KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:27 2014 Check: 00 .. Name: ENSP00000349275/1-645 Len: 708 Check: 2634 Weight: 1.00 Name: bmy_14156T0/1-436 Len: 708 Check: 4878 Weight: 1.00 Name: ENSBTAP00000044846/1-701 Len: 708 Check: 457 Weight: 1.00 Name: ENSTTRP00000012088/1-646 Len: 708 Check: 9378 Weight: 1.00 Name: BACU003029/1-469 Len: 708 Check: 4733 Weight: 1.00 // 1 50 ENSP00000349275/1-645 ----MSERKE GRGKGKGKKK ERGSGKKPES AAGSQSPALP PRLKEMKSQE bmy_14156T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044846/1-701 MEIYSPDMSE GAAERSS-SP STQLSADPSL DGLPAAEDMP ETQTEDGRSP ENSTTRP00000012088/1-646 ----MSERKE GRGKGKG-KK DRGSGKKPAP AAGGPSPALP PRLKEMKNQE BACU003029/1-469 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000349275/1-645 SAAGSKL--- ---------- ---------- -VLRCETSSE YSSLRFKW-- bmy_14156T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044846/1-701 GLVGLTLPCC VCLETERLRG CLNSEKICIV PILACLVSLC LCIAGLKWVF ENSTTRP00000012088/1-646 SAAGSKL--- ---------- ---------- -VLRCETSSE YSSLKFRW-- BACU003029/1-469 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000349275/1-645 ------FKNG NELNRKNKPQ NIKIQKKPGK SELRINKASL A-------DS bmy_14156T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044846/1-701 VDKIFEYDSP THLDPGGLGQ DPIISLDPTA ASAAVWVSAK AYTSPVSRAQ ENSTTRP00000012088/1-646 ------FKNG NELNRKNKPQ NIKIQKRPGK SELRINKASL A-------DS BACU003029/1-469 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000349275/1-645 GEYMCKVISK LGNDSASANI TIVESNEIIT GMPASTEGAY VSSESPIR-- bmy_14156T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044846/1-701 SETEVRVTVQ VDNALGSSEP SAVPTPKNRI FAFSFRPSTA PSLPSPTRSP ENSTTRP00000012088/1-646 GEYMCKVISK LGNDSASANI TIVDANXXXX XXXXXXXXXX XXXXSPIR-- BACU003029/1-469 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000349275/1-645 ---------- --ISVSTEGA NTSSSTSTST TGTSHLVKCA EKEKTFCVNG bmy_14156T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044846/1-701 DVRTPKAATQ PPSTETNLQT APKLSTSTST AGTSHLVKCA EKEKTFCVNG ENSTTRP00000012088/1-646 ---------- --ISVSTEGA NTSSSTSTST TGTSHLVKCA EKEKTFCVNG BACU003029/1-469 ---------- ---------- ----ATSTST TGTSHLVKCA EKEKTFCVNG 251 300 ENSP00000349275/1-645 GECFMVKDLS NPSRYLCKC- -PNEFTGDRC QNYVMASF-- -YKHLGIEFM bmy_14156T0/1-436 -----MDNIQ HANRSVVKSW RGSGTFGDVC SHPLP----- ---------- ENSBTAP00000044846/1-701 GECFMVKDLS NPSRYLCKC- -PNEFTGDRC QNYVMASF-- -YKHLGIEFM ENSTTRP00000012088/1-646 GECFMVKDLS NPSRYLCKC- -QPGFTGARC TENVPMKVQT QEKHLGIEFM BACU003029/1-469 GECFMVKDLS NPSRYLCKC- -PNEFTGDRC QNYVMASF-- ---------Y 301 350 ENSP00000349275/1-645 EAEELYQKRV LTITGICIAL LVVGIMCVVA YCKTKKQRKK LHDRLRQSLR bmy_14156T0/1-436 EAEELYQKRV LTVTGICIAL LVVGIMCVVA YCKTKKQRKK LHDRLRQSLR ENSBTAP00000044846/1-701 EAEELYQKRV LTITGICIAL LVVGIMCVVA YCKTKKQRKK LHDRLRQSLR ENSTTRP00000012088/1-646 EAEELYQKRV LTITGICIAL LVVGIMCVVA YCKTKKQRKK LHDRLRQSLR BACU003029/1-469 KAEELYQKRV LTVTGICIAL LVVGIMCVVA YCKTKKQRKK LHDRLRQSLR 351 400 ENSP00000349275/1-645 SERNNMMNIA NGPHHPNPPP ENVQLVNQYV SKNVISSEHI VEREAETSFS bmy_14156T0/1-436 SERNNMVNIA NGPHHPNPPP ENVQLVNQYV SKNVISSEHI VEREAETSFS ENSBTAP00000044846/1-701 SERNTMMNVA NGPHHPNPPP ENVQLVNQYV SKNVISSEHI VEREAETSFS ENSTTRP00000012088/1-646 SERNNMVNIA NGPHHPNPPP ENVQLVNQYV SKNVISSEHI VEREAETSFS BACU003029/1-469 SERNNMVNIA NGPHHPNPPP ENVQLVNQYV SKNVISSEHI VEREAETSFS 401 450 ENSP00000349275/1-645 TSHYTSTAHH STTVTQTPSH SWSNGHTESI LSESHSVIVM SSVENSRHSS bmy_14156T0/1-436 TSHYTSTVHH STTVTQTPSH SWSNGHTESI ISESHSVIVM SSVENSRHSS ENSBTAP00000044846/1-701 TSHYTSTAHH STTVTQTPSH SWSNGHTESI ISESHSVIVM SSVENSRHSS ENSTTRP00000012088/1-646 TSHYTSTAHH STTVTQTPSH SWSNGHTESI ISESHSVIVM SSVENSRHSS BACU003029/1-469 TSHYTSTVHH STTVTQTPSH SWSNGHTESI ISESHSVIVM SSVENSRHSS 451 500 ENSP00000349275/1-645 PTGGPRGRLN GTGGPRECNS FLRHARETPD SYRDSPHSER YVSAMTTPAR bmy_14156T0/1-436 PTGGPRGRLN GLGGPRECNS FLRHARETPD SYRDSPHSER YVSAMTTPAR ENSBTAP00000044846/1-701 PTGGPRGRLN GLGGPRECNS FLRHARETPD SYRDSPHSER YVSAMTTPAR ENSTTRP00000012088/1-646 PTGGPRGRLN GLGGPRECNS FLRHARETPD SYRDSPHSER YVSAMTTPAR BACU003029/1-469 PTGGPRGRLN GLGGPRECNS FLRHARETPD SYRDSPHSER FVSAMTTPAR 501 550 ENSP00000349275/1-645 MSPVDFHTPS SPKSPPSEMS PPVSSMTVSM PSMAVSPFME EERPLLLVTP bmy_14156T0/1-436 MSPVDFHTPS SPKSPPSEMS PPVSSTTVSM PSMTVSPFVE EERPLLLVTP ENSBTAP00000044846/1-701 MSPVDFHTPS SPKSPPSEMS PPVSSTTVSM PSMAVSPFVE EERPLLLVTP ENSTTRP00000012088/1-646 MSPVDFHTPS SPKSPPSEMS PPVSSTTVSM PSMAVSPFVE EERPLLLVTP BACU003029/1-469 MSPVDFHTPS SPKSPPSEMS PPVSSTTVSM PSMAVSPFVE EERPLLLVTP 551 600 ENSP00000349275/1-645 PRLREKKFDH HPQQFSSFHH NPAHDSNSLP ASPLRIVEDE EYETTQEYEP bmy_14156T0/1-436 PWLRE-KDDH RAQQFNSFHC NPAHESNSPP PSPLRIVEDE EYETTQEYEL ENSBTAP00000044846/1-701 PRLRE-KYDH HAQQFNSFHC NPAHESNSLP PSPLRIVEDE EYETTQEYEP ENSTTRP00000012088/1-646 PWLRE-RDVQ HVQQFNSFHC NPAHESHSPP PSPLRIVEDE EYETTQEYEL BACU003029/1-469 PWLRE-KDDR HTQQFNSFHC NPAHESNSPP PSPLRIVEDE EYETTQEYEL 601 650 ENSP00000349275/1-645 AQEPVKKLAN -SRRAKRTKP NGHIANRLEV DSNTSSQSSN SESETEDERV bmy_14156T0/1-436 AQEPVKKLTN -SRRAKRTKP NGHIAHRLEM DSNTSAESSN SESETEDEKV ENSBTAP00000044846/1-701 AQEPVKKLTN SSRRAKRTKP NGHIAHRLEM DNNTGADSSN SESETEDERV ENSTTRP00000012088/1-646 TQESVKKLTN -SRRAKRTKP NGHIAHRLEM DSNTSAESSN SESETEDERV BACU003029/1-469 AQEPVKKLTN -SRRAKRTKP NGHIAHRLET DSNTSAESSN SESETEDEKV 651 700 ENSP00000349275/1-645 GEDTPFLGIQ NPLAASLEAT PAFRLADSRT NPAGRFSTQE EIQARLSSVI bmy_14156T0/1-436 GEDTPFLGVQ NPLAANLEAA PAFHLADSRT NPAGRFSPQE EMQARLSGVI ENSBTAP00000044846/1-701 GEDTPFLAIQ NPLAASLEAA PAFRLVDSRT NPTGRFSPQE ELQARLSGVI ENSTTRP00000012088/1-646 GEDTPFLGIQ NPLAANVEAA PAFHLADSRT NPAGRFSPQE ELQARLSGVI BACU003029/1-469 GEDTPFLGVQ NPLAADLEAA PAFHLADSRT NPAGRFSPQE ELQARLSGVI 701 750 ENSP00000349275/1-645 ANQDPIAV bmy_14156T0/1-436 ANQDPIAV ENSBTAP00000044846/1-701 ANQDPIAV ENSTTRP00000012088/1-646 ANQDPIAV BACU003029/1-469 ANQDPIAV