KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:25 2014 Check: 00 .. Name: ENSP00000306473/1-672 Len: 685 Check: 3224 Weight: 1.00 Name: ENSBTAP00000044758/1-674 Len: 685 Check: 363 Weight: 1.00 Name: bmy_20555T0/1-411 Len: 685 Check: 7490 Weight: 1.00 Name: BACU001901/1-664 Len: 685 Check: 1554 Weight: 1.00 // 1 50 ENSP00000306473/1-672 MADGSLTGGG LEAAAMAP-- ERMGWAVEQE LASLEKGLFQ DEDSCSDCSY ENSBTAP00000044758/1-674 MAEGLLAGGG LGSEAMAPEP ELPGWATDEE LERLEKGLFE NEDSCSDCSD bmy_20555T0/1-411 MADGLLAGGG LGSEAMARDH ERTGWAVEEE LAPFGKGLFE DEDSYSDCSN BACU001901/1-664 MADGLLAGGG LGSEAMARDH ERTGWAVEEE LAPFGKGLFE DEDSYSDCSN 51 100 ENSP00000306473/1-672 RDKPGSSLQS FMPEGKTFFP EIFQTNQLLF YERFRAYQDY IL-------- ENSBTAP00000044758/1-674 RAKPGSSLQS FVPEGKTHFP EMFQTSQLLF YERFRAYQDY IL-------- bmy_20555T0/1-411 HDKPAPILIA F--------- NLF------- ---------- -V-------- BACU001901/1-664 YDKPGTSLQS FVPEGKTNFP EMFQTSHLLF YERFRAYQDY ILAPILIAFD 101 150 ENSP00000306473/1-672 ---ADCKASE VQEFTAEFLE KVLEPSGWRA VWHTNVFKVL VEITDVDFAA ENSBTAP00000044758/1-674 ---ADCKASE VKEFTAEFLE KVLEPSGWRA VWQTNVFEVL VEVTDVDFAA bmy_20555T0/1-411 ---ADCKASE VKEFTAEFLE KVLEPSGWRA VWHTNVFKVL VEVTDVDYAA BACU001901/1-664 LFVADCKASE VKEFTAEFLE KVLEPSGWRA VWRTNVFKVL VEVTDVDFAA 151 200 ENSP00000306473/1-672 LKAVVRLAEP YLCDSQVSTF TMECMKELLD LKEHRLPLQE LWVVFDDSGV ENSBTAP00000044758/1-674 LKAVVRLADP YLCESQVSAF TLECMKELLD LKEYRLPLQE LWVVFDDSGL bmy_20555T0/1-411 LKAVVRLADP YLCESQVSTF TLECMKELLD LKEHQLPLQE LWVVFDDSGV BACU001901/1-664 LKAVVRLADP YLCESQVSTF TLECMKELLD LKEHQLSLQE LWVVFDDSGV 201 250 ENSP00000306473/1-672 FDQTALAIEH VRFFYQNIWR SWDEEEEDEY DYFVRCVEPR LRLHYDILED ENSBTAP00000044758/1-674 FDQTALAIEH VRFFYQNIWR SWDEEEEDEY DYFVRCVEPR LRLHYDILED bmy_20555T0/1-411 FDQTALAIEH IR-------- ---------- ---------- ---------- BACU001901/1-664 FDQTALAIEH IRFFYQNIWR SWDEEEEDEY DYFVRCVEPR LRLHYDILED 251 300 ENSP00000306473/1-672 RVPSGLIVDY HNLLSQCEES YRKFLNLRSS LSNCNSDSEQ ENISMVEGLK ENSBTAP00000044758/1-674 RVPSGLIVDY QNLLTQCEES YRKFLNLRSS LSNCNSDSEQ ENISMVEGLK bmy_20555T0/1-411 ---------- ---------- ---------- ---------- ---------- BACU001901/1-664 RVPSGLIVDY QNLLTQCEES YRKFLNLRSS LSNCNSDSEQ ENISMVEGLK 301 350 ENSP00000306473/1-672 LYSEMEQLKQ KLKLIENPLL RYVFGYQKNS NIQAKGVRSS GQKITHVVSS ENSBTAP00000044758/1-674 LYSEIEQLKQ KLKLIENPLL RYVFGYQKNS NIQAKGIRPN GRKITHVVSS bmy_20555T0/1-411 ---------- ---------- ---------- ---------- ---------- BACU001901/1-664 LYSEIEQLKQ KLKLIENPLL RYVFGYQKNS NIQAKGIRPN GQKVTHVVSS 351 400 ENSP00000306473/1-672 TMMAGLLRSL LTDRLCQEPG EEEREIQFHS DPLSAINACF EGDTVIVCPG ENSBTAP00000044758/1-674 TMMTGLLQSL LRDRLCPEPC KEEIEIQFHS DPLSAINASY EGDTVIVCPG bmy_20555T0/1-411 ---------- --DKLCPEPC KEEIEIQFHS DPLSAINTCY EGDTVIVCPG BACU001901/1-664 TMTTGLLQSL LRDKLCPEPC KEEIEIQFHS DPLSAINTCY EGDTVVVCPG 401 450 ENSP00000306473/1-672 HYVVHGTFSI ADSIELEGYG LPDDIVIEKR GKGDTFVDCT GADIKISGIK ENSBTAP00000044758/1-674 HYVVHGAFSI ADSIELEGYG LPDDIVIEKK GKGDTFVDCT GADIKISSMK bmy_20555T0/1-411 HYVVHGTFSI ADSIELE--- ---------- ---------- ---------- BACU001901/1-664 HYVVHGTFSI ADSIELEGYG LTDDIVIEKR GKGDTFVDCT ---------- 451 500 ENSP00000306473/1-672 FVQHDAVEGI LIVHRGKTTL ENCVLQCETT GVTVRTSAEF LMKNSDLYGA ENSBTAP00000044758/1-674 FVQHDAVEGI LIIHRGKTTL ENCVLQCETT GVTVRTSAEF LMKNSDLYGA bmy_20555T0/1-411 ---------- ---------- ---------- ---------- ---------- BACU001901/1-664 ---------- -VIHRGKTTL ENCVLQCETT GVTVRTSAEF LMKNSDLYGA 501 550 ENSP00000306473/1-672 KGAGIEIYPG SQCTLSDNGI HHCKEGILIK DFLDEHYDIP KISMVNNIIH ENSBTAP00000044758/1-674 KGAGIEIYPG SKCTLSDNGI HHCKEGILIK DFLDEHYDIP KISMVNNVIH bmy_20555T0/1-411 ---GIEIYPG SKCTLSDNGI HHCKEGILIK DFLDEHYDIP KISMVNNVIH BACU001901/1-664 KGAGIEIYPG SKCTLSDNGI HHCKEGILIK DFLDEHYDIP KISMVSNVIH 551 600 ENSP00000306473/1-672 NNEGYGVVLV KPTIFSDLQE NAEDGTEENK ALKIQTSGEP DVAERVDLEE ENSBTAP00000044758/1-674 NNEGYGVVLV KPTIFSDLQE DAQDETEENK ALKVQTSGEA DVAERVDLEE bmy_20555T0/1-411 NNEGYGVVLV KPTIFSDLQE NAQDETEENK ALKVQTSGEA DVAERVDLEE BACU001901/1-664 NNEGYGVVLV KPTIFSDLQE NAQDETEENK ALKVQTSGET DVAERVDLEE 601 650 ENSP00000306473/1-672 LIECATGKME LCARTDPSEQ VEGNCEIVNE LIAASTQKGQ IKKKRLSELG ENSBTAP00000044758/1-674 LIQCATGKME LYARAELSEQ VEGNCEIVNE LVAASTQKGQ MKKKRLSELG bmy_20555T0/1-411 LIECATGKME LYARADLSEQ VEGNCEIVNE LVAASTQKGQ LKKKRLSELG BACU001901/1-664 LIECATGKME LYARADLSEQ VEGNCEIVNE LVAASTQKGQ LKKKRLSELG 651 700 ENSP00000306473/1-672 ITQADDNLMS QEMFVGIVGN QFKWNGKGSF GTFLF ENSBTAP00000044758/1-674 ITQADDNLMS QEMFVSIVGN QFKWNGKGSF GTFLF bmy_20555T0/1-411 ITLADDNLMS QEMFVSIVGN QFKWNGKGSF GTFLF BACU001901/1-664 ITLADDNLMS QEMFVSIVGN QFKWNGKGSF GTFLF