KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:51 2014 Check: 00 .. Name: ENSP00000401536/1-473 Len: 624 Check: 1778 Weight: 1.00 Name: ENSBTAP00000045303/1-586 Len: 624 Check: 3999 Weight: 1.00 Name: bmy_11065T0/1-435 Len: 624 Check: 5255 Weight: 1.00 Name: BACU017680/1-541 Len: 624 Check: 7087 Weight: 1.00 // 1 50 ENSP00000401536/1-473 ---------- ---------- ---------- ---------- --MYEIYVET ENSBTAP00000045303/1-586 MAEGVPASPL GGAGSRGLHS GIIQWLVDNF CICEGYSVPR CLMYEIYMET bmy_11065T0/1-435 ---------- ---------- ---------- ---------- ---------- BACU017680/1-541 ---------M GLFRFHGAFQ YTANTLVDNF CICEGYSVPH CLMYEMYVET 51 100 ENSP00000401536/1-473 CGQNTENQVN PATFGK---- ---------- ---------- ---------- ENSBTAP00000045303/1-586 CGQNAQNQVN PAMFGKLVHL VFPDLGTRRL G--------- ---------- bmy_11065T0/1-435 ---------- ---------- ---------- ---------- ---------- BACU017680/1-541 CGQNAQNQVN PATFGKQRRN QPSYWGSENL SPLNRGDTGI GPPPFEKVNG 101 150 ENSP00000401536/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045303/1-586 ---------- -TRGSARYHY DGICIKRSSF FYAQYCYLLG GKRCTSGDIV bmy_11065T0/1-435 ---------- ---------- ---------- ---------- ---------- BACU017680/1-541 GGNRRLSLWH LSKIRVSYHY DGICIKKSSF FYARYCYLLG EKRYHSGDVV 151 200 ENSP00000401536/1-473 ---------- -------CED HSPMKTDPVG SPLSEFRRCP FLEQEQAKKY ENSBTAP00000045303/1-586 AFEKSTNYNR ILQEEGAGDN HSPIKTEPIG SPLSEFRRCP FWEQELAKKY bmy_11065T0/1-435 ---------- -------GAS HSPNKTDPVG SPLSEFRRCP FWEQELAKKY BACU017680/1-541 AFEKSANYNS ILQEEGAGAG RSPNKTDPVG SPLSEFRRCP FWEQELAKKY 201 250 ENSP00000401536/1-473 SCNMMAFLAD EYCNYCRDIL R--------N VEDLLTSFWK SLQQDTVMLM ENSBTAP00000045303/1-586 SYHMVAFLAD EYCNCCQDIL Q--------R VEDLLMSFWK SLQQDTVMLL bmy_11065T0/1-435 SYKTMAFLAD EYCNYCQDIL QNVRNQELER VEDSLTSFWK SLQQDTVMLM BACU017680/1-541 SYKTMAFLAD EYCNYCQDIL QNVRNQELKR VEDSLTSFWK SLQQDTVMLM 251 300 ENSP00000401536/1-473 SLPDVCQLFK CYDVQLYKGI EDVLLHDFLE DVSIQYLKSV QLFSKKFKLW ENSBTAP00000045303/1-586 SLPDVCRLLK CYDVQLYKGI EDVLLHDFLE DVSIQYLKSV RLFSKKFKLW bmy_11065T0/1-435 SLPDVCQLLK CYDRQLYK-- ---------- -----HLESV QSFSKKFKLW BACU017680/1-541 SLPDVCQLPK CYDRQLYKGI EDVLLHDFLE DVSIQHLDSV QSFSKKFQLW 301 350 ENSP00000401536/1-473 LLNALEGVPA LLQISKLKEV TLFVKRLRRK TYLSNMAKTM RMVLKSKRRV ENSBTAP00000045303/1-586 LLSALEGFPA LLQISKLKEV TVFVKRLRRK TYLSNMAKTM RMVLRNSRRV bmy_11065T0/1-435 LLTALEGFPA LLQISKLREV TVFVKRLRRK TYLSNMAKTM RTVLENSRRV BACU017680/1-541 PLTALEGFPA LLQLSKRREV TVFVRRLRRK TYLSNMAKTM RTVLENSRRA 351 400 ENSP00000401536/1-473 SVLKSDLQAI INQGTLATSK KALASDRSGA DELENNPEMK CLRNLISLLG ENSBTAP00000045303/1-586 SVLKSDLCTI FHQGVLDSSQ KVLPRDLSGA DVLGENTEMK CLSSLISLLG bmy_11065T0/1-435 SLLKSDLHAI IRQGALDISE KALRSNPSGT DDLEENTEMK CLSSLISLLG BACU017680/1-541 SLLKSDLHAI IRQGALDISE KALRSNPSGT GDLEENTEMK C--------- 401 450 ENSP00000401536/1-473 TSTDLRVFLS CLSSHLQAFV FQTSRSKEEF TKLAASFQLR WNLLLTAVSK ENSBTAP00000045303/1-586 TSTDLSVFMN CLSSNLQEFV FQPSRSREEF LQLAASFQLR WNFLLTAVSK bmy_11065T0/1-435 TSADLSVFLN CLSSNLQTLV FQPSRSKEEL IRLAASFQLR WNFLLTAVSK BACU017680/1-541 NPLSSAAWLQ CV-------- --PSRSKEEL IRLAASFQLR WNFLLTAVSK 451 500 ENSP00000401536/1-473 AMTLCHRDSF GSWHLFHLLL LEYMIHILQS CLEEEEEEED MGTVKEMLPD ENSBTAP00000045303/1-586 AMTLCHRDSF GSWHLFHLLL SEYVIHILQS CIEEEEEEDN VGSLKEILPD bmy_11065T0/1-435 AMTLWHRDSF GSWHLFHLLL LEYVIHILQS CIEEDEEGGD VGNLKEMLPD BACU017680/1-541 AMTLWHRDSF ---------- ---------- ---------- ---------- 501 550 ENSP00000401536/1-473 DPTLGQPDQA LFHSLNSSLS QACASPSMEP LGVMPTHMGQ GRYPVGVSNM ENSBTAP00000045303/1-586 DQSPVQPDHE PHHPPDCPPA QEHESLSADP PRVMLRCKGQ SPGATAGSSV bmy_11065T0/1-435 DQPLVPPDQE LSRPPDPSPS QERRSPSADP PRVTLRHKSQ SQCATEGSSV BACU017680/1-541 ---------- -----DPSPA QERRSPRADA PRVTLRHKSR GQCTTEGSSV 551 600 ENSP00000401536/1-473 VLRILGFLVD TAMGNKLIQV LLEDETTESA VKLSLPMGQE ALITLKDGQQ ENSBTAP00000045303/1-586 VVRVPGFLVD TVTGNKLIQV LLEDKATEST IKLTLPLGQE TLITLTDGQK bmy_11065T0/1-435 VVRVPGFLVD IVTGDKLIQV LLEDKATEST IKLNLPLEQE TLITLKDGQK BACU017680/1-541 VVRVPGFLLD IATGDKLIQV LLEDKATEST IKLNLPLERE TLITLKDGQK 601 650 ENSP00000401536/1-473 FVIQISDVPQ SSEDIYFREN NANV ENSBTAP00000045303/1-586 FVIHISDVSQ SSEDVYLTES NADT bmy_11065T0/1-435 FVIHVSDVSQ SSENIYLRD- ---- BACU017680/1-541 FVIHVSDVSQ SSENIYFRDS NADT