KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:48 2014 Check: 00 .. Name: ENSTTRP00000009664/1-393 Len: 425 Check: 1309 Weight: 1.00 Name: ENSP00000302486/1-393 Len: 425 Check: 4409 Weight: 1.00 Name: ENSBTAP00000045293/1-393 Len: 425 Check: 4409 Weight: 1.00 Name: bmy_10380T0/1-204 Len: 425 Check: 6636 Weight: 1.00 Name: BACU001077/1-411 Len: 425 Check: 4660 Weight: 1.00 // 1 50 ENSTTRP00000009664/1-393 ---MPKKKPT XXXXXXXXXX XXXX------ ---------X XXXXXTNLEA ENSP00000302486/1-393 ---MPKKKPT PIQLNPAPDG SAVN------ -GTSSAE--- -----TNLEA ENSBTAP00000045293/1-393 ---MPKKKPT PIQLNPAPDG SAVN------ -GTSSAE--- -----TNLEA bmy_10380T0/1-204 MGPSPELPRS VLSLAPELEL STARVLLWVD FSDDSVDPCF LLWDRTNLEA BACU001077/1-411 MGPSPELPRS VLSLAPELEL STARVLLWVD FSDNSVDPCF LLWDRTNLEA 51 100 ENSTTRP00000009664/1-393 LQKKLEELEL DEQQRKRLEA FLTQKQKVGE LKDDDFEKIS ELGAGNGGVV ENSP00000302486/1-393 LQKKLEELEL DEQQRKRLEA FLTQKQKVGE LKDDDFEKIS ELGAGNGGVV ENSBTAP00000045293/1-393 LQKKLEELEL DEQQRKRLEA FLTQKQKVGE LKDDDFEKIS ELGAGNGGVV bmy_10380T0/1-204 LQKKLEELEL DEQQRKRLEA FLTQKQKVGE LKDDDFEKIS ELGAGNGGVV BACU001077/1-411 LQKKLEELEL DEQQRKRLEA FLTQKQKVGE LKDDDFEKIS ELGAGNGGVV 101 150 ENSTTRP00000009664/1-393 FKVSHKPSGL VMARKLIHLE IKPAIRNQII RELQVLHECN SPYIVGFYGA ENSP00000302486/1-393 FKVSHKPSGL VMARKLIHLE IKPAIRNQII RELQVLHECN SPYIVGFYGA ENSBTAP00000045293/1-393 FKVSHKPSGL VMARKLIHLE IKPAIRNQII RELQVLHECN SPYIVGFYGA bmy_10380T0/1-204 FKVSHKPSGL VMARKLIHLE IKPAIRNQII RELQVLHECN SPYIVGFYGA BACU001077/1-411 FKVSHKPSGL VMARKLIHLE IKPAIRNQII RELQVLHECN SPYIVGFYGA 151 200 ENSTTRP00000009664/1-393 FYSDGEISIC MEHM------ --------DG GSLDQVLKKA GRIPEQILGK ENSP00000302486/1-393 FYSDGEISIC MEHM------ --------DG GSLDQVLKKA GRIPEQILGK ENSBTAP00000045293/1-393 FYSDGEISIC MEHM------ --------DG GSLDQVLKKA GRIPEQILGK bmy_10380T0/1-204 FYSDGEISIC MEHMVCGNLS ASEAAAWEDG GSLDQVLKKA GRIPEQILGK BACU001077/1-411 FYSDGEISIC MEHM------ --------DG GSLDQVLKKA GRIPEQILGK 201 250 ENSTTRP00000009664/1-393 VSIAVIKGLT YLREKHKIMH RDVKPSNILV NSRGEIKLCD FGVSGQLIDS ENSP00000302486/1-393 VSIAVIKGLT YLREKHKIMH RDVKPSNILV NSRGEIKLCD FGVSGQLIDS ENSBTAP00000045293/1-393 VSIAVIKGLT YLREKHKIMH RDVKPSNILV NSRGEIKLCD FGVSGQLIDS bmy_10380T0/1-204 VSIA------ ---------- ---------- ---------- ---------- BACU001077/1-411 VSIAVIKGLT YLREKHKIMH RDVKPSNILV NSRGEIKLCD FGVSGQLIDS 251 300 ENSTTRP00000009664/1-393 MANSFVGTRS YMSPERLQGT XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000302486/1-393 MANSFVGTRS YMSPERLQGT HYSVQSDIWS MGLSLVEMAV GRYPIPPPDA ENSBTAP00000045293/1-393 MANSFVGTRS YMSPERLQGT HYSVQSDIWS MGLSLVEMAV GRYPIPPPDA bmy_10380T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU001077/1-411 MANSFVGTRS YMSPERLQGT HYSVQSDIWS MGLSLVEMAV GRYPIPPPDA 301 350 ENSTTRP00000009664/1-393 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XYGMDSRPPM AIFELLDYIV ENSP00000302486/1-393 KELELMFGCQ VEGDAAETPP RPRTPGRPLS SYGMDSRPPM AIFELLDYIV ENSBTAP00000045293/1-393 KELELMFGCQ VEGDAAETPP RPRTPGRPLS SYGMDSRPPM AIFELLDYIV bmy_10380T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU001077/1-411 KELELMFGCQ VEGDAAETPP RPRTPGRPLS SYGMDSRPPM AIFELLDYIV 351 400 ENSTTRP00000009664/1-393 NEPPPKLPSG VFSLEFQDFV NKCLIKNPAE RADLKQLMVH AFIKRSDAEE ENSP00000302486/1-393 NEPPPKLPSG VFSLEFQDFV NKCLIKNPAE RADLKQLMVH AFIKRSDAEE ENSBTAP00000045293/1-393 NEPPPKLPSG VFSLEFQDFV NKCLIKNPAE RADLKQLMVH AFIKRSDAEE bmy_10380T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU001077/1-411 NEPPPKLPSG VFSLEFQDFV NKCLIKNPAE RADLKQLMVH AFIKRSDAEE 401 450 ENSTTRP00000009664/1-393 VDFAGWLCST IGLNQPSTPT HVAGI ENSP00000302486/1-393 VDFAGWLCST IGLNQPSTPT HAAGV ENSBTAP00000045293/1-393 VDFAGWLCST IGLNQPSTPT HAAGV bmy_10380T0/1-204 ---------- ---------- ----- BACU001077/1-411 VDFAGWLCST IGLNQPSTPT HAAGI