KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:25 2014 Check: 00 .. Name: ENSBTAP00000044773/1-250 Len: 339 Check: 8059 Weight: 1.00 Name: ENSP00000344831/1-338 Len: 339 Check: 7603 Weight: 1.00 Name: ENSTTRP00000006027/1-338 Len: 339 Check: 7502 Weight: 1.00 Name: BACU019161/1-338 Len: 339 Check: 8022 Weight: 1.00 Name: bmy_19659T0/1-171 Len: 339 Check: 5650 Weight: 1.00 // 1 50 ENSBTAP00000044773/1-250 ---------- ---------- ---------- ---------- ---------- ENSP00000344831/1-338 MDPETRGQEI IKVTPLQQML ASCTGAILTS VIVTPLDVVK IRLQAQNNPL ENSTTRP00000006027/1-338 MDPEAAGPPI IKVTPLQQMI ASCTGAILTS LMVTPFDVVK IRLQAQNNPF BACU019161/1-338 MDPEAEGPPI IKVTPLQQML ASCTGAILTS LMVTPFDVVK IRLQAQNNPF bmy_19659T0/1-171 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000044773/1-250 ---------- ---------- ---------- --------DA FLKIIRNEGI ENSP00000344831/1-338 PKGKCFVYSN GLMDHLCVCE EGGNKLWYKK PGNFQGTLDA FFKIIRNEGI ENSTTRP00000006027/1-338 SKGKCFLYSN GLMDHLCVCD EEGNKAWYKK PGRFQGTLDA FLKIIRNEGI BACU019161/1-338 PKGKCFLYSN GLMDHLCVCE EEGNKAWYKK PGRFQGTLDA FLKIIRNEGI bmy_19659T0/1-171 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000044773/1-250 KSLWSGLPPT LVMAVPATVI YFTCYDQLTA LLRSKLGENE SRIPIVAGIV ENSP00000344831/1-338 KSLWSGLPPT LVMAVPATVI YFTCYDQLSA LLRSKLGENE TCIPIVAGIV ENSTTRP00000006027/1-338 KSLWSGLPPT LVMAVPATVI YFTCYDQLTV LLRSKLGEGE SHIPIVAGIV BACU019161/1-338 KSLWSGLPPT LVMAVPATVI YFTCYDQLTA LLRSKLGENE SRIPIVAGIL bmy_19659T0/1-171 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000044773/1-250 ARLGAVTVIS PLELIRTKMQ SKKFSYEELH RFVSKKVSED GWISLWRGWA ENSP00000344831/1-338 ARFGAVTVIS PLELIRTKMQ SKKFSYVELH RFVSKKVSED GWISLWRGWA ENSTTRP00000006027/1-338 ARLGAVTVIS PLELIRTKMQ SKKFSYEELH QFVSKKVSED GWISLWKGWA BACU019161/1-338 ARVGAVTVIS PLELIRTKMQ SKKFSYEELH QLVSKKVSED GWISLWRGWA bmy_19659T0/1-171 ---------- --------MQ SKKFSYEELH QFVSKKVSED GWISLWRGWA 201 250 ENSBTAP00000044773/1-250 PTILRDVPFS VFLLFKYQLV STLLCSASGS FPPAFLMMYS AYSLEGKFAA ENSP00000344831/1-338 PTVLRDVPFS AMYWYNYEIL KKWLCEKSGL YEPTFMINFT SGALSGSFAA ENSTTRP00000006027/1-338 PTVLRDVPFS AMYWYNYEVL KKWLCAKSGL CEPTFMINFT SGALSGSFAA BACU019161/1-338 PTVLRDVPFS AMYWYNYEVL KKWLCAKSGL YEPTFMINFT SGALSGSFAA bmy_19659T0/1-171 PTVLRDVPFS AMYWYNYEVL KKWLCAKSGL CEPTFMINFT SGALSGSFAA 251 300 ENSBTAP00000044773/1-250 VVTLPFDVVK TQKQTQLWIY ESQKISMPLQ MSTWTIMKNI VAKNGFSGFF ENSP00000344831/1-338 VATLPFDVVK TQKQTQLWTY ESHKISMPLH MSTWIIMKNI VAKNGFSGLF ENSTTRP00000006027/1-338 VVTLPFDVVK TQKQTQLWMY DSRKISMPLQ MSTWAIMKNI VAKNGFSGLF BACU019161/1-338 VVTLPFDVVK TQKQTQLWIY ESRKISMPLQ MSTWAIMKNI VAKNGFSGLF bmy_19659T0/1-171 VVTLPFDVVK TQKQTQLWIY ESRKISMPLQ MSTWAIMKNI VAKNGFSGLF 301 350 ENSBTAP00000044773/1-250 TGLIPRLIKI APACAVMIST YEFGKSFFQK QNA-QRQRY ENSP00000344831/1-338 SGLIPRLIKI APACAIMIST YEFGKAFFQK QNV-RRQQY ENSTTRP00000006027/1-338 TGLIPRLIKI APACAVMIST YEFAKSFFQK QNA-RRQQY BACU019161/1-338 TGLIPRLIKI APACAVMIST YEFGKSFFQK QNA-RRQQY bmy_19659T0/1-171 TGLIPRLIKI APACAVMIST YEFGKSFFQK QNARRRQQY