KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:42 2014 Check: 00 .. Name: ENSP00000264260/1-599 Len: 631 Check: 9696 Weight: 1.00 Name: ENSBTAP00000045070/1-586 Len: 631 Check: 5142 Weight: 1.00 Name: ENSTTRP00000010588/1-587 Len: 631 Check: 5859 Weight: 1.00 Name: bmy_09501T0/1-535 Len: 631 Check: 6395 Weight: 1.00 Name: BACU004066/1-507 Len: 631 Check: 3234 Weight: 1.00 // 1 50 ENSP00000264260/1-599 -MLCLGWIFL WLVAGERIKG FNISGCSTKK LLWTYSTRSE EEFVLFCDLP ENSBTAP00000045070/1-586 MRLSLGWILL WLVARGRIRG LNTPDCITEK PLRTYSARCG EEFVLFCDLP ENSTTRP00000010588/1-587 ---------- --IAGGKNNG LSNQNCSTGK LLRTYSARCG EEFVLFCDFP bmy_09501T0/1-535 ---------- ---------- -----CSTGK LLRTYSARCG EEFVLFCDFP BACU004066/1-507 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264260/1-599 EPQKSHFCHR NRLSPKQVPE HLPFMGSNDL SDVQWYQQPS NGDPLEDIRK ENSBTAP00000045070/1-586 EPQKSHFYHG SQLSPTRASE YLPCSGSKNL SDVQWYLQPQ NGDAAVEITQ ENSTTRP00000010588/1-587 EPQKSHFYHR SQLSPTQISE HLPCSGSKNL SDVQWYLQPP NRDPLVEITQ bmy_09501T0/1-535 EPQKSHFYHR SQLSPTQSSE HLPCSGSKNL SDVQWYLQPQ NGDPLVEITQ BACU004066/1-507 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000264260/1-599 SYPHIIQDKC TLHFLTPGVN NSGSYICRPK MI--KSPYDV ACCVKMIL-E ENSBTAP00000045070/1-586 NAPQVIQEKS NLHFLSTGIN HAGLYICRPR MSFPRSPQEN ACCVRMIL-E ENSTTRP00000010588/1-587 NYPHVIQDKS TLHFLTTEMN HAGSYICRPR I---RSPKDE ACCVKMILCI bmy_09501T0/1-535 NYPHVIQDKS ILHFLTTEMN NAGSYICRPR I---RSPQDE ACCVKMIL-E BACU004066/1-507 ---------- --------MN TAGSYICRPR I---RSPQDE ACCVKMIL-E 151 200 ENSP00000264260/1-599 VKPQTNASCE YSASHKQDLL LGSTGSISCP SLSCQSDAQS PAVTWYKNGK ENSBTAP00000045070/1-586 VKPQTNMSCE SSVSHKQHLL LGSVSSIYCP GLSHQSDAQS PEVTWYQNGK ENSTTRP00000010588/1-587 VKPKTNMSCG SSIPHEQLLL LGSMDSIYCP GLSHQSDTQS PEVTWYQNGK bmy_09501T0/1-535 VKPKTNMSCG SSISHEQLLL LGSMGSIYCP GLSPQSDTQS PEVTWYQNGK BACU004066/1-507 VKPKANMSCG SSISHEQLLL LGSMGSIYCP GLSPQSDTQS PEVTWYQNGK 201 250 ENSP00000264260/1-599 LLSVERSNRI VVDEVYDYHQ GTYVCDYTQS DTVSSWTVRA VVQVRTIVGD ENSBTAP00000045070/1-586 LLSEKRSNPI EVDEVYYYHQ GTYVCDYTQT DNSSSWTVRA VVHVKTIVKN ENSTTRP00000010588/1-587 LLSEKRSNPI KVDDVYHHHQ GTYVCDHTQS DNSSSWTVRA VVRVKTIVKN bmy_09501T0/1-535 LLSEKRSNPI EVDEVYDYHQ GTYVCDYTQS DNSSLWTVRA VVQVKTIVKN BACU004066/1-507 LLSEKRSNPI EVDEVYDYHQ GTYVCDYTQS DNSSLWTARA VVQVKTIVKN 251 300 ENSP00000264260/1-599 TKLKPDILDP VEDTLEVELG KPLTISCKAR FGFERVFNPV IKWYIKDSDL ENSBTAP00000045070/1-586 TNLKPDILDP IKDTLEVELG KPLMLNCTAR FGFEINFNPV IKWYIRDSDQ ENSTTRP00000010588/1-587 TNLKPDILDP IKDALEVELG KPLTLNCTAR FGFEINFKPV IRWYVKDSDQ bmy_09501T0/1-535 TNLKPDILDP IKDTLEVELG ---------- ---------- ---------- BACU004066/1-507 TNLKPDILDP IKDTLEVELG KPLTLNCTAR FGFEINFKPV IRWYVKDSDQ 301 350 ENSP00000264260/1-599 EWEVSVPEAK SIKSTLKDEI IERNIILEKV TQRDLRRKFV CFVQNSIGNT ENSBTAP00000045070/1-586 EWEIKTPKGR SVKSTLKDEV IERVVLLEKV TQSDLHRKFI CFAQNSIGNT ENSTTRP00000010588/1-587 EWEVPTPEGR SVKSTLKNEV IERVVFLKEV TQSDLRRKFI CFAQNSIGNT bmy_09501T0/1-535 ---------- ---------- LEKVLGRPEC GLTG------ ---EAGVGGD BACU004066/1-507 EWEVATPEGR SVKSTLKDEV VERVVFLKEV TQSDLRRKFI CFAQNSIGNT 351 400 ENSP00000264260/1-599 TQSVQLKEKR --GVVLLYIL LGTIGTLVAV LAASALLYRH WIEIVLLYRT ENSBTAP00000045070/1-586 TQSIQLKKKT --GVVFLYIL LGAVMGLAGV LTAGALLYMY WIEIVLVYRT ENSTTRP00000010588/1-587 TQSIQLKEKK --GVVFLYIL LGTVMALAGV LTTGALFYMY WIEIVLLYRT bmy_09501T0/1-535 AAPVPAHGRR VSAVVFLYIL LGTVMALAGV LTAGALFYMY WIEIVLLYRT BACU004066/1-507 TQSIQLKERK --GVVFLYIL LGTVMALAGV LTAGALFYMY WIEIVLLYRT 401 450 ENSP00000264260/1-599 YQSKDQTLGD KKDFDAFVSY AKWSSFPSEA TSSLSEEHLA LSLFPDVLEN ENSBTAP00000045070/1-586 YWSKDKTLGD QKEFDAFVSY AKWSPFETEA SSSLSEETLA LNLLPDVLEN ENSTTRP00000010588/1-587 YQNKDETLGD KKEFDAFISY GKWSPLESEA TSSLSEETLA LSLFPEVLEN bmy_09501T0/1-535 YQNKDETLGD KKEFDAFISC GKWSSFESEA XSSLSEENLA LSLFPEVLEN BACU004066/1-507 YQNKDETLGD KKEFDAFISY GKWSSLESEA TSSLSEENLA LSLFPEVLEN 451 500 ENSP00000264260/1-599 KYGYSLCLLE RDVAPGGVYA EDIVSIIKRS RRGIFILSPN YVNGPSIFEL ENSBTAP00000045070/1-586 KYGYTLCLLE RDVAPGGVYT EDIVSIIKKS RRGIFILSPN YVSGPSIFEL ENSTTRP00000010588/1-587 KYGYTLCLLE RDVAPGGAYA EDIVSIIKKS RRGIFILSPS YVSGPSVFEL bmy_09501T0/1-535 KYGYTLCLLE RDVAPGGVYA EDIVSIIKKS RRGIFILSPS YVNGPSVFEL BACU004066/1-507 KYGYTLCLLE RDVAPGGVYA EDIVSIIKKS RRGIFILSPS YINGPSVFEL 501 550 ENSP00000264260/1-599 QAAVNLALDD QTLKLILIKF CYFQEPESLP HLVKKALRVL PTVTWRGLKS ENSBTAP00000045070/1-586 QAAVNLALED QTLKLILIKF SSFQEPESLP HLVRRALRVL PSVTWKGLKS ENSTTRP00000010588/1-587 QAAVNIALED QTLKLILIKF SSFQEPESLP HLVKKALRVL PTVTWRGFKS bmy_09501T0/1-535 QAAVNIALED QTLKLILIKF SSFQEPESLP HLVKKALRVL PTVTWRGFKS BACU004066/1-507 QAAVNIALED QTLKLILIKF SSFQEPESLP HLVKKALRVL PTVTWRGFKS 551 600 ENSP00000264260/1-599 VPPNSRFWAK MRYHMPVKNS QGFTWNQLRI TSRIFQWK-- GLSRTETTGR ENSBTAP00000045070/1-586 VPPNSRFWTQ IRYHMPVKSS RGVTWNHLRT MPWIF----- ---------- ENSTTRP00000010588/1-587 VPPNSRFWTQ IRYHMPVKSS KGFTWNHLRI SPRIFLKR-- -LSKTETAGR bmy_09501T0/1-535 VPPNSRFWTQ IRYHMPVKSS KGFTWNHLRI IPRIFFSRKD SVKQKPLGGA BACU004066/1-507 VPPNARFWTQ IRYHMPVKSS KGFTWNHLRI IPRIFFSRKD SVKQKPLGGA 601 650 ENSP00000264260/1-599 SSQPKE---- ---------- --W------- - ENSBTAP00000045070/1-586 -SLEK----- ---------- ---------- - ENSTTRP00000010588/1-587 RSQPKGR--- ---------- ---------- - bmy_09501T0/1-535 PSLKDGEMGP ELPPPTPLPS CPW------- - BACU004066/1-507 PSLKDGEMGP ELPPPTPLPS CPWCVERDPD G