KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:27 2014 Check: 00 .. Name: BACU007190/1-264 Len: 264 Check: 5728 Weight: 1.00 Name: bmy_19034T0/1-111 Len: 264 Check: 4012 Weight: 1.00 Name: ENSTTRP00000015419/1-82 Len: 264 Check: 9635 Weight: 1.00 Name: ENSP00000368503/1-113 Len: 264 Check: 3854 Weight: 1.00 Name: ENSBTAP00000044812/1-113 Len: 264 Check: 4848 Weight: 1.00 // 1 50 BACU007190/1-264 MPVEGGKTDM ERIGLFSEME YVTVGDKYVS QFNRPFNEAA SKNRQMLPGG bmy_19034T0/1-111 ---------- -----MADPE GLRLS--PQP PPSSPSSSDA SSASS--PGT ENSTTRP00000015419/1-82 ---------- ---------- ---------- ---------- --------GT ENSP00000368503/1-113 ---------- -----MADPE ELQVSSPPPP PPSSPSSSDA SAASS--PGG ENSBTAP00000044812/1-113 ---------- -----MANPE GLQVSPPPPP PPSSPSSSDT SSASS--PSA 51 100 BACU007190/1-264 SKEMSHLQAG YFDPHFVRIF EGEGYVNLNQ VRRRHMMEEA KKNLGKAFLP bmy_19034T0/1-111 PGGL-----G RPVP------ ------NRNS GRPVDPLEEV ELQIGDAAFS ENSTTRP00000015419/1-82 PGGL-----D RTVP------ ------NRNS GRPVDLLEEV ELQIGDAAFS ENSP00000368503/1-113 PVSL-----G WPVP------ ------SRSS GPTVDQLEEV ELQIGDAAFS ENSBTAP00000044812/1-113 PGVL-----G WPVP------ ------SRSS GRLVDPLEEV ELQIGDAAFS 101 150 BACU007190/1-264 SNGDKKLYAN VTIGKQFSHS ADFYDAAKLN DKKENEEHHR LLKGTPFKLN bmy_19034T0/1-111 LT--KLLEAA SAVSAQVEEL A--FKCT--- ------ENAR FLK------- ENSTTRP00000015419/1-82 LT--KLLEAA SAVSAQVEEL A--FKCT--- ------ENAR FLK------- ENSP00000368503/1-113 LT--KLLEAT SAVSAQVEEL A--FKCT--- ------ENAR FLK------- ENSBTAP00000044812/1-113 LT--KLLEAT SAVSAQVEEL A--FKCT--- ------ENAR FLK------- 151 200 BACU007190/1-264 LYPREYFDTN PYLFEKPLPP IKKAEKKEAL ANPFKPSSPG KKAGGMKAGT bmy_19034T0/1-111 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015419/1-82 ---------- ---------- ---------- ---------- ---------- ENSP00000368503/1-113 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044812/1-113 ---------- ---------- ---------- ---------- ---------- 201 250 BACU007190/1-264 FDSYPSHSAD PYGDKLTSHI SRKGAKVFHP PGGPKSRPTE SIMTLNVKRA bmy_19034T0/1-111 ---------- TWRDLL---- -KEGYDSLKP DN-------- ---------- ENSTTRP00000015419/1-82 ---------- TWRDLL---- -KEGYDSLKP DN-------- ---------- ENSP00000368503/1-113 ---------- TWRDLL---- -KEGYDSLKP DD-------- ---------- ENSBTAP00000044812/1-113 ---------- TWRDLL---- -KEGYDSLKP DN-------- ---------- 251 300 BACU007190/1-264 LNMKNYKIAS VQSY bmy_19034T0/1-111 ---------- ---- ENSTTRP00000015419/1-82 ---------- ---- ENSP00000368503/1-113 ---------- ---- ENSBTAP00000044812/1-113 ---------- ----