KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:48 2014 Check: 00 .. Name: bmy_16732T0/1-310 Len: 569 Check: 1147 Weight: 1.00 Name: BACU017853/1-481 Len: 569 Check: 7885 Weight: 1.00 Name: ENSP00000284202/1-320 Len: 569 Check: 7020 Weight: 1.00 Name: ENSTTRP00000013865/1-319 Len: 569 Check: 2959 Weight: 1.00 Name: ENSBTAP00000045263/1-318 Len: 569 Check: 2125 Weight: 1.00 // 1 50 bmy_16732T0/1-310 MFRGFDDQKP QQPPSLVPKF KTKTTKEIAS RYGSACIFWL SSGQKHSDVV BACU017853/1-481 ---------- ---------- ---------- ---------- ---------- ENSP00000284202/1-320 ---------- ---------- ---------- ---------M AEGDAGSD-- ENSTTRP00000013865/1-319 ---------- ---------- ---------- ---------M AEGDAWSD-- ENSBTAP00000045263/1-318 ---------- ---------- ---------- ---------M AEGDTGSD-- 51 100 bmy_16732T0/1-310 AGLVPVIAIV SGTQRNEEIE AMAAIYGEEW CVIDDCAKIF CIRISDDIDD BACU017853/1-481 ---------- ---------- -MAAIYGEEW CVIDDCAKIF CIRISDDIDD ENSP00000284202/1-320 ---------- --QRQNEEIE AMAAIYGEEW CVIDDCAKIF CIRISDDIDD ENSTTRP00000013865/1-319 ---------- --QRQNEEIE AMAAIYGEEW CVIDDCAKIF CIRISDDIDD ENSBTAP00000045263/1-318 ---------- --QRQNEEIE AMAAIYGEEW CVIDDCAKIF CIRISDDIDD 101 150 bmy_16732T0/1-310 PKWTLCLQVM LPNEYPVLLG FKGKNVQIYR IALRKY---- ---------- BACU017853/1-481 PKWTLCLQ-- ---------- --GKNVQIYR IALRKYISLH ILMYHEVLDL ENSP00000284202/1-320 PKWTLCLQVM LPNEYP---- --GTAPPIYQ LNAPWLKGQE RADLSNSLE- ENSTTRP00000013865/1-319 PKWTLCLQVM LPNEYP---- --GTAPPIYQ LNAPWLQGQE RADLSNSLE- ENSBTAP00000045263/1-318 PKWTLCLQVM LPNEYP---- --GTAPPIYQ LNAPWLKGQE RADLSNSLE- 151 200 bmy_16732T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU017853/1-481 ELGEENIGES ILYLWVEKIR DVLIQKSQMT EPVPDVKKKT EEEDIECEDD ENSP00000284202/1-320 EIYIQNIGES ILYLWVEKIR DVLIQKSQMT EPGPDVKKKT EEEDVECEDD ENSTTRP00000013865/1-319 EIYIQNIGES ILYLWVEKIR DVLIQKSQMT EPGPDVKKKT EEEDIECEDD ENSBTAP00000045263/1-318 EIYIQNIGES ILYLWVEKIR DVLIQKSQMT EPGPDVKKKT EEEDVECEDD 201 250 bmy_16732T0/1-310 --ISCQPENP VKALDFDVSE NRT--EIEEL PPIDHGIPIT DRRSTFQAHL BACU017853/1-481 LILACQPENP VKALDFDVSE NRT--EIEEL PPIDHGIPIT DRRSTFQAHL ENSP00000284202/1-320 LILACQPESS LKALDFDISE TRTEVEVEEL PPIDHGIPIT DRRSTFQAHL ENSTTRP00000013865/1-319 LILACQPENP VKALDFDVSE NRT-IEIEEL PPIDHGIPIT DRRSTFQAHL ENSBTAP00000045263/1-318 LVLACQPENQ VKTLDFDVSE NRT--EIEEL PPIDHGIPIT DRRSTFQAHL 251 300 bmy_16732T0/1-310 APVVCPKQVK MVLAKLYENK KIASATHNIY AYRIYCEDKQ TFLQDCEDDG BACU017853/1-481 APVVCPKQVK MVLAKLYENK KIASATHNIY AYRIYCEDKQ TFLQDCEDDG ENSP00000284202/1-320 APVVCPKQVK MVLSKLYENK KIASATHNIY AYRIYCEDKQ TFLQDCEDDG ENSTTRP00000013865/1-319 APVVCPKQVK MVLAKLYENK KIASATHNIY AYRIYCEDKQ TFLQDCEDDG ENSBTAP00000045263/1-318 APVVCPKQVK MVLAKLYENK KIASATHNIY AYRIYCEDKQ TFLQDCEDDG 301 350 bmy_16732T0/1-310 ETAAGGRLLH LMEEESSKT- ---------- --LGKNKKRS NILTCMSKPV BACU017853/1-481 ETAAGGRLLH LMEILNVRNV MVVVSRWYGG ILLGPDRFK- HINNCARNIL ENSP00000284202/1-320 ETAAGGRLLH LMEILNVKNV MVVVSRWYGG ILLGPDRFK- HINNCARNIL ENSTTRP00000013865/1-319 ETAAGGRLLH LMEILNVRNV MVVVSRWYGG ILLGPDRFK- HINNCARNIL ENSBTAP00000045263/1-318 ETAAGGRLLH LMEILNVRDV MVVVSRWYGG VLLGPDRFK- HINNCARNIL 351 400 bmy_16732T0/1-310 KEDIKQLKKP NILC------ ---------- --PKSDS--- ---------- BACU017853/1-481 VEKNYTSSPL SLLYYVSSSF DVMPATNDTT DLPSETSIAL AFLMSLLAFA ENSP00000284202/1-320 VEKNYTNS-- ---------- ---------- --PEESSKAL G--------- ENSTTRP00000013865/1-319 VEKNYTSS-- ---------- ---------- --PEESSKTL G--------- ENSBTAP00000045263/1-318 VEKNYTNS-- ---------- ---------- --PEESSKAL G--------- 401 450 bmy_16732T0/1-310 ---------- -----KKERP KSLQFWNGL- ---------- ---------- BACU017853/1-481 IMVGNAVVIL AFVVDKNLRH RSNYFFLNLA ISDFFVGEEM SVYVENAPVG ENSP00000284202/1-320 ---------- -----KNKKV R--------- ---------- ---------- ENSTTRP00000013865/1-319 ---------- -----KNKKV R--------- ---------- ---------- ENSBTAP00000045263/1-318 ---------- -----KNKKV R--------- ---------- ---------- 451 500 bmy_16732T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU017853/1-481 NTGSHNSGPK YNKFLCFEDT SIYLRCDLHS LYIPHRLFNW KFEDNICAFW ENSP00000284202/1-320 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013865/1-319 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045263/1-318 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_16732T0/1-310 ---------- ---------- ---------- ---------- ---------- BACU017853/1-481 LTIDYLLCTT SVYNIVLISF DRYQSVSNAD GTLWVIRKTH RLLNVMRKLI ENSP00000284202/1-320 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013865/1-319 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045263/1-318 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_16732T0/1-310 -EEATLFER- --------- BACU017853/1-481 LHDQRKRQYT GKLRVIQWH ENSP00000284202/1-320 -KDKKRNEH- --------- ENSTTRP00000013865/1-319 -KDKKRSEH- --------- ENSBTAP00000045263/1-318 -KDKKRSEH- ---------