check: 00 .. Name: BACU010198/1-111 Len: 368 Check: 6016 Weight: 1.00 Name: ENSTTRP00000000182/1-210 Len: 368 Check: 3486 Weight: 1.00 Name: ENSP00000432816/1-265 Len: 368 Check: 9602 Weight: 1.00 Name: bmy_08510T0/1-341 Len: 368 Check: 3316 Weight: 1.00 Name: ENSBTAP00000044695/1-273 Len: 368 Check: 7609 Weight: 1.00 // 1 50 BACU010198/1-111 MDKFLLL--- -LLGVLP--- ---------- ---------- ---------- ENSTTRP00000000182/1-210 MKKCLLLVSL YLLGSAR--- ---------- ---------G ASGQSDELPG ENSP00000432816/1-265 MNRFLLLMSL YLLGSAR--- ---------- ---------G TSSQPNELSG bmy_08510T0/1-341 MKKFLLLVSL YLLGSARGSV KQMRWSLCFL NNPVLHGLPG ASGQPVELPG ENSBTAP00000044695/1-273 MKNFLLLVSL CFLGSAR--- ---------- ---------A ASAQSDEFLG 51 100 BACU010198/1-111 ---------- -----FVLFQ GVASDTL--- ---------- ---------- ENSTTRP00000000182/1-210 SLDHQASVQQ PSGDYFSLEN PSDGEALYET SSGENTLSEH GSSE------ ENSP00000432816/1-265 SIDHQTSVQQ LPGEFFSLEN PSDAEALYET SSGLNTLSEH GSSE-----H bmy_08510T0/1-341 SMDHQASVQQ HSGDYFSLAN PSDGEALYET SSGESTLSEH GSSEHTAVEH ENSBTAP00000044695/1-273 SMDHQASVQQ LSSDYFSLAN PLD-EVLYET SSIDNTLSER GSSETAAAQH 101 150 BACU010198/1-111 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000182/1-210 ----HTAVEH TSSE------ ---------- ---------- ---------- ENSP00000432816/1-265 GSSKHTVAEH TSGE------ ---------- ---------- ---------- bmy_08510T0/1-341 ASGEHDAVEH SSGEHAAVKH ASGEHAAVEQ ASSEHAAVEQ ASSEHAAVEQ ENSBTAP00000044695/1-273 ASGEPLAVEH ASGP------ ---------- ---------- ---------- 151 200 BACU010198/1-111 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000182/1-210 ---------- ---------- ---------- ----HAAGGH AAGEHASSEQ ENSP00000432816/1-265 ---------- ---------- ---------H AESEHASGEP AATEHAEGEH bmy_08510T0/1-341 ASSEHAAVEH ASSEHAAVEH ASSEHAAVEQ ASSEHAAGEH APDEHASSEQ ENSBTAP00000044695/1-273 ---------- -----TPVDH AT----AVEH APGEAAAGEH TLNEHTPGEQ 201 250 BACU010198/1-111 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000182/1-210 PSGEQPSGEK TSGER----- ---------- ---------- ---------- ENSP00000432816/1-265 TVGEQPSGEQ PSGEHLSGEQ PLSELESGEQ PSDEQPSGEH GSGEQPSGEQ bmy_08510T0/1-341 PSGEQPSGEK PSGEQLTGEQ PAGEQVASEE VASEKPSGEQ PAGEQVSAEQ ENSBTAP00000044695/1-273 LSVEQPIGEQ PLGEQSVGEQ AVGEQPTNEQ VASDKPAGEQ SAVEPISAEQ 251 300 BACU010198/1-111 ---------- ---------- ---------- -CMICQNFK- KGQCLRGKGN ENSTTRP00000000182/1-210 ---------- PAGEQPSGIP PSSTISXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000432816/1-265 ASGEQPSGEH ASGEQASGAP ISSTSTGTIL NCYTCAYMND QGKCLRGEGT bmy_08510T0/1-341 VSGEKSPGEQ PSGEQPSGIP PSSTISGPVL NCHTCSYMND QGKCLRGEGV ENSBTAP00000044695/1-273 VSAE------ SSAEQPSELP PSSTFSGPPL SCHTCSYMND QGKCLRGEGV 301 350 BACU010198/1-111 CTMEQGPGCR TRDFFIFSEK DGWRYNHTEL DCYDYCSSSN FYFGDLKIST ENSTTRP00000000182/1-210 XXXXXXXXXX XXXXX----- XXGKLQFIVQ GCESMCPSMN QLSRGTRMQV ENSP00000432816/1-265 CITQNSQQCM LKKIF----- EGGKLQFMVQ GCENMCPSMN LFSHGTRMQI bmy_08510T0/1-341 CSTQNSQQCM LKKIF----- ---------E GCK------- LYAVGINLSA ENSBTAP00000044695/1-273 CSTQNSQQCM LKKIF----- EGGKLQFMVQ GCENMCPSMN LFSHGTRMQI 351 400 BACU010198/1-111 FCCKGRDFCN KYYGKGKE ENSTTRP00000000182/1-210 ICCRNQSFCN KV------ ENSP00000432816/1-265 ICCRNQSFCN KI------ bmy_08510T0/1-341 TRSRSLCPCF LL------ ENSBTAP00000044695/1-273 ICCRNQSFCN KI------