KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:50 2014 Check: 00 .. Name: bmy_18059T0/1-1264 Len: 1362 Check: 7254 Weight: 1.00 Name: ENSBTAP00000045301/1-1311 Len: 1362 Check: 3203 Weight: 1.00 Name: ENSP00000354794/1-1311 Len: 1362 Check: 6452 Weight: 1.00 Name: ENSTTRP00000005007/1-1335 Len: 1362 Check: 8944 Weight: 1.00 Name: BACU017852/1-1091 Len: 1362 Check: 8603 Weight: 1.00 // 1 50 bmy_18059T0/1-1264 ---------- --------MA SD-------- ---------- --------PN ENSBTAP00000045301/1-1311 --------MS RRKQAKPRSL KD-------- ---------- --------PN ENSP00000354794/1-1311 --------MS RRKQAKPRSL KD-------- ---------- --------PN ENSTTRP00000005007/1-1335 FLSDYVQSES LRVRGPLWSH PDGFGGLASI FHXXXXXXXX XXXXXXXXPN BACU017852/1-1091 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_18059T0/1-1264 CELEDKTEDG EAGDCKKRPE DGEELEDEAV HSCDSCFQVF ESLSDITEHK ENSBTAP00000045301/1-1311 CKLEDKTEDG EAIDCKKRPE DGEELEDEAV HSCDSCLQVF ESLSDITEHK ENSP00000354794/1-1311 CKLEDKTEDG EALDCKKRPE DGEELEDEAV HSCDSCLQVF ESLSDITEHK ENSTTRP00000005007/1-1335 CELEDKTEDG EAGDCKKRPE DGEELEDEGV HSCDSCFQVF ESLSDITEHK BACU017852/1-1091 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_18059T0/1-1264 INRCQLTADR LDKEFVLNES PDKVYGVDVE DDPTCSWPAS SPSSKDQTSP ENSBTAP00000045301/1-1311 INQCQLTD-- ---------- -----GVDVE DDPTCSWPAS SPSSKDQTSP ENSP00000354794/1-1311 INQCQLTD-- ---------- -----GVDVE DDPTCSWPAS SPSSKDQTSP ENSTTRP00000005007/1-1335 INRCQLTD-- ---------- -----GVDVE DDPTCSWPAS SPSSKDQTSP BACU017852/1-1091 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_18059T0/1-1264 SHGEGCDFGE EEGGPGLPYP CQFCDKSFSR LSYLKHHEQS HSDKLPFKCT ENSBTAP00000045301/1-1311 SHGEGCDFGE EEGGPGLPYP CQFCDKSFSR LSYLKHHEQS HSDKLPFKCT ENSP00000354794/1-1311 SHGEGCDFGE EEGGPGLPYP CQFCDKSFSR LSYLKHHEQS HSDKLPFKCT ENSTTRP00000005007/1-1335 SHGEGCDFGE EEGGPGLPYP CQFCDKSFSR LSYLKHHEQS HSDKLPFKCT BACU017852/1-1091 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_18059T0/1-1264 YCSRLFKHKR SRDRHIKLHT GDKKYHCSEC DAAFSRSDHL KIHLKTHTSN ENSBTAP00000045301/1-1311 YCSRLFKHKR SRDRHIKLHT GDKKYHCSEC DAAFSRSDHL KIHLKTHTSN ENSP00000354794/1-1311 YCSRLFKHKR SRDRHIKLHT GDKKYHCSEC DAAFSRSDHL KIHLKTHTSN ENSTTRP00000005007/1-1335 YCSRLFKHKR SRDRHIKLHT GDKKYHCSEC DAAFSRSDHL KIHLKTHTSN BACU017852/1-1091 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_18059T0/1-1264 KPYKCAICRR GFLSSSSLHG HMQVHERNKD GPQGGSRMED WKMKDTQKCS ENSBTAP00000045301/1-1311 KPYKCAICRR GFLSSSSLHG HMQVHERNKD GSQSGSRMED WKMKDTQKCS ENSP00000354794/1-1311 KPYKCAICRR GFLSSSSLHG HMQVHERNKD GSQSGSRMED WKMKDTQKCS ENSTTRP00000005007/1-1335 KPYKCAICRR GFLSSSSLHG HMQVHERNKD GSQSGSRMED WKMKDTQKCS BACU017852/1-1091 ---------- ---------- -MQVHERNKD GPQGGSRMED WKMKDTQKCS 301 350 bmy_18059T0/1-1264 QCEEGFDFPE DLQKHIAECH PECSPNEDRA ALQCVYCHEL FVEEASLMNH ENSBTAP00000045301/1-1311 QCEEGFDFPE DLQKHIAECH PECSPNEDRA ALQCVYCHEL FVEETSLMNH ENSP00000354794/1-1311 QCEEGFDFPE DLQKHIAECH PECSPNEDRA ALQCVYCHEL FVEETSLMNH ENSTTRP00000005007/1-1335 QCEEGFDFPE DLQKHIAECH PECSPNEDRA ALQCVYCHEL FVEETSLMNH BACU017852/1-1091 QCEEGFDFPE DLQKHIAECH PECSPNEDRA ALQCVYCHEL FVEEASLMNH 351 400 bmy_18059T0/1-1264 MEQMHGGEKK NSCSICSESF HTVEELYSHM DGHQQPESCN PSNSPSLVTV ENSBTAP00000045301/1-1311 MEQMHGGEKK NSCSICSESF HSVEELYSHM DGHQQPESCN HSNSPSLVTV ENSP00000354794/1-1311 MEQVHSGEKK NSCSICSESF HTVEELYSHM DSHQQPESCN HSNSPSLVTV ENSTTRP00000005007/1-1335 MEQMHGGEKK NSCTICSESF HTVEELYSHM DSHQQPESCN HSNSPSLVTV BACU017852/1-1091 MEQMHGGEKK NSCSICSESF HTVEELYSHM DGHQQPESCN PSNSPSLVTV 401 450 bmy_18059T0/1-1264 GYTSVSSTTP DSNLSVDSST MVEAAPPIPK SRGRKRASQQ TPDMTVPSSK ENSBTAP00000045301/1-1311 GYTSVSSTTP DSNLSVDSST MVEAAPPIPK SRGRKRAAQQ TPDMTVPSSK ENSP00000354794/1-1311 GYTSVSSTTP DSNLSVDSST MVEAAPPIPK SRGRKRAAQQ TPDMTGPSSK ENSTTRP00000005007/1-1335 GYTSVSSTTP DSNLSVDSST MVEAAPPIPK SRGRKRASQQ TPDMTVPSSK BACU017852/1-1091 GYTSVSSTTP DSNLSVDSST MVEAAPPIPK SRGRKRASQQ TPDMTVPSSK 451 500 bmy_18059T0/1-1264 QAKVTYSCIY CNKQLFSSLA VLQIHLKTMH LDKPEQAHIC QYCLEVLPSL ENSBTAP00000045301/1-1311 QAKVTYSCIY CNKQLFSSLA VLQIHLKTMH LDKPEQAHIC QYCLEVLPSL ENSP00000354794/1-1311 QAKVTYSCIY CNKQLFSSLA VLQIHLKTMH LDKPEQAHIC QYCLEVLPSL ENSTTRP00000005007/1-1335 QAKVTYSCIY CNKQLFSSLA VLQIHLKTMH LDKPEQAHIC QYCLEVLPSL BACU017852/1-1091 QAKVTYSCIY CNKQLFSSLA VLQIHLKTMH LDKPEQAHIC QYCLEVLPSL 501 550 bmy_18059T0/1-1264 YNLNEHLKQV HEAQDPGLIV SAMPAIVYQC NFCSEVVNDL NTLQEHIRCS ENSBTAP00000045301/1-1311 YNLNEHLKQV HEAQDPGLIV SALPAIVYQC NFCSEVVNDL NTLQEHIRCS ENSP00000354794/1-1311 YNLNEHLKQV HEAQDPGLIV SAMPAIVYQC NFCSEVVNDL NTLQEHIRCS ENSTTRP00000005007/1-1335 YNLNEHLKQV HEAQDPGLIV SAMPAIVYQC NFCSEVVNDL NTLQEHIRCS BACU017852/1-1091 YNLNEHLKQV HEAQDPGLIV SAMPAIVYQC NFCSEVVNDL NTLQEHIRCS 551 600 bmy_18059T0/1-1264 HGFANPAAKD SNAFFCPHCY MGFLTDSSLE EHIRQVHCDL SGSRFGSPVL ENSBTAP00000045301/1-1311 HGFANPAAKD SNAFFCPHCY MGFLTDSSLE EHIRQVHCDL SGSRFGSPVL ENSP00000354794/1-1311 HGFANPAAKD SNAFFCPHCY MGFLTDSSLE EHIRQVHCDL SGSRFGSPVL ENSTTRP00000005007/1-1335 HGFANPAAKD SNAFFCPHCY MGFLTDSSLE EHIRQVHCDL SGSRFGSPVL BACU017852/1-1091 HGFANPAAKD SNAFFCPHCY MGFLTDSSLE EHIRQVHCDL SGSRFGSPVL 601 650 bmy_18059T0/1-1264 GTPKEPVVEV YSCSYCTNSP IFNSVLKLNK HIKENHKNIP LALNYIHNGK ENSBTAP00000045301/1-1311 GTPKEPVVEV YSCSYCTNSP IFNSVLKLNK HIKENHKNIP LALNYIHNGK ENSP00000354794/1-1311 GTPKEPVVEV YSCSYCTNSP IFNSVLKLNK HIKENHKNIP LALNYIHNGK ENSTTRP00000005007/1-1335 GTPKEPVVEV YSCSYCTNSP IFNSVLKLNK HIKENHKNIP LALNYIHNGK BACU017852/1-1091 GTPKEPVVEV YSCSYCTNSP IFNSVLKLNK HIKENHKNIP LALNYIHNGK 651 700 bmy_18059T0/1-1264 KSRALSPLSP VAIEQTSLKM MQAVGGAPAR PAGEYICNQC GAKYTSLDGF ENSBTAP00000045301/1-1311 KSRALSPLSP VAIEQTSLKM MQAVGGAPAR QAGEYICNQC GAKYTSLDGF ENSP00000354794/1-1311 KSRALSPLSP VAIEQTSLKM MQAVGGAPAR PTGEYICNQC GAKYTSLDSF ENSTTRP00000005007/1-1335 KSRALSPLSP VAIEQTSLKM MQAVGGAPAR PAGEYICNQC GAKYTSLDGF BACU017852/1-1091 KSRALSPLSP VAIEQTSLKM MQAVGGAPAR PAGEYICNQC GAKYTSLDGF 701 750 bmy_18059T0/1-1264 QTHLKTHLDT VLPKLTCPQC NKEFPNQESL LKHVTIHFMI TSTYYICESC ENSBTAP00000045301/1-1311 QTHLKTHLDT VLPKLTCPQC NKEFPNQESL LKHVTIHFMI TSTYYICESC ENSP00000354794/1-1311 QTHLKTHLDT VLPKLTCPQC NKEFPNQESL LKHVTIHFMI TSTYYICESC ENSTTRP00000005007/1-1335 QTHLKTHLDT VLPKLTCPQC NKEFPNQESL LKHVTIHFMI TSTYYICESC BACU017852/1-1091 QTHLKTHLDT VLPKLTCPQC NKEFPNQESL LKHVTIHFMI TSTYYICESC 751 800 bmy_18059T0/1-1264 DKQFTSVDDL QKHLLDMHTF VFFRCTLCQE VFDSKVSIQL HLAVKHSNEK ENSBTAP00000045301/1-1311 DKQFTSVDDL QKHLLDMHTF VFFRCTLCQE VFDSKVSIQL HLAVKHSNEK ENSP00000354794/1-1311 DKQFTSVDDL QKHLLDMHTF VFFRCTLCQE VFDSKVSIQL HLAVKHSNEK ENSTTRP00000005007/1-1335 DKQFTSVDDL QKHLLDMHTF VFFRCTLCQE VFDSKVSIQL HLAVKHSNEK BACU017852/1-1091 DKQFTSVDDL QKHLLDMHTF VFFRCTLCQE VFDSKVSIQL HLAVKHSNEK 801 850 bmy_18059T0/1-1264 KVYRCTSCNW DFRNETDLQL HVRHNHLENQ GKVHKCIFCG ESFGTEVELQ ENSBTAP00000045301/1-1311 KVYRCTSCNW DFRNETDLQL HVKHNHLENQ GKVHKCIFCG ESFGTEVELQ ENSP00000354794/1-1311 KVYRCTSCNW DFRNETDLQL HVKHNHLENQ GKVHKCIFCG ESFGTEVELQ ENSTTRP00000005007/1-1335 KVYRCTSCNW DFRNETDLQL HVKHNHLENQ GKVHKCIFCG ESFGTEVELQ BACU017852/1-1091 KVYRCTSCNW DFRNETDLQL HVKHNHLENQ GKVHKCIFCG ESFGTEVELQ 851 900 bmy_18059T0/1-1264 CHITTHSKKY NCKFCSKAFH AIILLEKHLR EKHCVFDAKT PNCGANGASE ENSBTAP00000045301/1-1311 CHITTHSKKY NCQFCSKAFH AIILLEKHLR EKHCVFDTKT PNCGANGASE ENSP00000354794/1-1311 CHITTHSKKY NCKFCSKAFH AIILLEKHLR EKHCVFETKT PNCGTNGASE ENSTTRP00000005007/1-1335 CHITTHSKKY NCKFCSKAFH AIILLEKHLR EKHCVFDAKT PNCGANGASE BACU017852/1-1091 CHITTHSKKY NCKFCSKAFH AIILLEKHLR EKHCVFDAKT PNCGANGASE 901 950 bmy_18059T0/1-1264 QVQKEEVELQ TLLTNSQESH NSHDGSEEDV DTSEPMYGCD ICGAAYTMET ENSBTAP00000045301/1-1311 PGQKEEVELQ TLLTNSQESH NSHDGSEEDV DTSEPMYGCD ICGAAYTMET ENSP00000354794/1-1311 QVQKEEVELQ TLLTNSQESH NSHDGSEEDV DTSEPMYGCD ICGAAYTMET ENSTTRP00000005007/1-1335 QAQKEEVELQ TLLTNSQESH NSHDGSEEDV DTSEPMYGCD ICGAAYTMET BACU017852/1-1091 QVQKEEVELQ TLLTNSQESH NSHDGSEEDV DTSEPMYGCD ICGAAYTMET 951 1000 bmy_18059T0/1-1264 LLQNHQLRDH NIRPGESAIV KKKAELIKGN YKCNVCSRTF FSENGLREHM ENSBTAP00000045301/1-1311 LLQNHQLRDH NIRPGESAIV KKKAELIKGN YKCNVCSRTF FSENGLREHM ENSP00000354794/1-1311 LLQNHQLRDH NIRPGESAIV KKKAELIKGN YKCNVCSRTF FSENGLREHM ENSTTRP00000005007/1-1335 LLQNHQLRDH NIRPGESAIV KKKAELIKGN YKCNVCSRTF FSENGLREHM BACU017852/1-1091 LLQNHQLRDH NIRPGESAIV KKKAELIKGN YKCNVCSRTF FSENGLREHM 1001 1050 bmy_18059T0/1-1264 QTHLGPVKHY MCPICGERFP SLLTLTEHKV THSKSLDTGN CRICKMPLQS ENSBTAP00000045301/1-1311 QTHLGPVKHY MCPICGERFP SLLTLTEHKV THSKSLDTGN CRICKMPLQS ENSP00000354794/1-1311 QTHLGPVKHY MCPICGERFP SLLTLTEHKV THSKSLDTGN CRICKMPLQS ENSTTRP00000005007/1-1335 QTHLGPVKHY MCPICGERFP SLLTLTEHKV THSKSLDTGN CRICKMPLQS BACU017852/1-1091 QTHLGPVKHY MCPICGERFP SLLTLTEHKV THSKSLDTGN CRICKMPLQS 1051 1100 bmy_18059T0/1-1264 EEEFLEHCQM HPDLRNSLTG FRCVVCMQTV TSTLELKIHG TFHMQKTGNG ENSBTAP00000045301/1-1311 EEEFLEHCQM HPDLRNSLTG FRCVVCMQTV TSTLELKIHG TFHMQKTGNG ENSP00000354794/1-1311 EEEFLEHCQM HPDLRNSLTG FRCVVCMQTV TSTLELKIHG TFHMQKTGNG ENSTTRP00000005007/1-1335 EEEFLEHCQM HPDLRNSLTG FRCVVCMQTV TSTLELKIHG TFHMQKTGNG BACU017852/1-1091 EEEFLEHCQM HPDLRNSLTG FRCVVCMQTV TSTLELKIHG TFHMQKTGNG 1101 1150 bmy_18059T0/1-1264 SAVQTTGRGQ HVPKLYKCAS CLKEFRSKQD LVKLDINGLP YGLCAGCVNL ENSBTAP00000045301/1-1311 ATVQATGRGP HVPKLYKCAS CLKEFRSKQD LVKLDINGLP YGLCAGCVNL ENSP00000354794/1-1311 SAVQTTGRGQ HVQKLYKCAS CLKEFRSKQD LVKLDINGLP YGLCAGCVNL ENSTTRP00000005007/1-1335 SAVQATGRGQ HVPKLYKCAS CLKEFRSKQD LVKLDINGLP YGLCAGCVNL BACU017852/1-1091 SAVQTTGRGQ HVPKLYKCAS CLKEFRSKQD LVKLDINGLP YGLCAGCVNL 1151 1200 bmy_18059T0/1-1264 SKSGSPGISI PPGTSRPGLG QNENLSAMEG KGKAGALKTR CSSCNVKFES ENSBTAP00000045301/1-1311 SKSASPGVNI APGSSRPGLG QTENLGAVEG KGKASAPKTR CSSCNVKFES ENSP00000354794/1-1311 SKSASPGINV PPGTNRPGLG QNENLSAIEG KGKVGGLKTR CSSCNVKFES ENSTTRP00000005007/1-1335 SKSGSPGISV PPGTSRPGLG QNENLSAMEG KGKAGALKTR CSSCNVKFES BACU017852/1-1091 SKSGSPGISN PPGTSRPGLG QNENLSAMEG KGKAGALKTR CSSCNVKFES 1201 1250 bmy_18059T0/1-1264 ESELQNHIQT VHRELVPDGN STQLKTPQVS PMPRISPSQS DEKKTYQCIK ENSBTAP00000045301/1-1311 ESELQNHIQT VHRELVPDSN STQLKTPQVS PMPRISPSQS DEKKTYQCIK ENSP00000354794/1-1311 ESELQNHIQT IHRELVPDSN STQLKTPQVS PMPRISPSQS DEKKTYQCIK ENSTTRP00000005007/1-1335 ESELQNHIQT VHRELVADGN STQLKTPQVS PMPRISPSQS DEKKTYQCIK BACU017852/1-1091 ENELQNHIQT VHRELLPDGN STQLKTPQVS PMPRISPSQS DEKKTYQCIK 1251 1300 bmy_18059T0/1-1264 CQMVFYNEWD IQVHVANHMI --GATSNPKP IPK-FDMDLI IEASL----- ENSBTAP00000045301/1-1311 CQMVFYNEWD IQVHVANHMI DEGLNHECKL CSQTFDSPAK LQCHLIEHSF ENSP00000354794/1-1311 CQMVFYNEWD IQVHVANHMI DEGLNHECKL CSQTFDSPAK LQCHLIEHSF ENSTTRP00000005007/1-1335 CQMVFYNEWD IQVHVANHMI DEGLNHECKL CSQTFDSPAK LQCHLIEHSF BACU017852/1-1091 CQMVFYNEWD IQVHVANHMI DEGLNHECKL CSQTFDSPAK LQCHLIEHSF 1301 1350 bmy_18059T0/1-1264 ---------S IIFTAF---- ---------- -----LYQIT DCVV------ ENSBTAP00000045301/1-1311 EGMGGTFKCP VCFTVFVQAN KLQQHIFSAH GQEDKIYDCT QCPQKFFFQT ENSP00000354794/1-1311 EGMGGTFKCP VCFTVFVQAN KLQQHIFSAH GQEDKIYDCT QCPQKFFFQT ENSTTRP00000005007/1-1335 EGMGGTFKCP VCFTVFVQAN KLQQHIFSAH GQED-IYDCT QCPQKFFFQT BACU017852/1-1091 EGMGGTFKCP VCFTVFVQAN KLQQHIFSAH GQEDKIYDCT QCPQKFFFQT 1351 1400 bmy_18059T0/1-1264 ---------- -- ENSBTAP00000045301/1-1311 ELQNHTMTQH SS ENSP00000354794/1-1311 ELQNHTMTQH SS ENSTTRP00000005007/1-1335 ELQ------- -- BACU017852/1-1091 ELQNHTMTQH SS