KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:56:20 2014 Check: 00 ..
Name: ENSTTRP00000001037/1-956 Len: 958 Check: 55 Weight: 1.00
Name: ENSP00000402584/1-955 Len: 958 Check: 3201 Weight: 1.00
Name: ENSBTAP00000044710/1-955 Len: 958 Check: 4911 Weight: 1.00
Name: bmy_05877T0/1-954 Len: 958 Check: 8167 Weight: 1.00
Name: BACU018017/1-925 Len: 958 Check: 5973 Weight: 1.00
//
1 50
ENSTTRP00000001037/1-956 -MEVTCLLLL ALIPLHCQGQ GVYAPAQAQI VHAGQACVVK EDNISERVYT
ENSP00000402584/1-955 -MEVTCLLLL ALIPFHCRGQ GVYAPAQAQI VHAGQACVVK EDNISERVYT
ENSBTAP00000044710/1-955 -MEVTCLLLL ALIPFHCRGQ GVYAPAQAQI MHAGQACVVK EDNISERVYT
bmy_05877T0/1-954 EGALDALWPR CLLSKPPRLP P--APAQAQI VHAGQACVVK EDNISERVYT
BACU018017/1-925 ---------- ---------- ---APAQAQI VHAGQACVVK EDNISERVYT
51 100
ENSTTRP00000001037/1-956 IREGDTLVLQ CLVTGHPRPQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000402584/1-955 IREGDTLMLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLRIERIA
ENSBTAP00000044710/1-955 IREGDTLVLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLRIERIA
bmy_05877T0/1-954 IREGDTLVLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLRIERIA
BACU018017/1-925 IREGDTLVLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLCIERIA
101 150
ENSTTRP00000001037/1-956 XXXXXXXXXX XENGVRVPAI KSPRVDVQYL DEPVLTVHQT VSDVRGNFYQ
ENSP00000402584/1-955 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPMLTVHQT VSDVRGNFYQ
ENSBTAP00000044710/1-955 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPVLTVHQT VSDVRGNFYQ
bmy_05877T0/1-954 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPVLTVHQT VSDVRGNFYQ
BACU018017/1-925 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPVLTVHQT VSDVRGNFYQ
151 200
ENSTTRP00000001037/1-956 EKTVFLRCTV NSNPPARFIW KRGLDTLSHS QDNGVDIYEP LYTQGETKVL
ENSP00000402584/1-955 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL
ENSBTAP00000044710/1-955 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL
bmy_05877T0/1-954 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL
BACU018017/1-925 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL
201 250
ENSTTRP00000001037/1-956 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAV TFWLTNTTAP PALKLSVNET
ENSP00000402584/1-955 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAI TFRLTNTTAP PALKLSVNET
ENSBTAP00000044710/1-955 KLKNLRPQDY ASYSCQVSVR NVCGIPDKAV SFQLTNTTAP PALKLSVNET
bmy_05877T0/1-954 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAV TFRLTNTTAP PALKLSVNET
BACU018017/1-925 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAV TFRLTNTTAP PALKLSVNET
251 300
ENSTTRP00000001037/1-956 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ
ENSP00000402584/1-955 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ
ENSBTAP00000044710/1-955 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ
bmy_05877T0/1-954 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ
BACU018017/1-925 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ
301 350
ENSTTRP00000001037/1-956 AQDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL
ENSP00000402584/1-955 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL
ENSBTAP00000044710/1-955 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL
bmy_05877T0/1-954 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL
BACU018017/1-925 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL
351 400
ENSTTRP00000001037/1-956 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS
ENSP00000402584/1-955 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS
ENSBTAP00000044710/1-955 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS
bmy_05877T0/1-954 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS
BACU018017/1-925 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLLTRN DPELPAVTSS
401 450
ENSTTRP00000001037/1-956 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGKA
ENSP00000402584/1-955 LELIDLHFSD YGTYLCMASF PGAPVPDLSV EVNISSETVP PTISVPKGRA
ENSBTAP00000044710/1-955 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGRA
bmy_05877T0/1-954 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGRA
BACU018017/1-925 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGRA
451 500
ENSTTRP00000001037/1-956 VVTVREGSPA ELHCEVRGKP RPPVLWSRVD KDAALLPSGL PL-ETSDGKL
ENSP00000402584/1-955 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KEAALLPSGL PLEETPDGKL
ENSBTAP00000044710/1-955 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KEAALLPSGL PLEETPDGKL
bmy_05877T0/1-954 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KDAALLPSGL TLEETSDGKL
BACU018017/1-925 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KDAALLPSGL PLEETSDGKL
501 550
ENSTTRP00000001037/1-956 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQXXX XXXXXXXXXX
ENSP00000402584/1-955 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQFPP EVEPSSQDVR
ENSBTAP00000044710/1-955 RLERVSRDMS GTYRCQTARY NGFNVRQREA QVQLNVQFPP EVEPGSQDVR
bmy_05877T0/1-954 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQFPP EVEPSSQDVR
BACU018017/1-925 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQFPP EVEPSSQDVR
551 600
ENSTTRP00000001037/1-956 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VLVAAEAPEH
ENSP00000402584/1-955 QALGRPVLLR CSLLRGSPQR IASAV--WRF KGQLLPPPPV VPAAAEAPDH
ENSBTAP00000044710/1-955 QALGRPVLLR CSLLRGSPQR IASAV--WRF KGQLLPPPPA VPVAAEAPDH
bmy_05877T0/1-954 QALGRPVLLR CSLLRGSPQR ISSAV--WRF KGQLLPPPPA VPVAAEAPDH
BACU018017/1-925 QALGRPVLLR CSLLRGSPQR ISSAV--WRF KGQLLPPPPA VPVAAEAPDH
601 650
ENSTTRP00000001037/1-956 SELRLDAVTR DSSGSYECSI SNDVGSAACL FQVSAKAYSP EFYFDTPNPT
ENSP00000402584/1-955 AELRLDAVTR DSSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPNPT
ENSBTAP00000044710/1-955 SELRLDAVTR ESSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPNPT
bmy_05877T0/1-954 SELRLDAVTR DSSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPNPT
BACU018017/1-925 SELRLDAVTR DSSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPKPT
651 700
ENSTTRP00000001037/1-956 RSHKLSKNYS YVLQWTQREP DAVDPLLNYR LSVRQLNQQN AMVKAIPVRR
ENSP00000402584/1-955 RSHKLSKNYS YVLQWTQREP DAVDPVLNYR LSIRQLNQHN AVVKAIPVRR
ENSBTAP00000044710/1-955 RSHKLSKNYS YVLQWTQREP DAVDPVLNYR LSVRQLNQHN ALVKAIPVRR
bmy_05877T0/1-954 RSHKLSKNYS YVLQWTQREP DAVDPVLNYR LSVRQLNQQN AMVKAIPVRH
BACU018017/1-925 RSHKLSKNYS YVLQWTQREP DAVDPLLNYR LSVRQLNQQN AMVRAIPVRR
701 750
ENSTTRP00000001037/1-956 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDTASRII HYTEPINSPN
ENSP00000402584/1-955 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDMASRII HYTEPINSPN
ENSBTAP00000044710/1-955 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDMASRII HYTEPISSPN
bmy_05877T0/1-954 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDTASRII HYTEPINSPN
BACU018017/1-925 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDTASRII HYTE------
751 800
ENSTTRP00000001037/1-956 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG
ENSP00000402584/1-955 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG
ENSBTAP00000044710/1-955 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG
bmy_05877T0/1-954 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG
BACU018017/1-925 --HNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG
801 850
ENSTTRP00000001037/1-956 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS
ENSP00000402584/1-955 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS
ENSBTAP00000044710/1-955 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS
bmy_05877T0/1-954 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS
BACU018017/1-925 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS
851 900
ENSTTRP00000001037/1-956 LNLLVRSRNK GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG
ENSP00000402584/1-955 LNLLVRSRNK GALDTHAWSL SGNKGNVWQQ AHVPISPSGP FQIIFEGVRG
ENSBTAP00000044710/1-955 LNLLVRSRSK GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG
bmy_05877T0/1-954 LNLLVRSRNR GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG
BACU018017/1-925 LNLLVRSRNR GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG
901 950
ENSTTRP00000001037/1-956 SGYLGDIAID DVTLKKGECP RKQMDPNKVV VMPGSGAPWQ SRPQLWGPMA
ENSP00000402584/1-955 PGYLGDIAID DVTLKKGECP RKQTDPNKVV VMPGSGAPCQ SSPQLWGPMA
ENSBTAP00000044710/1-955 SGYLGDIAID DVTLKKGECP RKQMDPNKVV VMPGSGAPRQ PLPQLWGPVA
bmy_05877T0/1-954 SGYLGDIAID DVTLQKGECP RKQMDPNKVV VMPGSGAAWQ PRPQLWGPVA
BACU018017/1-925 SGYLGDIAID DVTLKKGECP RKQMDPNKVV VMPGSGAPWQ PRPQLWGPVA
951 1000
ENSTTRP00000001037/1-956 IFLLALQR
ENSP00000402584/1-955 IFLLALQR
ENSBTAP00000044710/1-955 TFLLALQR
bmy_05877T0/1-954 IFLLALQR
BACU018017/1-925 IFLLALQR