KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:48 2014 Check: 00 .. Name: ENSP00000455079/1-239 Len: 380 Check: 3356 Weight: 1.00 Name: bmy_06753T0/1-282 Len: 380 Check: 6238 Weight: 1.00 Name: ENSTTRP00000008313/1-155 Len: 380 Check: 5380 Weight: 1.00 Name: BACU004311/1-259 Len: 380 Check: 5450 Weight: 1.00 Name: ENSBTAP00000045246/1-213 Len: 380 Check: 2711 Weight: 1.00 // 1 50 ENSP00000455079/1-239 ---------- ---------- ---------- -----MRASR SPPSPRRCHH bmy_06753T0/1-282 MEAGAGGHAV PGLQGPDGGR GAVSSPISLS TQEDVTPRTS SGAQERDVRK ENSTTRP00000008313/1-155 ---------- ---------- ---------- ---------- -GQSPLRHRR BACU004311/1-259 ---------- ---------- ---------- ---------M RPESPGDCHL ENSBTAP00000045246/1-213 ---------- ---------- ---------- ---------L RGAGGRK--- 51 100 ENSP00000455079/1-239 HHE------- ---------- ---------- ---------- --------AT bmy_06753T0/1-282 APEPWAPPWY RHRPRHISQS PGGQEGATAV VSAATLPATR AGGLASRRIA ENSTTRP00000008313/1-155 HHE------- ---------- ---------- ---------- --------VT BACU004311/1-259 VENHW----- ---------- ---------- ---------- --------IA ENSBTAP00000045246/1-213 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000455079/1-239 GAASGAAAGG PGAGCVGLCR LALTPS---- -------AQD GRNSTFQTYK bmy_06753T0/1-282 GARSEEGKGS RDADVTATEE RSLGVSVSEG DDEAYGPTRK GERSTFQTFG ENSTTRP00000008313/1-155 RVAAGTSGSP R---VSVRCQ RALTPS---- ---------A DRRSTFQTFG BACU004311/1-259 GARSEEGKGS RDADVTATEE RSLGASVSEG DDEAYGPTRK GDRSTFQTFG ENSBTAP00000045246/1-213 --RWGFRGRG RSRGLTGRCE ---------- -----GRARR G--------- 151 200 ENSP00000455079/1-239 KEVCLPRHS- ---------- ---------- ---------- ---MHPGPWA bmy_06753T0/1-282 EEVCPIDHSV RKANLNYFAP TLTRLCGVGR AENVGPEAAS HERMCPAPSS ENSTTRP00000008313/1-155 EEVCSIDHS- ---------- ---------- ---------- ---MCPVPSS BACU004311/1-259 EEVCPIDHS- ---------- ---------- ---------- ---MCPAPSS ENSBTAP00000045246/1-213 ---------- ---------- ---------- ---------- ------VTRT 201 250 ENSP00000455079/1-239 -----ICCEC QTRFGGRLPV SRVEAALPYW VPLSLRPRKQ SQKTVQFPIP bmy_06753T0/1-282 VHREPICCEC QAKFGGRLPV RRAEA----- ---------- ---------- ENSTTRP00000008313/1-155 VHREPICCEC QAKFGGRLPV RRAEAVLPYW VPLSLRPRKQ ---------- BACU004311/1-259 VHREPICCEC QAKFGGRLPV RRAEAVLPYW VPLSLTPKAG IQKMVRFYVP ENSBTAP00000045246/1-213 VHLEPICCEC QAKFGGYLPV PRAKAALPYW VPRSLRPQNQ IQKMVRSYIP 251 300 ENSP00000455079/1-239 QTAKMCPCLC HRFGGRLPMP RDQAVMPYWV PQVLRSQQQI VRRQQSLKGI bmy_06753T0/1-282 KSPWTCA--- ------LGTT AGESVT---- ---------- AKGAVSSSGS ENSTTRP00000008313/1-155 KSPWMCA--- ------LGTT TGESVM---- ---------- VKGAVSSSGS BACU004311/1-259 KTTKACPCPC HHFGGRLPMS RDQAMMPYWV PQVLRSHKKV VKRLQSFKGI ENSBTAP00000045246/1-213 KTTKACPCPC HRFGGHLPMP RDQAVMPYWV PQVLRSHKKV VKRQQSFKGV 301 350 ENSP00000455079/1-239 QAPLLDACCW HNCWRIC-GD ECLLSKFQQL QAPYQ----- -DQLPAPAAR bmy_06753T0/1-282 SSRP------ FTRLSRW-PR GSQQASR--- ---------- ---PPSCPSA ENSTTRP00000008313/1-155 SSRP------ FTRLRRC-PQ GSQQASW--- ---------- ---PSAS--- BACU004311/1-259 PEVPLDVRSG YNRWRICDGE GRCLLKWQQL QVLHQAEPVA PGQPASLPAS ENSBTAP00000045246/1-213 PEAPLDVRSG YNRWRIC-GE GRHLLKWQQL QALHQAGPVA SGQPESPPAS 351 400 ENSP00000455079/1-239 LLP----LGL LTLLQAIPRV IMAIRQCFGV bmy_06753T0/1-282 SAS------- ---------- ---------- ENSTTRP00000008313/1-155 ---------- ---------- ---------- BACU004311/1-259 LLPLSLSLSL LTLLQALLSV IVAIL----- ENSBTAP00000045246/1-213 LLP--LNLSL LTLLHALLRV MEAIRQLFWV