KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:47 2014 Check: 00 .. Name: ENSTTRP00000014115/1-315 Len: 317 Check: 8404 Weight: 1.00 Name: bmy_00485T0/1-230 Len: 317 Check: 6203 Weight: 1.00 Name: ENSP00000297578/1-315 Len: 317 Check: 1871 Weight: 1.00 Name: BACU004812/1-315 Len: 317 Check: 1644 Weight: 1.00 Name: ENSBTAP00000045203/1-317 Len: 317 Check: 6566 Weight: 1.00 // 1 50 ENSTTRP00000014115/1-315 MTGQGQSASG SSAW-STVFR HVRYENLVAG VTGGVLSNLA LHPLDLVKIR bmy_00485T0/1-230 MA-------- ---------- ---------- ---------- --PIQIFIQL ENSP00000297578/1-315 MTGQGQSASG SSAW-STVFR HVRYENLIAG VSGGVLSNLA LHPLDLVKIR BACU004812/1-315 MTGQGQSASG SSAW-STVFR HVRYENLVAG VSGGVLSNLA LHPLDLVKIR ENSBTAP00000045203/1-317 MTGQGQSASG LSAWSSTIFR HVRYENLVAG VSGGVLSNLA LHPLDLVKIR 51 100 ENSTTRP00000014115/1-315 FAVSDGLELR PKYKGVLHCL TTIWKLDGLR GLYQGVTPNV WGAGLSWGLY bmy_00485T0/1-230 FMFNS----- ---------- ---------- ---------- ---------- ENSP00000297578/1-315 FAVSDGLELR PKYNGILHCL TTIWKLDGLR GLYQGVTPNI WGAGLSWGLY BACU004812/1-315 FAVSDGLELR PKYKGVLHCL TTIWKLDGLR GLYQGVAPNV WGAGLSWGLY ENSBTAP00000045203/1-317 FAVSDGLELR PKYKGILHCL TTIWKLDGLR GLYQGVTPNV WGAGLSWGLY 101 150 ENSTTRP00000014115/1-315 FFFYNAIKSY KTEGRAERLE ATEYLISAAE AGAMTLCITN PLWVTKTRLM bmy_00485T0/1-230 -FSYNAIKSY KTEGRAERLE ATEYLVSAAE AGAMTLCITN PLWVTKTRLM ENSP00000297578/1-315 FFFYNAIKSY KTEGRAERLE ATEYLVSAAE AGAMTLCITN PLWVTKTRLM BACU004812/1-315 FFFYNAIKSY KTEGRAERLE ATEYLVSAAE AGAMTLCITN PLWVTKTRLM ENSBTAP00000045203/1-317 FFFYNAIKSY KTEGRAERLE ATEYLISAAE AGAMTLCITN PLWVTKTRLM 151 200 ENSTTRP00000014115/1-315 LQYDGVVNAS QRQYKGMFDT LLKIYKYEGV RGLYKGFIPG LFGTSHGALQ bmy_00485T0/1-230 LQYDGVVNAS QRQYKGMFDT LLKIYKYEGV RGLYKGFIPG LFGTSHGALQ ENSP00000297578/1-315 LQYDAVVNSP HRQYKGMFDT LVKIYKYEGV RGLYKGFVPG LFGTSHGALQ BACU004812/1-315 LQYDGVVNAS QRQYKGMFDT LLKIYKYEGV RGLYKGFIPG LFGTSHGALQ ENSBTAP00000045203/1-317 LQYDSVVNAS QRQYKGMFDT LVKIYKYEGV RGLYKGFIPG LFGTSHGALQ 201 250 ENSTTRP00000014115/1-315 FMAYELLKLK YNQHTNRLPE AQLSTVEYIS VAALSKIFAV AATYPYQVXX bmy_00485T0/1-230 FMAYELLKLK YNQHTNRLPE AQLSTVEYIS VAALSKIFAV AATYPYQVVR ENSP00000297578/1-315 FMAYELLKLK YNQHINRLPE AQLSTVEYIS VAALSKIFAV AATYPYQVVR BACU004812/1-315 FMAYELLKLK YNQHTNRLPE AQLSTVEYIS VAALSKIFAV AATYPYQVVR ENSBTAP00000045203/1-317 FMAYELLKLK YNQHINRLPE AQLSTVEYIS VAALSKIFAV AATYPYQVIR 251 300 ENSTTRP00000014115/1-315 XXXXXXXXXX XXXXXXXXXX XXKEGIGGFY KGIAPNLIRV TPACCITFVV bmy_00485T0/1-230 ARLQDQHMFY NGVLDVITKT WRKEGXGGFY KGIAPNLIRV TPACCITFVV ENSP00000297578/1-315 ARLQDQHMFY SGVIDVITKT WRKEGVGGFY KGIAPNLIRV TPACCITFVV BACU004812/1-315 ARLQDQHMFY NGVLDVITKT WRKEGISGFY KGIAPNLIRV TPACCITFVV ENSBTAP00000045203/1-317 ARLQDQHMFY NGVLDVMTKT WRKEGISGFY KGIAPNLIRV TPACCITFVV 301 350 ENSTTRP00000014115/1-315 YENISHFLLG LREKKK- bmy_00485T0/1-230 YENVSHFLLG LREKKK- ENSP00000297578/1-315 YENVSHFLLD LREKRK- BACU004812/1-315 YENVSHFLLG LREKKK- ENSBTAP00000045203/1-317 YENVSHFLLG LRKDDIN