KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:20 2014 Check: 00 .. Name: ENSP00000343002/1-498 Len: 684 Check: 1603 Weight: 1.00 Name: ENSBTAP00000044727/1-411 Len: 684 Check: 1405 Weight: 1.00 Name: ENSTTRP00000001507/1-474 Len: 684 Check: 145 Weight: 1.00 Name: bmy_19871T0/1-476 Len: 684 Check: 9194 Weight: 1.00 Name: BACU018504/1-446 Len: 684 Check: 3202 Weight: 1.00 // 1 50 ENSP00000343002/1-498 MRPPACWWLL APPALLALLT CSLAFGLASE DTKKEVKQSQ DLEKSGISRK ENSBTAP00000044727/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001507/1-474 ---------- ---------- ----FALVSK GVKKEVKQSK NLEKSGISEK bmy_19871T0/1-476 ---------- ---------- ------MPDK LPGHLSGCSQ DKVDCGL--- BACU018504/1-446 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000343002/1-498 NDIDLKGIVF VIQSQSNSFH AKRAEQLKKS ILKQAADLT- ---------- ENSBTAP00000044727/1-411 ---------F L--------- ---------- ---------- ---------- ENSTTRP00000001507/1-474 NDVDLKGIAF VIQSQSNSFH AKKAEQLKQS ILKQAADLT- ---------- bmy_19871T0/1-476 --CDLKGIAF VIQSQSNSFH AKKAEQLKQS ILKQAADVTQ AEGAASGWEC BACU018504/1-446 --LDLKGIAF VIQSQSNSFH AKKAEQLKQS ILKQAADLT- ---------- 101 150 ENSP00000343002/1-498 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044727/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001507/1-474 ---------- ---------- ---------- ---------- ---------- bmy_19871T0/1-476 LLLREAWGSL EDRAWDAGPL EFFMLQLTAL SSAGEDEDGQ IRGRVVRASP BACU018504/1-446 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000343002/1-498 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044727/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001507/1-474 ---------- ---------- ---------- ---------- ---------- bmy_19871T0/1-476 ALWQERAGSS EGSAPWFARW KGSSKIKTHA HFEDSEAKRG QTSCLETSIL BACU018504/1-446 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000343002/1-498 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044727/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001507/1-474 ---------- ---------- ---------- ---------- ---------- bmy_19871T0/1-476 SLPTAKYLLK RIDTSNFVAF FCVLGLNNET ELDHKLMYLR IMGFLHSQSI BACU018504/1-446 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000343002/1-498 ---------- ---------- --QELPSVLL LHQLAKQEGA WTILPLLPHF ENSBTAP00000044727/1-411 ---------- ---------- --QEMPTVLL LHQLAQQEGA WTILPLLPHF ENSTTRP00000001507/1-474 ---------- ---------- --QEVPRVLL LHQLAQQEGA WTILPLLPHF bmy_19871T0/1-476 FRMLSYEIKT LSQMKMMNMY ENQEVPRVLL LHQLAQQEGA WTILPLLPHF BACU018504/1-446 ---------- ---------- --QEVPRVLL LHQLALQEGA WTILPLLPHF 301 350 ENSP00000343002/1-498 SVTYSRNSSW IFFCEEETRI QIPKLLETLR RYDPSKEWFL GKALHDEEAT ENSBTAP00000044727/1-411 SVTYSRNSSW IFFCEEDTRI QIVQLLETLR RYDPSKEWFL GKALHDEEST ENSTTRP00000001507/1-474 SVTYSRNSSW IFFCEEETRI QIPQLLQALR RYDPSKEWFL GKALHDEEST bmy_19871T0/1-476 SVTYSRNSSW IFFCEEETRI QIPQLLEALR RYDPSKEWFL GKALHDEEST BACU018504/1-446 SVTYSRNSSW IFFCEEETRI QIPQLLEALR RYDPSKEWFL GKALHDEEST 351 400 ENSP00000343002/1-498 IIHHYAFSEN PTVFKYPDFA AGWALSIPLV NKLTKRLKSE SLKSDFTIDL ENSBTAP00000044727/1-411 IIHHYAFSEN PTVFKYPDLA AGWALSIPLV NKLTKRLKSE SLKSDFTIDL ENSTTRP00000001507/1-474 IIHHYAFSEN PTVFKYPDFA AGWALSIPLV NKLTKRLKSE SLKSDFTIDL bmy_19871T0/1-476 IIHHYAFSEN PTVFKYPDFA AGWALSIPLV NKLTKRLKSE SLKSDFTIDL BACU018504/1-446 IIHHYAFSEN PTVFKYPDFA AGWALSIPLV NKLTKRLKSE SLKSDFTIDL 401 450 ENSP00000343002/1-498 KHEIALYIWD KGGGPPLTPV PEFCTNDVDF YCATTFHSFL PLCRKPVKKK ENSBTAP00000044727/1-411 KHEIALYIWD GGDGLPLTPV PEFCTDIVGS SCATSFQSSL PLCGNPVKKE ENSTTRP00000001507/1-474 KYEIALYIWD RGDGPPLTPV PEFCTDGADS SCATTFHSFL PLCGNPVKKK bmy_19871T0/1-476 KHEIALYIWD RGDGPPLTPV PEFCTDGVDS SCATTFHSFL PLCGNPVKKK BACU018504/1-446 KHEIALYIWD RGDGPPLTPV PEFCTDGVDS SCATTFHSFL PLCGNPVKKK 451 500 ENSP00000343002/1-498 DIFVAVKTCK KFHGDRIPIV KQTWESQASL IEYYSDYTEN SIPTVDLGIP ENSBTAP00000044727/1-411 DIFVAVKTCK KFHGDRIPIV KQTWAGQAGH LEYYSDYADN SIPTVDLGIP ENSTTRP00000001507/1-474 DIFVAVKTCK KFHGDRIPIV KQTWAGQAGH IEYYSDYADS SVPTVDLGIP bmy_19871T0/1-476 DIFVAVKTCK KFHGDRI--- ---------- ---------- ---------- BACU018504/1-446 DIFVAVKTCK KFHGDRIPIV KQTWAGQAGH IEYYSDYADS SIPTVDLGIP 501 550 ENSP00000343002/1-498 NTDRGHCGKT FAILERFLNR SQDKTAWLVI VDDDTLISIS RLQHLLSCYD ENSBTAP00000044727/1-411 NTDRGHCGKT FAILERFLNH SHDKIPWLVI VDDDTLISIS RLRHLLSCYD ENSTTRP00000001507/1-474 NTERGHCGKT FAILERFLNH SYDRIAWLVI VDDDTLIXXX XXXXXXXXXX bmy_19871T0/1-476 ---------- ---------- ---------- ---------- QTRYKLNPQN BACU018504/1-446 NTERGHCGKT FAILERFLNH SYDKIAWLVI VDDDTLIRLR QGRYK---KI 551 600 ENSP00000343002/1-498 SGEPVFLGER YGYGLGTGGY SYITGGGGMV FSREAVRRLL ASKCRCYSND ENSBTAP00000044727/1-411 TREPVFLGER YGYGLGTGGY SYVTGGGGMV FSKEAIRRLL ASKCRCYSND ENSTTRP00000001507/1-474 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19871T0/1-476 KRD----NDK Y--------- ---------V IEVEAVRL-- ---------- BACU018504/1-446 FGTFFFLPES KEVLRKKSAC PEDTEVSLER FSLAESGTRA SVRLRTIMDY 601 650 ENSP00000343002/1-498 APDDMVLGMC FSGLGIPVTH ---SPLFHQA RPVDYPKDYL SHQVPISFHK ENSBTAP00000044727/1-411 APDDMVLGMC FSGLGIPVTH ---SPLFHQA RPVDYPKDYL SHQVPVSFHK ENSTTRP00000001507/1-474 XXXXXXXXXX XXXXXXXXXX ---XXXXXXA RPVDYPKDYL SHQVPISFHK bmy_19871T0/1-476 ---------- -----ISIPH ---------- ---------- --------HT BACU018504/1-446 QPLKLGIREF MLIIKKEIDK ERDSLFFLQA RPVDYPKDYL SHQVPISFHK 651 700 ENSP00000343002/1-498 HWNIDPVKVY FTWLAPSDED KARQETQKGF REEL ENSBTAP00000044727/1-411 HWNIDPVKVY FTWLAPDEED RARQQSRRGL REEL ENSTTRP00000001507/1-474 HWNIDPVKVY FTWLAPSEED RARQETQKGF KEEL bmy_19871T0/1-476 T-SITKIN-- ---------- ---------- ---- BACU018504/1-446 HWNIDPVKVY FTWLAPSEED RARQETRKGF KEEL