KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:20 2014 Check: 00 .. Name: ENSTTRP00000001037/1-956 Len: 958 Check: 55 Weight: 1.00 Name: ENSP00000402584/1-955 Len: 958 Check: 3201 Weight: 1.00 Name: ENSBTAP00000044710/1-955 Len: 958 Check: 4911 Weight: 1.00 Name: bmy_05877T0/1-954 Len: 958 Check: 8167 Weight: 1.00 Name: BACU018017/1-925 Len: 958 Check: 5973 Weight: 1.00 // 1 50 ENSTTRP00000001037/1-956 -MEVTCLLLL ALIPLHCQGQ GVYAPAQAQI VHAGQACVVK EDNISERVYT ENSP00000402584/1-955 -MEVTCLLLL ALIPFHCRGQ GVYAPAQAQI VHAGQACVVK EDNISERVYT ENSBTAP00000044710/1-955 -MEVTCLLLL ALIPFHCRGQ GVYAPAQAQI MHAGQACVVK EDNISERVYT bmy_05877T0/1-954 EGALDALWPR CLLSKPPRLP P--APAQAQI VHAGQACVVK EDNISERVYT BACU018017/1-925 ---------- ---------- ---APAQAQI VHAGQACVVK EDNISERVYT 51 100 ENSTTRP00000001037/1-956 IREGDTLVLQ CLVTGHPRPQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000402584/1-955 IREGDTLMLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLRIERIA ENSBTAP00000044710/1-955 IREGDTLVLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLRIERIA bmy_05877T0/1-954 IREGDTLVLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLRIERIA BACU018017/1-925 IREGDTLVLQ CLVTGHPRPQ VRWTKTAGSA SDKFQETSVF NETLCIERIA 101 150 ENSTTRP00000001037/1-956 XXXXXXXXXX XENGVRVPAI KSPRVDVQYL DEPVLTVHQT VSDVRGNFYQ ENSP00000402584/1-955 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPMLTVHQT VSDVRGNFYQ ENSBTAP00000044710/1-955 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPVLTVHQT VSDVRGNFYQ bmy_05877T0/1-954 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPVLTVHQT VSDVRGNFYQ BACU018017/1-925 RTQGGRYYCK AENGVGVPAI KSIRVDVQYL DEPVLTVHQT VSDVRGNFYQ 151 200 ENSTTRP00000001037/1-956 EKTVFLRCTV NSNPPARFIW KRGLDTLSHS QDNGVDIYEP LYTQGETKVL ENSP00000402584/1-955 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL ENSBTAP00000044710/1-955 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL bmy_05877T0/1-954 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL BACU018017/1-925 EKTVFLRCTV NSNPPARFIW KRGSDTLSHS QDNGVDIYEP LYTQGETKVL 201 250 ENSTTRP00000001037/1-956 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAV TFWLTNTTAP PALKLSVNET ENSP00000402584/1-955 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAI TFRLTNTTAP PALKLSVNET ENSBTAP00000044710/1-955 KLKNLRPQDY ASYSCQVSVR NVCGIPDKAV SFQLTNTTAP PALKLSVNET bmy_05877T0/1-954 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAV TFRLTNTTAP PALKLSVNET BACU018017/1-925 KLKNLRPQDY ASYTCQVSVR NVCGIPDKAV TFRLTNTTAP PALKLSVNET 251 300 ENSTTRP00000001037/1-956 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ ENSP00000402584/1-955 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ ENSBTAP00000044710/1-955 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ bmy_05877T0/1-954 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ BACU018017/1-925 LVVNPGENVT VQCLLTGGDP LPQLQWSHGP GPLPLGALAQ GGTLSIPSVQ 301 350 ENSTTRP00000001037/1-956 AQDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL ENSP00000402584/1-955 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL ENSBTAP00000044710/1-955 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL bmy_05877T0/1-954 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL BACU018017/1-925 ARDSGYYNCT ATNNVGNPAK KTVNLLVRSM KNATFQITPD VIKESENIQL 351 400 ENSTTRP00000001037/1-956 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS ENSP00000402584/1-955 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS ENSBTAP00000044710/1-955 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS bmy_05877T0/1-954 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLVTRN DPELPAVTSS BACU018017/1-925 GQDLKLSCHV DAVPQEKVTY QWFKNGKPAR MSKRLLLTRN DPELPAVTSS 401 450 ENSTTRP00000001037/1-956 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGKA ENSP00000402584/1-955 LELIDLHFSD YGTYLCMASF PGAPVPDLSV EVNISSETVP PTISVPKGRA ENSBTAP00000044710/1-955 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGRA bmy_05877T0/1-954 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGRA BACU018017/1-925 LELIDLHFSD YGTYLCVASF PGAPVPDLSV EVNISSETVP PTISVPKGRA 451 500 ENSTTRP00000001037/1-956 VVTVREGSPA ELHCEVRGKP RPPVLWSRVD KDAALLPSGL PL-ETSDGKL ENSP00000402584/1-955 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KEAALLPSGL PLEETPDGKL ENSBTAP00000044710/1-955 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KEAALLPSGL PLEETPDGKL bmy_05877T0/1-954 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KDAALLPSGL TLEETSDGKL BACU018017/1-925 VVTVREGSPA ELQCEVRGKP RPPVLWSRVD KDAALLPSGL PLEETSDGKL 501 550 ENSTTRP00000001037/1-956 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQXXX XXXXXXXXXX ENSP00000402584/1-955 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQFPP EVEPSSQDVR ENSBTAP00000044710/1-955 RLERVSRDMS GTYRCQTARY NGFNVRQREA QVQLNVQFPP EVEPGSQDVR bmy_05877T0/1-954 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQFPP EVEPSSQDVR BACU018017/1-925 RLERVSRDMS GTYRCQTARY NGFNVRPREA QVQLNVQFPP EVEPSSQDVR 551 600 ENSTTRP00000001037/1-956 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VLVAAEAPEH ENSP00000402584/1-955 QALGRPVLLR CSLLRGSPQR IASAV--WRF KGQLLPPPPV VPAAAEAPDH ENSBTAP00000044710/1-955 QALGRPVLLR CSLLRGSPQR IASAV--WRF KGQLLPPPPA VPVAAEAPDH bmy_05877T0/1-954 QALGRPVLLR CSLLRGSPQR ISSAV--WRF KGQLLPPPPA VPVAAEAPDH BACU018017/1-925 QALGRPVLLR CSLLRGSPQR ISSAV--WRF KGQLLPPPPA VPVAAEAPDH 601 650 ENSTTRP00000001037/1-956 SELRLDAVTR DSSGSYECSI SNDVGSAACL FQVSAKAYSP EFYFDTPNPT ENSP00000402584/1-955 AELRLDAVTR DSSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPNPT ENSBTAP00000044710/1-955 SELRLDAVTR ESSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPNPT bmy_05877T0/1-954 SELRLDAVTR DSSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPNPT BACU018017/1-925 SELRLDAVTR DSSGSYECSV SNDVGSAACL FQVSAKAYSP EFYFDTPKPT 651 700 ENSTTRP00000001037/1-956 RSHKLSKNYS YVLQWTQREP DAVDPLLNYR LSVRQLNQQN AMVKAIPVRR ENSP00000402584/1-955 RSHKLSKNYS YVLQWTQREP DAVDPVLNYR LSIRQLNQHN AVVKAIPVRR ENSBTAP00000044710/1-955 RSHKLSKNYS YVLQWTQREP DAVDPVLNYR LSVRQLNQHN ALVKAIPVRR bmy_05877T0/1-954 RSHKLSKNYS YVLQWTQREP DAVDPVLNYR LSVRQLNQQN AMVKAIPVRH BACU018017/1-925 RSHKLSKNYS YVLQWTQREP DAVDPLLNYR LSVRQLNQQN AMVRAIPVRR 701 750 ENSTTRP00000001037/1-956 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDTASRII HYTEPINSPN ENSP00000402584/1-955 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDMASRII HYTEPINSPN ENSBTAP00000044710/1-955 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDMASRII HYTEPISSPN bmy_05877T0/1-954 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDTASRII HYTEPINSPN BACU018017/1-925 VEKGQLLEYI LTDLRVPHSY EVRLTPYTTF GAGDTASRII HYTE------ 751 800 ENSTTRP00000001037/1-956 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG ENSP00000402584/1-955 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG ENSBTAP00000044710/1-955 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG bmy_05877T0/1-954 LSDNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG BACU018017/1-925 --HNTCHFED EKICGYTQDL TDNFDWTRQN ALTQNPKRSP NTGPPTDISG 801 850 ENSTTRP00000001037/1-956 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS ENSP00000402584/1-955 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS ENSBTAP00000044710/1-955 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS bmy_05877T0/1-954 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS BACU018017/1-925 TPEGYYMFIE TSRPRELGDR ARLVSPLYNA SAKFYCVSFF YHMYGKHIGS 851 900 ENSTTRP00000001037/1-956 LNLLVRSRNK GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG ENSP00000402584/1-955 LNLLVRSRNK GALDTHAWSL SGNKGNVWQQ AHVPISPSGP FQIIFEGVRG ENSBTAP00000044710/1-955 LNLLVRSRSK GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG bmy_05877T0/1-954 LNLLVRSRNR GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG BACU018017/1-925 LNLLVRSRNR GALDTHAWSL SGNKGNVWQQ AHVPINPSGP FQIIFEGVRG 901 950 ENSTTRP00000001037/1-956 SGYLGDIAID DVTLKKGECP RKQMDPNKVV VMPGSGAPWQ SRPQLWGPMA ENSP00000402584/1-955 PGYLGDIAID DVTLKKGECP RKQTDPNKVV VMPGSGAPCQ SSPQLWGPMA ENSBTAP00000044710/1-955 SGYLGDIAID DVTLKKGECP RKQMDPNKVV VMPGSGAPRQ PLPQLWGPVA bmy_05877T0/1-954 SGYLGDIAID DVTLQKGECP RKQMDPNKVV VMPGSGAAWQ PRPQLWGPVA BACU018017/1-925 SGYLGDIAID DVTLKKGECP RKQMDPNKVV VMPGSGAPWQ PRPQLWGPVA 951 1000 ENSTTRP00000001037/1-956 IFLLALQR ENSP00000402584/1-955 IFLLALQR ENSBTAP00000044710/1-955 TFLLALQR bmy_05877T0/1-954 IFLLALQR BACU018017/1-925 IFLLALQR