KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:49 2014 Check: 00 .. Name: ENSBTAP00000045300/1-504 Len: 504 Check: 1863 Weight: 1.00 Name: ENSP00000280612/1-501 Len: 504 Check: 9615 Weight: 1.00 Name: ENSTTRP00000015526/1-502 Len: 504 Check: 4477 Weight: 1.00 Name: BACU004170/1-503 Len: 504 Check: 9027 Weight: 1.00 Name: bmy_18091T0/1-435 Len: 504 Check: 8016 Weight: 1.00 // 1 50 ENSBTAP00000045300/1-504 MVRKPVVSTI SSGAYLQGSV NGRLPALGGR EPPGQEKVVL KKKITLLRGI ENSP00000280612/1-501 MVRKPVVSTI SKGGYLQGNV NGRLPSLGNK EPPGQEKVQL KRKVTLLRGV ENSTTRP00000015526/1-502 MVRKAVASTI SNGSYLQGSV NTRLSS-GGK EPPGQEKVVL KRKISLLRGI BACU004170/1-503 MVRKPAASTI SNGGYLQGSV KARLSFPGGK EPPGQEKVVL KRKISLLRGV bmy_18091T0/1-435 MVRKPVASTI SNAGYLQGSV NARLSSLGGK EPPGQEKVVL KRKISLLRGI 51 100 ENSBTAP00000045300/1-504 SIIIGTIIGA GIFISPKGVL QNTGSVGLSL VVWTVCGVLS LFGALSYAEL ENSP00000280612/1-501 SIIIGTIIGA GIFISPKGVL QNTGSVGMSL TIWTVCGVLS LFGALSYAEL ENSTTRP00000015526/1-502 SIIIGTIIGA GIFISHKGVL QNTGSVGLSL VVWTVCGVLS LFGALSYAEL BACU004170/1-503 SIIIGTIIGA GIFISPKGVL QNTGSVGLSL VVWTVCGVLS LFGALSYAEL bmy_18091T0/1-435 SIIIGTIIGA GIFISPKGVL QNTGSVGLSL VVWTVCGVLS LFGALSYAEL 101 150 ENSBTAP00000045300/1-504 GTSIKKSGGH YTYILEVFGP LPAFVRVWVE LLIIRQPIAT SLDSISFGIS ENSP00000280612/1-501 GTTIKKSGGH YTYILEVFGP LPAFVRVWVE LLIIR-PAAT AVISLAFGRY ENSTTRP00000015526/1-502 GTTIKKSGGH YTYILEVFGP LPAFVRVWVE LLIIR-PAAT AVISLAFGRY BACU004170/1-503 GTTIRKSGGH YTYILEVFGP LPAFVRVWVE LLIIR-PAAT AVISLAFGRY bmy_18091T0/1-435 GTTIRKSGGH YTYILEVFGP LPAFVRVWVE LLIIR-PAAT AVISLAFGRY 151 200 ENSBTAP00000045300/1-504 ILEPFFKKKG IPQEVFSFIF VVCLAVVMVL NSMSVSWSAR IQIFLTFCKL ENSP00000280612/1-501 ILEPFFIQCE IPELAIKLIT AVGITVVMVL NSMSVSWSAR IQIFLTFCKL ENSTTRP00000015526/1-502 ILEPFFIQCE IPELAVKLIT AVGITVVMVL NSMSVSWSAR IQIFLTFCKL BACU004170/1-503 LLEPFFIQCE IPELAVKLIT AVGITMVMVL NSMSVSWSAR IQIFLTFCKL bmy_18091T0/1-435 LLEPFFIQCE IPELAVKLIT AVGITMVMVL NSMSVSWSAR IQIFLTFCKL 201 250 ENSBTAP00000045300/1-504 TAILIIIVPG VMQLIKGQTQ YFKDAFSGRD ASIMGLPLAF YYGMYAYAGW ENSP00000280612/1-501 TAILIIIVPG VMQLIKGQTQ NFKDAFSGRD SSITRLPLAF YYGMYAYAGW ENSTTRP00000015526/1-502 TAILIIIVPG VMQLIKGQTQ HFKDAFSGRD ASIMGLPLAF YYGMYAYAGW BACU004170/1-503 TAILIIIVPG VMQLIKGQTQ HFKDAFSGRD ASIMGLPLAF YYGMYAYAGW bmy_18091T0/1-435 TAILIIIVPG VMQLIKGQTQ HFKDAFSGRD ASIMGLPLAF YYGMYAYAGW 251 300 ENSBTAP00000045300/1-504 FYLNFVTEEV ENPEKTIPLA ICISMAIVTV GYVLTNVAYF TTISAEELML ENSP00000280612/1-501 FYLNFVTEEV ENPEKTIPLA ICISMAIVTI GYVLTNVAYF TTINAEELLL ENSTTRP00000015526/1-502 FYLNFVTEEV ENPEKTIPLA ICISMAVVTI GYVLTNVAYF TTISAEELLL BACU004170/1-503 FYLNFVTEEV ENPEKTIPLA ICISMAVVTV GYVLTNVAYF TTISAQELLL bmy_18091T0/1-435 FYLNFVTEEV ENPEKTIPLA ICISMAVVTV GYVLTNVAYF TTISAQELLL 301 350 ENSBTAP00000045300/1-504 SNAVAVTFSE RLLGNFSLAV PIFVALSCFG SMNGGVFAVS RLFYVASREG ENSP00000280612/1-501 SNAVAVTFSE RLLGNFSLAV PIFVALSCFG SMNGGVFAVS RLFYVASREG ENSTTRP00000015526/1-502 SEAVAVTFSE RLLGNFSVAV PIFVALSCFG SMNGGVFAVS RLFYVASREG BACU004170/1-503 SKAVAVTFSE RLLGNFSVAV PIFVALSCFG SMNGGVFAVS RLFYVASREG bmy_18091T0/1-435 SKAVAVTFSE RLLGNFSVAV PIFVALSCFG SMNGGVFAVS RLFYVASREG 351 400 ENSBTAP00000045300/1-504 HLPEILSMIH IRKHTPLPAV IVLHPLTMIM LFSGDLYSLL NFLSFARWLF ENSP00000280612/1-501 HLPEILSMIH VRKHTPLPAV IVLHPLTMIM LFSGDLDSLL NFLSFARWLF ENSTTRP00000015526/1-502 HLPEILSMIH IRKHTPLPAV IVLHPLTMVM LFSGDLYSLL NFLSFARWLF BACU004170/1-503 HLPEILSMIH IRKHTPVPAV IVLHPLTMIM LFSGDLYSLL NFLSFARWLF bmy_18091T0/1-435 HLPEILSMIH IRKHTPVAAV IVLHPLTMIM LFSGDLYSLL NFLSFARWLF 401 450 ENSBTAP00000045300/1-504 IGLAVAGLIY LRYKRPDMHR PFKVPLFIPA LFSFTCLFMV ALSLYSDPFS ENSP00000280612/1-501 IGLAVAGLIY LRYKCPDMHR PFKVPLFIPA LFSFTCLFMV ALSLYSDPFS ENSTTRP00000015526/1-502 IGLAVAGLIY LRYKRPDMHR PFKVPLFIPA LFSFTCLFMV ALSLYSDPFS BACU004170/1-503 IGLAVAGLIY LRYKHPDMHR PFKVPLFIPA LFSFTCLFMV ALSLYSDPFS bmy_18091T0/1-435 IGLAVAGLIY LRYKHPDMHR PFKV------ ---------- ---------- 451 500 ENSBTAP00000045300/1-504 TGIGFIITLT GIPAYYLFII WDKKPKWFRR MSDMITRTLQ IILEVVPEED ENSP00000280612/1-501 TGIGFVITLT GVPAYYLFII WDKKPRWFRI MSEKITRTLQ IILEVVPEED ENSTTRP00000015526/1-502 TGIGFIITLT GVPAYYLFII WDEKPRWFRR MSDITTRTLQ IILEVVPEED BACU004170/1-503 TGIGFTITLT GVPAYYLFII WDKKPRWFRR MSDITTRTLQ IILEVVPEED bmy_18091T0/1-435 ---------- -VPSYGIYFT LEK------- ---------- ---------- 501 550 ENSBTAP00000045300/1-504 CHKL ENSP00000280612/1-501 --KL ENSTTRP00000015526/1-502 CHKL BACU004170/1-503 CHKL bmy_18091T0/1-435 ----