KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:32 2014 Check: 00 .. Name: ENSP00000302578/1-310 Len: 313 Check: 5043 Weight: 1.00 Name: ENSBTAP00000044908/1-287 Len: 313 Check: 4109 Weight: 1.00 Name: bmy_07438T0/1-312 Len: 313 Check: 8327 Weight: 1.00 Name: BACU013239/1-312 Len: 313 Check: 8562 Weight: 1.00 Name: ENSTTRP00000013474/1-252 Len: 313 Check: 8991 Weight: 1.00 // 1 50 ENSP00000302578/1-310 MGNQVEKLTH LSYKEVPTAD PTGVDRDDGP RIGVSYIFSN DDEDVEPQPP ENSBTAP00000044908/1-287 MGNQVEKLTH LSYKEVPTAD PTGVDRDDGP RIGVSYIFSN DDEDMEPQ-- bmy_07438T0/1-312 MGNQVEKLTH LSYKEVPTAD PTGVDRDDGP RIGVSYIFSN DDEDVEPQPP BACU013239/1-312 MGNQVEKLTH LSYKEVPTAD PTGVDRDDGP RIGVSYIFSN DDEDVEPQPP ENSTTRP00000013474/1-252 MGNQVEKLTH LSYKEVPTAD PTGVDRDDGP RIGVSYIFSN DDEDVEPQPP 51 100 ENSP00000302578/1-310 PQGPD--GGG LPDGGDGPPP PQPQPYDPRL HEVECSVFYR DECIYQKSFA ENSBTAP00000044908/1-287 ---------- ---------- ----PYDPRL HEVECSVFYR DECIYQKSFS bmy_07438T0/1-312 PRGSDGGGGG LPDGGDGLPL PSPQPYDPRL HEVECSVFYR DECIYQKSFA BACU013239/1-312 PQGPDGGGGG LPDGGDGLTL PSPQPYDPRL HEVECSVFYR DECIYQKSFA ENSTTRP00000013474/1-252 PQGPDGGGGG LPDGGDGLPL PSPQPYDPRL HEVECSVFYR DECIYQKSFA 101 150 ENSP00000302578/1-310 PGSAALSTYT PENLLNKCKP GDLVEFVSQA QYPHWAVYVG NFQVVHLHRL ENSBTAP00000044908/1-287 PGSAALSTYT PENLLNKCRP GDLVEFVSQA QYPHWAVYVG NFQVVHLHRL bmy_07438T0/1-312 PGSAALSTYT PENLLNKCRP GDLVEFVSQA QYPHWAVYVG NFQVVHLHRL BACU013239/1-312 PGSAALSTYT PENLLNKCRP GDLVEFVSQA QYPHWAVYVG NFQVVHLHRL ENSTTRP00000013474/1-252 PGSAALSTYT PENLLNKCRP GDLVEFVSQA QYPHWAVYVG NFQVVHLHRL 151 200 ENSP00000302578/1-310 EVINSFLTDA SQGRRGRVVN DLYRYKPLSS SAVVRNALAH VGAKERELSW ENSBTAP00000044908/1-287 EVSNSFLTDA SQGRRGRVVN DLYRYKPLSP SAVVRNALAH VGAKERELSW bmy_07438T0/1-312 EVSNSFLTDA SQGRRGRVVN DLYRYKPLSP SAVVRNALAH VGAKERELSW BACU013239/1-312 EVSNSFLTDA SQGRRGRVVN DLYRYKPLSP SAVVRNALAH VGAKERELSW ENSTTRP00000013474/1-252 EVSNSFLTDA SQGRRGRVVN ELYRYKPLSP SAVVRNALAH VGAKERELSW 201 250 ENSP00000302578/1-310 RNSESFAAWC RYGKREFKIG GELRIGKQPY RLQIQLSAQR SHTLEFQSLE ENSBTAP00000044908/1-287 RNSESFAAWC RYGKREFKIG GELRIGKQPY RLQIQLSAQR SHTLEFQSLE bmy_07438T0/1-312 RNSESFAAWC RYGKREFKIG GELRIGKQPY RLQIQLSAQR SHTLEFQSLE BACU013239/1-312 RNSESFAAWC RYGKREFKIG GELRIGKQPY RLQIQLSEQR SHTLEFQSLE ENSTTRP00000013474/1-252 RNSESFAAWC RYGKREFKIG GELRIGKQPY RLQIQLSAQR SHTLEFQSLE 251 300 ENSP00000302578/1-310 DLIMEKRRND QIGRAAVLQE LATHLHPAEP EEGDSNVART TPPPGRPPAP ENSBTAP00000044908/1-287 DLIMEKRRND QIGRTAVLQE LATHLHPVEP DEGDSDATRT TPPPGRLPAP bmy_07438T0/1-312 DLIMEKRRND QIGRAAVLQE LAMHLHPAEP DVGDSDAART TPPPGRPPAP BACU013239/1-312 DLIMEKRRND QIGRAAVLQE LATHLHPAEP DVGDSDAART TPPPGRPPAP ENSTTRP00000013474/1-252 DL-------- ---------- ---------- ---------- ---------- 301 350 ENSP00000302578/1-310 SSEEED-GEA VAH ENSBTAP00000044908/1-287 GREEEENRET VVH bmy_07438T0/1-312 AREEGD-REA VVH BACU013239/1-312 AREEGD-RGA VVH ENSTTRP00000013474/1-252 ---------- ---