KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:44 2014 Check: 00 .. Name: ENSBTAP00000045084/1-1028 Len: 1089 Check: 4015 Weight: 1.00 Name: bmy_17235T0/1-1072 Len: 1089 Check: 1186 Weight: 1.00 Name: ENSP00000351947/1-1028 Len: 1089 Check: 954 Weight: 1.00 Name: BACU010607/1-1028 Len: 1089 Check: 5143 Weight: 1.00 Name: ENSTTRP00000000211/1-1002 Len: 1089 Check: 1547 Weight: 1.00 // 1 50 ENSBTAP00000045084/1-1028 ---------- ---------- ---------- ------MNLF NLDRFRFEKR bmy_17235T0/1-1072 MLTPALSYVP EEGKRIYRGL KELFKGSFSK RVLFPNDIIF NVTPLKYKKY ENSP00000351947/1-1028 ---------- ---------- ---------- ------MNLF NLDRFRFEKR BACU010607/1-1028 ---------- ---------- ---------- ------MNLF NLDRFRFEKR ENSTTRP00000000211/1-1002 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000045084/1-1028 NKIEEAPEAT ---------P QPSQPGPSS- --PISLSAEE ENAEGEVSRA bmy_17235T0/1-1072 RRITKSNAKT SEFCYRYNFP ENGRAEDSSF KGPIPTSAEE ENAEGEVSRA ENSP00000351947/1-1028 NKIEEAPEAT ---------P QPSQPGPSS- --PISLSAEE ENAEGEVSRA BACU010607/1-1028 NKIEEAPEAT ---------P QPSQPGPSS- --PISLSAEE ENAEGEVSRA ENSTTRP00000000211/1-1002 -------EAT ---------P QPT---PDR- --SSSLSA-E EHAEG-VSRA 101 150 ENSBTAP00000045084/1-1028 GTPDSDVTEK TEDSSVPETP ENDRKASI-S YFKNQRGIQY IDLSSDSEDV bmy_17235T0/1-1072 GTPDSDITEK TEDSSVPETP ENERKASISS YFKNQRGIQY IDLSSDSEDV ENSP00000351947/1-1028 NTPDSDITEK TEDSSVPETP DNERKASI-S YFKNQRGIQY IDLSSDSEDV BACU010607/1-1028 GTPDSDITEK TEDSSVPETP ENERKASI-S YFKNQRGIQY IDLSSDSEDV ENSTTRP00000000211/1-1002 GTPDSDITEK TEDSSVPETP ENERKASI-S YFKNQRGIQY IDLSSDSEDV 151 200 ENSBTAP00000045084/1-1028 VSPNCSSTVQ EKKFNKDTVI IVSEPSEDEE SQGLPTMATR NNNDITNLKN bmy_17235T0/1-1072 VSPDCSSTVQ EKKFSKDTVI IVSEPSEDEE SQGLPTMAGR NNNDISELED ENSP00000351947/1-1028 VSPNCSNTVQ EKTFNKDTVI IVSEPSEDEE SQGLPTMA-R RNDDISELED BACU010607/1-1028 VSPDCSSTVQ EKKFSKDTVI IVSEPSEDEE SQGLPAMAGR NNNDISELED ENSTTRP00000000211/1-1002 VSPDCSSTVQ EKKFNKDTVI IVSEPSEDEE SQGLPTMAGR NNNDISELED 201 250 ENSBTAP00000045084/1-1028 LSFFPNYSDN LSTVRQTRYS ENLSSDLLKL IDSTSTMDGA IAAALLMFGD bmy_17235T0/1-1072 LSELEDLKDA KLQTLKELFP QRSDNDLLKI -------KSH ISEVL----- ENSP00000351947/1-1028 LSELEDLKDA KLQTLKELFP QRSDNDLLKL IESTSTMDGA IAAALLMFGD BACU010607/1-1028 LSELEDLKDA KLQTLKELFP QRSDSDLLKL IESTSTMDGA IAAALLMFGD ENSTTRP00000000211/1-1002 LSELEDLKDA KLQTLKELFP QRSDSDLLKL IESTSTMDGA IAAALLMFGD 251 300 ENSBTAP00000045084/1-1028 AEGGGPRKRK LSSSSEPFEE DEFNDDQSMK KKRLDHGEES NESAESSTNW bmy_17235T0/1-1072 REGGGPRKRK LSSSSEPFEE DEFNDDQSMK KKRLDQGEES NESAESSSNW ENSP00000351947/1-1028 A-GGGPRKRK LSSSSEPYEE DEFNDDQSIK KTRLDHGEES NESAESSSNW BACU010607/1-1028 AEGGGPRKRK LSSSSEPFEE DEFNDDQSMK KKRLDQGEES NESAESSSNW ENSTTRP00000000211/1-1002 A-GGGPRKRK LSSSSEPFEE DEFNDDQSMK KKRLDQGEES NESAESSSNW 301 350 ENSBTAP00000045084/1-1028 EKQESIVLKL QKEFPNFDKE ELREVLKEHE WMYTEALESL KVFAEDQDMQ bmy_17235T0/1-1072 EKQESIVLKL QKEFPNFDKE ELREVLKEHE WMYTEALESL KVFAEDQDMQ ENSP00000351947/1-1028 EKQESIVLKL QKEFPNFDKQ ELREVLKEHE WMYTEALESL KVFAEDQDMQ BACU010607/1-1028 EKQESIVLKL QKEFPNFDKE ELREVLKEHE WMYTEALESL KVFAEDQDMQ ENSTTRP00000000211/1-1002 EKQESIVLKL QKEFPNFDKE ELREVLKEHE WMYTEALESL KVFAEDQDMQ 351 400 ENSBTAP00000045084/1-1028 YASPSEFPNG KEVSSRSQNY PKNAAKTKLK QKCSMKPQNG FNKKRKKNVF bmy_17235T0/1-1072 YASPSEFPNG KEISSRSQNY PKNAAKTKLK QKCSMKPQNG FNKKRKKNVF ENSP00000351947/1-1028 YVSQSEVPNG KEVSSRSQNY PKNATKTKLK QKFSMKAQNG FNKKRKKNVF BACU010607/1-1028 YASPSEFPNG KEISSRSQNY PKNAAKTKLK QKCSMKPQNG FNKKRKKNVF ENSTTRP00000000211/1-1002 YASPSEFPNG KEVSSRSQNY PKNAAKTKLK QKCSMKPQNG FNKKRKKTVF 401 450 ENSBTAP00000045084/1-1028 NPKRVIEDSE YDSGSDVGSS LDEDYSSGEE VMEDGYKGKI LHFLQDASIG bmy_17235T0/1-1072 NPKRVIEDSE YDSGSDVGSS LDEDYSSGEE VMEDGYKGKI LHFLQDASIG ENSP00000351947/1-1028 NPKRVVEDSE YDSGSDVGSS LDEDYSSGEE VMEDGYKGKI LHFLQDASIG BACU010607/1-1028 NPKRVIEDSE YDSGSDVGSS LDEDYSSGEE VMEDGYKGKI LHFLQDASIG ENSTTRP00000000211/1-1002 NPKRVIEDSE YDSGSDVGSS LDEDYSSGEE VMEDGYKGKI LHFLQDASIG 451 500 ENSBTAP00000045084/1-1028 ELTLIPQCSQ KKAQKITELR PFNSWEALFT KMSKTNGLSE DLIWHCKTLI bmy_17235T0/1-1072 ELTLIPQCSQ KKAQKITELR PFNSWEALFT KMSKTNGLSE DLIWHCKTLI ENSP00000351947/1-1028 ELTLIPQCSQ KKAQKITELR PFNSWEALFT KMSKTNGLSE DLIWHCKTLI BACU010607/1-1028 ELTLIPQCSQ KKAQKITELR PFNSWEALFT KMSKTNGLSE DLIWHCKTLI ENSTTRP00000000211/1-1002 ELTLIPQCSQ KKAQKITELR PFNSWEALFT KMSKTNGLSE DLIWHCKTLI 501 550 ENSBTAP00000045084/1-1028 QERDVVIKLM NKCEDISNKL TKQVTMLTGN GGGWNTEQPS ILNQSLSLKP bmy_17235T0/1-1072 QERDVVIRLM NKCEDISNKL TKQVTMLTGN GGGWNIEQPS ILNQSLSLKP ENSP00000351947/1-1028 QERDVVIRLM NKCEDISNKL TKQVTMLTGN GGGWNIEQPS ILNQSLSLKP BACU010607/1-1028 QERDVVIRLM NKCEDISNKL TKQVTMLTGN GGGWNIEQPS ILNQSLSLKP ENSTTRP00000000211/1-1002 QERDVVIRLM NKCEDISNKL TKQVTMLTGN GGGWNIEQPS ILNQSLSLKP 551 600 ENSBTAP00000045084/1-1028 YQKVGLNWLA LVHKHGLNGI LADEMGLGKT IQAIAFLAYL YQEGNKGPHL bmy_17235T0/1-1072 YQKVGLNWLA LVHKHGLNGI LADEMGLGKT IQAIAFLAYL YQEGNNGPHL ENSP00000351947/1-1028 YQKVGLNWLA LVHKHGLNGI LADEMGLGKT IQAIAFLAYL YQEGNNGPHL BACU010607/1-1028 YQKVGLNWLA LVHKHGLNGI LADEMGLGKT IQAIAFLAYL YQEGNNGPHL ENSTTRP00000000211/1-1002 YQKVGLNWLA LVHKHGLNGI LADEMGLGKT IQAIAFLAYL YQEGNKGPHL 601 650 ENSBTAP00000045084/1-1028 IVVPASTIDN WLREVNLWCP TLKVLCYYGS QEERKQIRYN IHSRYEEYNV bmy_17235T0/1-1072 IVVPASTIDN WLREVNLWCP TLKVLCYYGS QEERKQIRYN IHSKYEEYNV ENSP00000351947/1-1028 IVVPASTIDN WLREVNLWCP TLKVLCYYGS QEERKQIRFN IHSRYEDYNV BACU010607/1-1028 IVVPASTIDN WLREVNLWCP TLKVLCYYGS QEERKQIRYN IHSKYEEYNV ENSTTRP00000000211/1-1002 IVVPASTIDN WLREVNLWCP TLKVLCYYGS QEERKQIRYN IHSKYEEYNV 651 700 ENSBTAP00000045084/1-1028 IVTTYNCAIS SSDDRSLFRR LKLNYAIFDE GHMLKNMGSI RYQHLMTINA bmy_17235T0/1-1072 IVTTYNCAIS SSDDRSLFRR LKLNYAIFDE GHMLKNMGSI RYQHLMTINA ENSP00000351947/1-1028 IVTTYNCAIS SSDDRSLFRR LKLNYAIFDE GHMLKNMGSI RYQHLMTINA BACU010607/1-1028 IVTTYNCAIS SSDDRSLFRR LKLNYAIFDE GHMLKNMGSI RYQHLMTINA ENSTTRP00000000211/1-1002 IVTTYNCAIS SSDDRSLFRR LKLNYAIFDE GHMLKNMGSI RYQHLMTINA 701 750 ENSBTAP00000045084/1-1028 NNRLLLTGTP VQNNLLELMS LLNFVMPHMF SSSTSEIRRM FSSKTKPADE bmy_17235T0/1-1072 NNRLLLTGTP VQNNLLELMS LLNFVMPHMF SSSTSEIRRM FSSKTKSADE ENSP00000351947/1-1028 NNRLLLTGTP VQNNLLELMS LLNFVMPHMF SSSTSEIRRM FSSKTKSADE BACU010607/1-1028 NNRLLLTGTP VQNNLLELMS LLNFVMPHMF SSSTSEIRRM FSSKTKSADE ENSTTRP00000000211/1-1002 NNRLLLTGTP VQNNLLELMS LLNFVMPHMF SSSTSEIRRM FSSKTKSADE 751 800 ENSBTAP00000045084/1-1028 QSIYEKERIA HAKQIIKPFI LRRVKEEVLK QLPPKKDRIE LCAMSEKQEQ bmy_17235T0/1-1072 QSIYEKERIA HAKQIIKPFI LRRVKEEVLK QLPPKKDRIE LCAMSEKQGQ ENSP00000351947/1-1028 QSIYEKERIA HAKQIIKPFI LRRVKEEVLK QLPPKKDRIE LCAMSEKQEQ BACU010607/1-1028 QSIYEKERIA HAKQIIKPFI LRRVKEEVLK QLPPKKDRIE LCAMSEKQEQ ENSTTRP00000000211/1-1002 QTIYEKERIA HAKQIIKPFI LRRVKEEVLK QLPPKKDRIE LCAMSEKQEQ 801 850 ENSBTAP00000045084/1-1028 LYMNLFNRLK KSINNM--EK NTEMCNVMMQ LRKMANHPLL HRQYYTAEKL bmy_17235T0/1-1072 LYLGLFNRLK KSINNM--EK NTEMCNVMMQ LRKMANHPLL HRQYYTAEKL ENSP00000351947/1-1028 LYLGLFNRLK KSINNLVTEK NTEMCNVMMQ LRKMANHPLL HRQYYTAEKL BACU010607/1-1028 LYLGLFNRLK KSINNM--EK NTEMCNVMMQ LRKMANHPLL HRQYYTAEKL ENSTTRP00000000211/1-1002 LYLGLFNRLK KSINNM-TEK NTEMCNVMMQ LRKMANHPLL HRQYYTAEKL 851 900 ENSBTAP00000045084/1-1028 KEMSQLMLKE PTHCEANPDL IFEDMEVMTD FELHVLCKQY RHINNFQLDM bmy_17235T0/1-1072 KEMSQLMLKE PTHCEANPDL IFEDMEVMTD FELHVLCKQY RHINNFQLDM ENSP00000351947/1-1028 KEMSQLMLKE PTHCEANPDL IFEDMEVMTD FELHVLCKQY RHINNFQLDM BACU010607/1-1028 KEMSQLMLKE PTHCEANPDL IFEDMEVMTD FELHVLCKQY RHINNFQLDM ENSTTRP00000000211/1-1002 KEMSQLMLKE PTHCEANPDL IFEDMEVMTD FELHVLCKQY RHINNFQLDM 901 950 ENSBTAP00000045084/1-1028 DLILDSGKFR VLGCILSELK QKGDRVVLFS QFTMMLDILE VLLKHHQHRY bmy_17235T0/1-1072 DLILDSGKFR VLGCILSELK QKGDRVVLFS QFTMMLDILE VLLKHHQHRY ENSP00000351947/1-1028 DLILDSGKFR VLGCILSELK QKGDRVVLFS QFTMMLDILE VLLKHHQHRY BACU010607/1-1028 DLILDSGKFR VLGCILSELK QKGDRVVLFS QFTMMLDILE VLLKHHQHRY ENSTTRP00000000211/1-1002 DLILDSGKFR VLGCILSELK QKGDRVVLFS QFTMMLDILE VLLKHHQHRY 951 1000 ENSBTAP00000045084/1-1028 LRLDGKTQIS ERIHLIDEFN TDMDIFVFLL STKAGGLGIN LTSANVVILH bmy_17235T0/1-1072 LRLDGKTQIS ERIHLIDEFN TDMDIFVFLL STKAGGLGIN LTSANVVILH ENSP00000351947/1-1028 LRLDGKTQIS ERIHLIDEFN TDMDIFVFLL STKAGGLGIN LTSANVVILH BACU010607/1-1028 LRLDGKTQIS ERIHLIDEFN TDMDIFVFLL STKAGGLGIN LTSANVVILH ENSTTRP00000000211/1-1002 LRLDGKTQIS ERIHLIDEFN TDMDIFVFLL STKAGGLGIN LTSANVVILH 1001 1050 ENSBTAP00000045084/1-1028 DIDCNPYNDK QAEDRCHRVG QTKEVLVIKL IGQGTIEESM LKINQQKLKL bmy_17235T0/1-1072 DIDCNPYNDK QAEDRCHRVG QTKEVLVIKL IGQGTIEESM LKINQQKLKL ENSP00000351947/1-1028 DIDCNPYNDK QAEDRCHRVG QTKEVLVIKL ISQGTIEESM LKINQQKLKL BACU010607/1-1028 DIDCNPYNDK QAEDRCHRVG QTKEVLVIKL IGQGTIEESM LKINQQKLKL ENSTTRP00000000211/1-1002 DIDCNPYNDK QAEDRCHRVG QTKEVLVIKL IGQGTIEESM LKINQQKLKL 1051 1100 ENSBTAP00000045084/1-1028 EQDMTTVDEG DEGSMPADIA TL------LK TSMGL---- bmy_17235T0/1-1072 EQDMTTVDEG K---LFVSIN FIYMKRHQLS SSKGIIKMV ENSP00000351947/1-1028 EQDMTTVDEG DEGSMPADIA TL------LK TSMGL---- BACU010607/1-1028 EQDMTTVDEG DEGSMPADIA TL------LK TSMGL---- ENSTTRP00000000211/1-1002 EQDMTTVDEG DEGSMPADIA TL------LK TSMGL----