KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:41 2014 Check: 00 .. Name: ENSBTAP00000045043/1-379 Len: 599 Check: 4762 Weight: 1.00 Name: ENSTTRP00000001280/1-414 Len: 599 Check: 4319 Weight: 1.00 Name: ENSP00000298699/1-414 Len: 599 Check: 8688 Weight: 1.00 Name: bmy_02197T0/1-588 Len: 599 Check: 2456 Weight: 1.00 // 1 50 ENSBTAP00000045043/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001280/1-414 ---------- ---------- ---------- ---------- ---------- ENSP00000298699/1-414 ---------- ---------- ---------- ---------- ---------- bmy_02197T0/1-588 MVGPQAVRVE SALTNSAGSA PGQHPQQSAA LLKPRTFRAL AQRPRSRVPR 51 100 ENSBTAP00000045043/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001280/1-414 ---------- ---------- ---------- ---------- ---------- ENSP00000298699/1-414 ---------- ---------- ---------- ---------- ---------- bmy_02197T0/1-588 HRGGPGRTPG SGLLAAEPSG SCSAEAKVPP CVLSRASLRV VMTLKTQRSV 101 150 ENSBTAP00000045043/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001280/1-414 ---------- ---------- ---------- ---------- ---------- ENSP00000298699/1-414 ---------- ---------- ---------- ---------- ---------- bmy_02197T0/1-588 SGISLTLVKY ELQQSPNGLS TCRQSTAEGS QCRFRHCEEA LGSDTVCSLW 151 200 ENSBTAP00000045043/1-379 ---------- ----MEMQQN CSISCFWETQ PLGCVKISCI FYHSKPRNIN ENSTTRP00000001280/1-414 ---------- ----MEMQQN CSISCFWETQ PLGCVKISCI FYHSKPRNIN ENSP00000298699/1-414 ---------- ----MEMQQN CSISCFWETQ PLGCVKISCI FYHSKPRNIN bmy_02197T0/1-588 REGKCLDPLC RFRHMEMQQN CSISCFWETQ PLGCVKISCI FYHSKPRNIN 201 250 ENSBTAP00000045043/1-379 GLFLPPSS-- ---------- --NIILQKET QEGIPPPTQS QEPLKPQENI ENSTTRP00000001280/1-414 GLFLPPSS-- ---------- --NITPQKET QEGIPPPTQS QEPLKPQENI ENSP00000298699/1-414 GLFLPPSS-- ---------- --NITLQKEI QEGIPLQSQS QEPLKPQENI bmy_02197T0/1-588 GLFLPPSSRL EENKDCISGQ RKDITPQKET QEGIPPPTQS QEPLKPQETI 251 300 ENSBTAP00000045043/1-379 SRPIHHPLVL KTNFEEEEEE EGEQNDASSL WTKTPEEIEE KRAIKEMCYK ENSTTRP00000001280/1-414 SRPIHHPLVL KTNFEEEEEE EDEQNDASSL WTKTPEEIEE KRAIKEMCYK ENSP00000298699/1-414 SRPIHHPLVL KTNF-EEEEE VDEQNDASSL WTKTPEEIEE KRAIKEMCYK bmy_02197T0/1-588 SRPIHHPLVL KTNFEEEEEE EDEQNDASSL WTKTPEEIEE KRAIKEMCYK 301 350 ENSBTAP00000045043/1-379 SGEYYRVHTP SDISSSKSIA SIVEKEIEKS LESGSELQEG DGLTVPTKFS ENSTTRP00000001280/1-414 SGEYYRFHTP PDILSSKSIA STVEKELEKP LENGSELQEG DSLTVPTKFS ENSP00000298699/1-414 SGEYYRFHTP PDILSSKSMT PTAEKQLEKP LENGSELQEG DSLTVPTKLS bmy_02197T0/1-588 SGEYYRFHTP PDTLSSKSIA STVEKELEKX LENGSELQEG DSLTVPTKFS 351 400 ENSBTAP00000045043/1-379 LFERQGEIKA SLDRKPRTDI AAFENGGGDC YVPQRIIFLG VDENEVLTEE ENSTTRP00000001280/1-414 LFERQGEIKA SLDRKARTDT AAFENGXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000298699/1-414 QYERQGEIKT SLHGKPKTDI AAFENGGGDC YVPQRVIFLG VDESEALTEE bmy_02197T0/1-588 LFERQGEIKA SLDRKPRTDI AAFENGGGDC YIPQRIIFLG VDENEALTEK 401 450 ENSBTAP00000045043/1-379 KESTISKCSN AK-------- ---------- ---------- ---------- ENSTTRP00000001280/1-414 XXXXXXXXXX XXXNKDSPHP KRSLTTRLVP TMHVLNATEN ISVKCREDPS ENSP00000298699/1-414 KEITISKCSN TKDNKDSPHP KHSLTTRLVP TTHVLNATEN ISMKCREDPS bmy_02197T0/1-588 KEITMSKCSN AKDNKDSPHP KRSLTTRLVP TTHVLNATEN ISMKCREDPS 451 500 ENSBTAP00000045043/1-379 -VNDVHPVMK PHFKGVKKRK WIYDEPKNFP DPGMQR-VQA SNPKNKMSYH ENSTTRP00000001280/1-414 SINDVQPVRK PHFKGL-KRK WIYDEPKNFP GTEMQRAVQS PNPKNKMSYH ENSP00000298699/1-414 SMNDVQPVKK PHFKGVKKRK WIYDEPQNFP NSGMQRAVQA PRPQNKMSYH bmy_02197T0/1-588 SINDVQPVRK PHFKGVKKRK WIYDEPKNFP GPGMRRAVQA PNPQNKMSYH 501 550 ENSBTAP00000045043/1-379 RNNKNKNSEN ASYIHVQRDA VRTVSLNAPP HGRPPHGSYN KADVTRNPNS ENSTTRP00000001280/1-414 RNNKNRNSEN ASYIHGQRDA VRTVSMNAPP RSRPTNGSYN KVDVNKEP-- ENSP00000298699/1-414 RNNKNRNAEN ASYIHVQRDA VRTVALNAPS RSRPTHGSYN KVHANREP-- bmy_02197T0/1-588 RNNKNGNSEN ASYIHVQRDA VRTVSMNAPP RSRPTNGSYN KVDVNKEP-- 551 600 ENSBTAP00000045043/1-379 SSVQINICQH HIMVQRGKKE FLFQKRIQKM KRYIQSQEEM GASKPGG-- ENSTTRP00000001280/1-414 ---KFNLCSD KYMSTSYNGS A-WQKRIPFS KTYSKTEKIY SEPRRNGRK ENSP00000298699/1-414 ---KPNLSPD KYTSTSYNDS A-WRKRIPFS KTYSKSEKIY PEPRRNGSK bmy_02197T0/1-588 ---KFNLYSD KYMSTSYNGS A-WRKRIPFS KTYSKTEKIY TEIF-----