KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:35 2014 Check: 00 .. Name: bmy_20683T0/1-1118 Len: 1182 Check: 9612 Weight: 1.00 Name: ENSTTRP00000002353/1-1044 Len: 1182 Check: 920 Weight: 1.00 Name: ENSP00000354251/1-1134 Len: 1182 Check: 4116 Weight: 1.00 Name: ENSBTAP00000044947/1-1093 Len: 1182 Check: 4134 Weight: 1.00 Name: BACU014049/1-1028 Len: 1182 Check: 1925 Weight: 1.00 // 1 50 bmy_20683T0/1-1118 ---------- ---------- ---------- ----MYVKDA VEACGDPKAK ENSTTRP00000002353/1-1044 ---------- ---------- ---------- ------QGQV WKACGDPKAK ENSP00000354251/1-1134 MSRSVLQPSQ QKLAEKLTIL NDRGVGMLTR LYNIKKQGQV WKACGDPKAK ENSBTAP00000044947/1-1093 ---------- ---------- ---------- ---------- --ACGDPKAK BACU014049/1-1028 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_20683T0/1-1118 PSYLIDKNLE SAVKFIVRKF PAVETRNNNQ QLAQLQKEKS EILKNLALYY ENSTTRP00000002353/1-1044 PSYLIDKNLE SAVKFIVRKF PAVETRNNNQ QLAQLQKEKS EILKNLALYY ENSP00000354251/1-1134 PSYLIDKNLE SAVKFIVRKF PAVETRNNNQ QLAQLQKEKS EILKNLALYY ENSBTAP00000044947/1-1093 PSYLIDKNLE SAVKFIVRKF PAVETRNNNQ QLAQLQKEKS EILKNLALYY BACU014049/1-1028 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_20683T0/1-1118 FTFVDVMEFK DHVCELLNTI DVCQVFFDIT VNFDLTKNYL DLIITYTTLM ENSTTRP00000002353/1-1044 FTFVDVMEFK DHVCELLNTI DVCQVFFDIT VNFDLTKNYL DLIITYTXLI ENSP00000354251/1-1134 FTFVDVMEFK DHVCELLNTI DVCQVFFDIT VNFDLTKNYL DLIITYTTLM ENSBTAP00000044947/1-1093 FTFVDVMEFK DHVCELLNTI DVCQVFFDIT VNFDLTKNYL DLIITYTTLM BACU014049/1-1028 ------MEFK DHVCELLNTI DVCQVFFDIT VNFDLTKNYL DLIITYTTLM 151 200 bmy_20683T0/1-1118 ILLSRIEERK AIIGLYNYAH EMTHGASDRE YPRLGQMIVD YENPLKKMME ENSTTRP00000002353/1-1044 VLL------- ---------- ---------- ---------- ---------- ENSP00000354251/1-1134 ILLSRIEERK AIIGLYNYAH EMTHGASDRE YPRLGQMIVD YENPLKKMME ENSBTAP00000044947/1-1093 ILLSRIEERK AIIGLYNYAH EMTHGASDRE YPRLGQMIVD YENPLKKMME BACU014049/1-1028 ILLSRIEERK AIIGLYNYAH EMTHGASDRE YPRLGQMIVD YENPLKKMME 201 250 bmy_20683T0/1-1118 EFVPHSKSLS DALISLQMVY PRRNLSADQW RNAQLLSLIS APSTMLNPAQ ENSTTRP00000002353/1-1044 -------SLS DALISLQMVY PRRNLSADQW RNAQLLSLIS APSTMLNPAQ ENSP00000354251/1-1134 EFVPHSKSLS DALISLQMVY PRRNLSADQW RNAQLLSLIS APSTMLNPAQ ENSBTAP00000044947/1-1093 EFVPHSKSLS DALISLQMVY PRRNLSADQW RNAQLLSLIS APSTMLNPAQ BACU014049/1-1028 EFVPHSKSLS DALISLQMVY PRRNLSADQW RNAQLLSLIS APSTMLNPAQ 251 300 bmy_20683T0/1-1118 SDTV------ ------WF-F GFILCHGILN TDATALNLWK LALQSSSCLS ENSTTRP00000002353/1-1044 SDTMPCEYLS LDAMEKWIIF GFILCHGILN TDATALNLWK LALQSSSCLS ENSP00000354251/1-1134 SDTMPCEYLS LDAMEKWIIF GFILCHGILN TDATALNLWK LALQSSSCLS ENSBTAP00000044947/1-1093 SDTMPCEYLS LDAMEKWIIF GFILCHGILN TDATALNLWK LALQSSSCLS BACU014049/1-1028 SDTMPCEYLS LDAMEKWIIF GFILCHGILN TDATALNLWK LALQSSSCLS 301 350 bmy_20683T0/1-1118 LFRDEVFHIH KAAEDLFVNI RGYNKRINDI RECKEAAVSH AGSMHRERRK ENSTTRP00000002353/1-1044 LFRDEVFHIH KAAEDLFVNI RGYNKRINDI RECKEAAVSH AGSMHRERRK ENSP00000354251/1-1134 LFRDEVFHIH KAAEDLFVNI RGYNKRINDI RECKEAAVSH AGSMHRERRK ENSBTAP00000044947/1-1093 LFRDEVFHIH KAAEDLFVNI RGYNKRINDI RECKEAAVSH AGSMHRERRK BACU014049/1-1028 LFRDEVFHIH KAAEDLFVNI RGYNKRINDI RECKEAAVSH AGSMHRERRK 351 400 bmy_20683T0/1-1118 FLRSALKELA TVLSDQPGLL GPKALFVFMA LSFARDEIIW LLRHADNMPK ENSTTRP00000002353/1-1044 FLRSALKELA TVLSDQPGLL GPKALFVFMA LSFARDEIIW LLRHADNMPK ENSP00000354251/1-1134 FLRSALKELA TVLSDQPGLL GPKALFVFMA LSFARDEIIW LLRHADNMPK ENSBTAP00000044947/1-1093 FLRSALKELA TVLSDQPGLL GPKALFVFMA LSFARDEIIW LLRHADNMPK BACU014049/1-1028 FLRSALKELA TVLSDQPGLL GPKALFVFMA LSFARDEIIW LLRHADNMPK 401 450 bmy_20683T0/1-1118 KSADDFIDK- HIAELIFYME ELRAHVRKYG PVMQRYYVQY LSGFDAVVLN ENSTTRP00000002353/1-1044 KSADDFIDK- HIAELIFYME ELRAHVRKYG PVMQRYYVQY LSGFDAVVLN ENSP00000354251/1-1134 KSADDFIDK- HIAELIFYME ELRAHVRKYG PVMQRYYVQY LSGFDAVVLN ENSBTAP00000044947/1-1093 KSADDFIEKR HIAELIFYME ELRAHVRKYG PVMQRYYVQY LSGFDAVVLN BACU014049/1-1028 KSADDFIDK- HIAELIFYME ELRAHVRKYG PVMQRYYVQY LSGFDAVVLN 451 500 bmy_20683T0/1-1118 ELVQ------ ---------- INLLCNLFPI VVEDGEVFDF RGMRLDWFRL ENSTTRP00000002353/1-1044 ELVQNLSVCP EDESIIMSSF VNTMTSLSVK QVEDGEVFDF RGMRLDWFRL ENSP00000354251/1-1134 ELVQNLSVCP EDESIIMSSF VNTMTSLSVK QVEDGEVFDF RGMRLDWFRL ENSBTAP00000044947/1-1093 ELVQNLSVCP EDESIIMSSF VNTMTSLSVK QVEDGEVFDF RGMRLDWFRL BACU014049/1-1028 ELVQNLSVCP EDESIIMSSF VNTMTSLSVK QVEDGEVFDF RGMRLDWFRL 501 550 bmy_20683T0/1-1118 QAYTSVSKAS LSLSDHRELG KMMNTIIFHT KMVDSLVEML VETSDLSIFC ENSTTRP00000002353/1-1044 QAYTSVSKAS LSLSDHRELG KMMNTIIFHT KMVDSLVEML VETSDLSIFC ENSP00000354251/1-1134 QAYTSVSKAS LGLADHRELG KMMNTIIFHT KMVDSLVEML VETSDLSIFC ENSBTAP00000044947/1-1093 QAYTSVSKAS LSLSDHRELG KMMNTIIFHT KMVDSLVEML VETSDLSIFC BACU014049/1-1028 QAYTSVSKAS LSLSDHRELG KMMNTIIFHT KMVDSLVEML VETSDLSIFC 551 600 bmy_20683T0/1-1118 FYSRAFEKMF QQCLELPSQS RYSIAFPLLC THFMSCTHEL CPEERHHIGD ENSTTRP00000002353/1-1044 FYSRAFEKMF QQCLELPSQS RYSIAFPLLC THFMSCTHEL CPEERHHIGD ENSP00000354251/1-1134 FYSRAFEKMF QQCLELPSQS RYSIAFPLLC THFMSCTHEL CPEERHHIGD ENSBTAP00000044947/1-1093 FYSRAFEKMF QQCLELPSQS RYSIAFPLLC THFMSCTHEL CPEERHHIGD BACU014049/1-1028 FYSRAFEKMF QQCLELPSQS RYSIAFPLLC THFMSCTHEL CPEERHHIGD 601 650 bmy_20683T0/1-1118 RSLSLCNMFL DEMAKQARNL ITDICTEQCT LSDQLLPKHC AKTISQAVNK ENSTTRP00000002353/1-1044 RSLSLCNMFL DEMAKQARNL ITDICTEQCT LSDQLLPKHC AKTISQAVNK ENSP00000354251/1-1134 RSLSLCNMFL DEMAKQARNL ITDICTEQCT LSDQLLPKHC AKTISQAVNK ENSBTAP00000044947/1-1093 RSLSLCNMFL DEMAKQARNL ITDICTEQCT LSDQLLPKHC AKTISQAVNK BACU014049/1-1028 RSLSLCNMFL DEMAKQARNL ITDICTEQCT LSDQLLPKHC AKTISQAVNK 651 700 bmy_20683T0/1-1118 KSKKQTGKKG EPEREKPGVE SMRKNRLVVT NLDKLHTALS ELCFSINYVP ENSTTRP00000002353/1-1044 KSKKQTGKKG EPEREKPGVE SMRKNRLVVT NLDKLHTALS ELCFSINYVP ENSP00000354251/1-1134 KSKKQTGKKG EPEREKPGVE SMRKNRLVVT NLDKLHTALS ELCFSINYVP ENSBTAP00000044947/1-1093 KSKKQTGKKG EPEREKPGVE SMRKNRLVVT NLDKLHTALS ELCFSINYVP BACU014049/1-1028 KSKKQTGKKG EPEREKPGVE SMRKNRLVVT NLDKLHTALS ELCFSINYVP 701 750 bmy_20683T0/1-1118 NMVVWEHTFT PREYLTSHLE IRFTKSIVGM TMYNQATQEI AKPSELLTSV ENSTTRP00000002353/1-1044 NMVVWEHTFT PREYLTSHLE IRFTKSIVGM TMYNQATQEI AKPSELLTSV ENSP00000354251/1-1134 NMVVWEHTFT PREYLTSHLE IRFTKSIVGM TMYNQATQEI AKPSELLTSV ENSBTAP00000044947/1-1093 NMVVWEHTFT PREYLTSHLE IRFTKSIVGM TMYNQATQEI AKPSELLTSV BACU014049/1-1028 NMVVWEHTFT PREYLTSHLE IRFTKSIVGM TMYNQATQEI AKPSELLTSV 751 800 bmy_20683T0/1-1118 RAYMTVLQSI ENYVQIDITR VFNNVLLQQT QHLDSHGEPT ITSLYTNWYL ENSTTRP00000002353/1-1044 RAYMTVLQSI ENYVQIDITR VFNNVLLQQT QHLDSHGEPT ITSLYTNWYL ENSP00000354251/1-1134 RAYMTVLQSI ENYVQIDITR VFNNVLLQQT QHLDSHGEPT ITSLYTNWYL ENSBTAP00000044947/1-1093 RAYMTVLQSI ENYVQIDITR VFNNVLLQQT QHLDSHGEPT ITSLYTNWYL BACU014049/1-1028 RAYMTVLQSI ENYVQIDITR VFNNVLLQQT QHLDSHGEPT ITSLYTNWYL 801 850 bmy_20683T0/1-1118 ETLLRQVSNG HIAYFPAMKA FVNLPTENEL TFNAEEYSDI SEMRSLSELL ENSTTRP00000002353/1-1044 ETLLRQVSNG HIAYFPAMKA FVNLPTENEL TFNAEEYSDI SEMRSLSELL ENSP00000354251/1-1134 ETLLRQVSNG HIAYFPAMKA FVNLPTENEL TFNAEEYSDI SEMRSLSELL ENSBTAP00000044947/1-1093 ETLLRQVSNG HIAYFPAMKA FVNLPTENEL TFNAEEYSDI SEMRSLSELL BACU014049/1-1028 ETLLRQVSNG HIAYFPAMKA FVNLPTENEL TFNAEEYSDI SEMRSLSELL 851 900 bmy_20683T0/1-1118 GPYGMKFLSE SLMWHISSQV AELKKLVVEN VDVLTQMRTS FDKPDQMAAL ENSTTRP00000002353/1-1044 GPYGMKFLSE SLMWHISSQV AELKKLVVEN VDVLTQMRTS FDKPDQMAAL ENSP00000354251/1-1134 GPYGMKFLSE SLMWHISSQV AELKKLVVEN VDVLTQMRTS FDKPDQMAAL ENSBTAP00000044947/1-1093 GPYGMKFLSE SLMWHISSQV AELKKLVVEN VDVLTQMRTS FDKPDQMAAL BACU014049/1-1028 GPYGMKFLSE SLMWHISSQV AELKKLVVEN VDVLTQMRTS FDKPDQMAAL 901 950 bmy_20683T0/1-1118 FKRLSCGFDI EYNSNKFQNN VLXPKSVDSV LKRMTIIGVI LSFRSLAQEA ENSTTRP00000002353/1-1044 FKRLS----- ---------- -----SVDSV LKRMTIIGVI LSFRSLAQEA ENSP00000354251/1-1134 FKRLS----- ---------- -----SVDSV LKRMTIIGVI LSFRSLAQEA ENSBTAP00000044947/1-1093 FKRLS----- ---------- -----SVDSV LKRMTIIGVI LSFRSLAQEA BACU014049/1-1028 FKRLS----- ---------- -----SVDSV LKRMTIIGVI LSFRSLAQEA 951 1000 bmy_20683T0/1-1118 LRDVLSYHIP FLVSSIEDFK DHIPRETDMK VAMNVYELSS AAGLPCEIDP ENSTTRP00000002353/1-1044 LRDVLSYHIP FLVSSIEDFK DHIPRETDMK VAMNVYELSS AAGLPCEIDP ENSP00000354251/1-1134 LRDVLSYHIP FLVSSIEDFK DHIPRETDMK VAMNVYELSS AAGLPCEIDP ENSBTAP00000044947/1-1093 LRDVLSYHIP FLVSSIEDFK DHIPRETDMK VAMNVYELSS AAGLPCEIDP BACU014049/1-1028 LRDVLSYHIP FLVSSIEDFK DHIPRETDMK VAMNVYELSS AAGLPCEIDP 1001 1050 bmy_20683T0/1-1118 ALVVALSSQK SENISPEEEY KIACLLMVFV AVSLPTLASN VMSQYSPAIE ENSTTRP00000002353/1-1044 ALVVALSSQK SENISPEEEY KIACLLMVFV AVSLPTLASN VMSQYSPAIE ENSP00000354251/1-1134 ALVVALSSQK SENISPEEEY KIACLLMVFV AVSLPTLASN VMSQYSPAIE ENSBTAP00000044947/1-1093 ALVVALSSQK SENISPEEEY KIACLLMVFV AVSLPTLASN VMSQYSPAIE BACU014049/1-1028 ALVVALSSQK SENISPEEEY KIACLLMVFV AVSLPTLASN VMSQYSPAIE 1051 1100 bmy_20683T0/1-1118 GNSDYEVIKD LIFWGHTETT NPICTFSGHC NNIHCLAKAI NQIAAALFTI ENSTTRP00000002353/1-1044 G--------- ---------- --------HC NNIHCLAKAI NQIAAALFTI ENSP00000354251/1-1134 G--------- ---------- --------HC NNIHCLAKAI NQIAAALFTI ENSBTAP00000044947/1-1093 G--------- ---------- --------HC NNIHCLAKAI NQIAAALFTI BACU014049/1-1028 G--------- ---------- --------HC NNIHCLAKAI NQIAAALFTI 1101 1150 bmy_20683T0/1-1118 HKGSIEDRLK EFLALASSSL LKIGQETDKT TTRNRESVYL LLDMIVQESP ENSTTRP00000002353/1-1044 HKGSIEDRLK EFLALASSSL LKIGQETDKT TTRNRESVYL LLDMIVQESP ENSP00000354251/1-1134 HKGSIEDRLK EFLALASSSL LKIGQETDKT TTRNRESVYL LLDMIVQESP ENSBTAP00000044947/1-1093 HKGSIEDRLK EFLALASSSL LKIGQETDKT TTRNRESVYL LLDMIVQESP BACU014049/1-1028 HKGSIEDRLK EFLALASSSL LKIGQETDKT TTRNRESVYL LLDMIVQESP 1151 1200 bmy_20683T0/1-1118 FLTMDLLESC FPYVLLRNAY HAVYKQSVTS SA ENSTTRP00000002353/1-1044 FLTMDLLESC FPYVLLRNAY HAVYKQSVTS SA ENSP00000354251/1-1134 FLTMDLLESC FPYVLLRNAY HAVYKQSVTS SA ENSBTAP00000044947/1-1093 FLTMDLLESC FPYVLLRNAY HAVYKQSVTS SA BACU014049/1-1028 FLTMDLLESC FPYVLLRNAY HAVYKQSVTS SA